BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_E03_e117_09.seq (1521 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 82 2e-15 AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 82 2e-15 AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 82 2e-15 AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 82 2e-15 AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 82 2e-15 >X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein L7a protein. Length = 271 Score = 81.8 bits (193), Expect = 2e-15 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +2 Query: 113 KIXNPLFEKRXXNFAIGQDIQPTRDLSCFVRWXKYIRIXRQKAXSQXXXKVPPPI 277 K+ N LFEKR NF IGQ++QP RDLS FVRW KYIR+ RQKA Q KVPPPI Sbjct: 31 KVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPI 85 >AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p protein. Length = 271 Score = 81.8 bits (193), Expect = 2e-15 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +2 Query: 113 KIXNPLFEKRXXNFAIGQDIQPTRDLSCFVRWXKYIRIXRQKAXSQXXXKVPPPI 277 K+ N LFEKR NF IGQ++QP RDLS FVRW KYIR+ RQKA Q KVPPPI Sbjct: 31 KVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPI 85 >AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD, isoform D protein. Length = 271 Score = 81.8 bits (193), Expect = 2e-15 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +2 Query: 113 KIXNPLFEKRXXNFAIGQDIQPTRDLSCFVRWXKYIRIXRQKAXSQXXXKVPPPI 277 K+ N LFEKR NF IGQ++QP RDLS FVRW KYIR+ RQKA Q KVPPPI Sbjct: 31 KVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPI 85 >AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC, isoform C protein. Length = 271 Score = 81.8 bits (193), Expect = 2e-15 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +2 Query: 113 KIXNPLFEKRXXNFAIGQDIQPTRDLSCFVRWXKYIRIXRQKAXSQXXXKVPPPI 277 K+ N LFEKR NF IGQ++QP RDLS FVRW KYIR+ RQKA Q KVPPPI Sbjct: 31 KVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPI 85 >AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA, isoform A protein. Length = 271 Score = 81.8 bits (193), Expect = 2e-15 Identities = 37/55 (67%), Positives = 41/55 (74%) Frame = +2 Query: 113 KIXNPLFEKRXXNFAIGQDIQPTRDLSCFVRWXKYIRIXRQKAXSQXXXKVPPPI 277 K+ N LFEKR NF IGQ++QP RDLS FVRW KYIR+ RQKA Q KVPPPI Sbjct: 31 KVVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPI 85 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,152,532 Number of Sequences: 53049 Number of extensions: 173479 Number of successful extensions: 100 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 100 length of database: 24,988,368 effective HSP length: 88 effective length of database: 20,320,056 effective search space used: 8493783408 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -