Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_D09_e164_07.seq
         (1493 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LU41 Cluster: Repressed by TUP1 protein 1; n=1; Pichi...    38   0.90 
UniRef50_Q10K80 Cluster: Serine carboxypeptidase family protein,...    36   2.1  

>UniRef50_A3LU41 Cluster: Repressed by TUP1 protein 1; n=1; Pichia
           stipitis|Rep: Repressed by TUP1 protein 1 - Pichia
           stipitis (Yeast)
          Length = 263

 Score = 37.5 bits (83), Expect = 0.90
 Identities = 28/102 (27%), Positives = 38/102 (37%)
 Frame = +1

Query: 307 VTEIGKPNITVSCNDQTCTTTKCDINGCRNITCNIYDTDLTGICREYNTIKPEEISPSNK 486
           V+E+    IT SC+D+ CT T   +     +T  + DT  T  C E +T     I P   
Sbjct: 28  VSEVTVITIT-SCSDEVCTLTSVPVTQVSTVTVEVIDTSTTTYCPESDT--SAAIPPQTD 84

Query: 487 PVSEPIQDGLVAEXXXXXXXXXXXLPSTQKDNNPVVDEHPLA 612
            VS  + + L               P T     P   E P A
Sbjct: 85  TVS--VVETLTTTTCPESDTTPAPAPETPAPEAPAAPETPAA 124


>UniRef50_Q10K80 Cluster: Serine carboxypeptidase family protein,
           expressed; n=8; Magnoliophyta|Rep: Serine
           carboxypeptidase family protein, expressed - Oryza
           sativa subsp. japonica (Rice)
          Length = 470

 Score = 36.3 bits (80), Expect = 2.1
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +1

Query: 97  PKSLFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWI-----TYPFTWWYETGQ 255
           P +L   +FL C +H   +    ++DLT G G GS +WG++      + F W+Y++ Q
Sbjct: 10  PLALLALLFL-CLLHGERAA-AADDDLTSGTGDGSELWGYVQVRPKAHLFWWYYKSPQ 65


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,112,973,931
Number of Sequences: 1657284
Number of extensions: 19932568
Number of successful extensions: 40130
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40095
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 158488833675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)