Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_D09_e164_07.seq
         (1493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   7.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   7.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 280 QSSTYGPYEVTEIGKPNITVSCNDQTCTTTKCDIN 384
           +S+ Y P  +  + +P     CN  T T+ +  +N
Sbjct: 190 ESAVYEPVRIMGVHRPGFDNDCNKNTSTSKEIALN 224


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 214  WITYPFTWWYETGQTP 261
            W T P TWW  T  +P
Sbjct: 1035 WTTKPSTWWSSTTTSP 1050


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 408 ITCNVSTAIYVTFSSSTCLVVARYCYI 328
           + C V    ++T +    + V  YCYI
Sbjct: 195 LACGVMVVTHITMAHFKIIQVVPYCYI 221


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 316 IGKPNITVSCNDQTCTTTKCDING 387
           +G   I    ND+ CT T C +NG
Sbjct: 13  LGFSGINCQTNDEDCTETSC-MNG 35


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 503 FKMAWWPRQQRA 538
           FK AWWP  + A
Sbjct: 47  FKFAWWPLTRNA 58


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 503 FKMAWWPRQQRA 538
           FK AWWP  + A
Sbjct: 47  FKFAWWPLTRNA 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,987
Number of Sequences: 336
Number of extensions: 5604
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44759725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)