Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_D09_e164_07.seq
         (1493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    27   1.8  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    26   3.2  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   3.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   5.6  

>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 103 SLFVAIFLTCFIHISLSKPTTEND 174
           +LF+A+ L+ F   SLS PT +ND
Sbjct: 108 NLFLALLLSNFGSSSLSAPTADND 131


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 292 YGPYEVTEIGKPNITVSCNDQTCTTTKCDINGCRNITCN 408
           Y P EV +   P    +C D+TCT  + + + CR  +CN
Sbjct: 61  YDPNEVYDDCGP----ACGDRTCTNQRKNDSACRR-SCN 94


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 3.2
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +2

Query: 386 AVETLHVIFTIPI*QGYVESIIQ*NLKKYLHLTNPYQNRFKMAW 517
           A  +  ++F++PI   Y E +IQ  ++ ++ L   ++ +  M W
Sbjct: 347 AAWSFSILFSLPITYFYEERLIQGKMQCWIDLVEAWRWQLYMCW 390


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 5.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 103  SLFVAIFLTCFIHISLSKPTTEND 174
            +LF+A+ L+ F   SLS PT +N+
Sbjct: 1023 NLFLALLLSNFGSSSLSAPTADNE 1046


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,188,371
Number of Sequences: 2352
Number of extensions: 22331
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 174749850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)