Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_D09_e164_07.seq
         (1493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95425-1|CAA64700.1| 1037|Homo sapiens EHK-1 receptor tyrosine k...    34   1.5  
L36644-1|AAA74245.1|  991|Homo sapiens receptor protein-tyrosine...    34   1.5  
AB209375-1|BAD92612.1| 1017|Homo sapiens ephrin receptor EphA5 i...    34   1.5  

>X95425-1|CAA64700.1| 1037|Homo sapiens EHK-1 receptor tyrosine
           kinase protein.
          Length = 1037

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +1

Query: 106 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 285
           L+  + L   +   L+ P+ E +L + R +   + GWI +P   W E G+  V++     
Sbjct: 40  LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 96

Query: 286 STYGPYEVTEIGKPN 330
            TY   +V E  + N
Sbjct: 97  HTYQVCKVMEQNQNN 111


>L36644-1|AAA74245.1|  991|Homo sapiens receptor protein-tyrosine
           kinase protein.
          Length = 991

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +1

Query: 106 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 285
           L+  + L   +   L+ P+ E +L + R +   + GWI +P   W E G+  V++     
Sbjct: 16  LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 72

Query: 286 STYGPYEVTEIGKPN 330
            TY   +V E  + N
Sbjct: 73  HTYQVCKVMEQNQNN 87


>AB209375-1|BAD92612.1| 1017|Homo sapiens ephrin receptor EphA5
           isoform a variant protein.
          Length = 1017

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +1

Query: 106 LFVAIFLTCFIHISLSKPTTENDLTEGRGIGSTIWGWITYPFTWWYETGQTPVNDQLVQS 285
           L+  + L   +   L+ P+ E +L + R +   + GWI +P   W E G+  V++     
Sbjct: 53  LWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDL-GWIAFPKNGWEEIGE--VDENYAPI 109

Query: 286 STYGPYEVTEIGKPN 330
            TY   +V E  + N
Sbjct: 110 HTYQVCKVMEQNQNN 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,321,799
Number of Sequences: 237096
Number of extensions: 3183852
Number of successful extensions: 4737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4734
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22142890136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)