BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_D08_e156_08.seq (1513 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46161| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 1e-36 SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 30 4.2 SB_46399| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.2 SB_43487| Best HMM Match : K-box (HMM E-Value=0.79) 30 5.6 SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.6 SB_5539| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.033) 29 9.7 >SB_46161| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 151 bits (366), Expect = 1e-36 Identities = 67/97 (69%), Positives = 83/97 (85%) Frame = +3 Query: 81 LLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLYPAFADTREYKLVKELIEHLEEQNV 260 +LKYSAK+Y F+AALCH+CVD+L AQ A+EKY ++ AF D+RE KL++ L+E EEQNV Sbjct: 159 ILKYSAKDYFFKAALCHMCVDVLEAQRAVEKYCDMHAAFQDSRECKLLRSLLEAQEEQNV 218 Query: 261 DAFTEAVKTYDSISRLDQWYTTMLVRIKKQINDNPDL 371 +AFTEAVK YDSISR+DQW TTML+RIKK +NDNPDL Sbjct: 219 EAFTEAVKEYDSISRIDQWLTTMLLRIKKSMNDNPDL 255 >SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) Length = 567 Score = 30.3 bits (65), Expect = 4.2 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = +3 Query: 72 HEGLLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLYPAFADTRE-YKLVKELIEHLE 248 +E ++ + Y A +L N Q ALE Y G++ F D E K + + L Sbjct: 345 YEKAREFYQEAYNVEATCTEALFNLGNYQQALETYKGIHQKFPDNVECLKFLVRICTDLG 404 Query: 249 EQNVDAFTEAVKTYDSISRLDQ 314 ++V + + +K + L Q Sbjct: 405 LKDVQEYAQKLKKAEKARELKQ 426 >SB_46399| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 30.3 bits (65), Expect = 4.2 Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 7/88 (7%) Frame = +3 Query: 57 LQXIRHEGLLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLY-------PAFADTREY 215 LQ + + L++ S + AL + L+ +QH L++++ A +DT E+ Sbjct: 193 LQPVIEQSLMQQSEIGVISTMALMRRNLSLITSQHLLKEFSMFLLGESKKPEAMSDTGEH 252 Query: 216 KLVKELIEHLEEQNVDAFTEAVKTYDSI 299 KL ++LIE + + + E +K ++++ Sbjct: 253 KLRQKLIELCDHLSDELSIETLKLFETL 280 >SB_43487| Best HMM Match : K-box (HMM E-Value=0.79) Length = 243 Score = 29.9 bits (64), Expect = 5.6 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +3 Query: 210 EYKLVKELIEHLEEQNVDAFTEAVKTYDSISRLDQWYTTMLVRIKKQINDN 362 E ++ELI+ LEE V + V Y+ +S+ D+ YT+ + IN+N Sbjct: 167 ELDKLQELIDQLEEA-VKTKEDKVYGYEQVSQRDEDYTSKDINNNNNINNN 216 >SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2670 Score = 29.9 bits (64), Expect = 5.6 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Frame = +3 Query: 147 LNAQHALEKYAGLYPAFADTREYKLVKELIEH--LEEQNVDAFTEAVKTYDSISRLDQWY 320 +N Q L+ YAG+YP D EY ++ +E L + +V + ++ YD ++ Sbjct: 2068 INQQDILKVYAGVYP--VDQSEYVFLRNALEKLTLNDASVTSHPDSCFDYDD----HGYH 2121 Query: 321 TTMLVRIKKQIN 356 T +VR+ IN Sbjct: 2122 ATRIVRMDILIN 2133 >SB_5539| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.033) Length = 551 Score = 29.1 bits (62), Expect = 9.7 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = -1 Query: 130 WQSAALNMYSLALYFNRPSCRIXCSPGXYH*XLERPPPR 14 W L Y + Y+ R CSPG LERPPPR Sbjct: 408 WYEFLLVSYGINAYWYRMVSSNSCSPGD-PLVLERPPPR 445 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 30,401,001 Number of Sequences: 59808 Number of extensions: 530485 Number of successful extensions: 986 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 902 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 986 length of database: 16,821,457 effective HSP length: 85 effective length of database: 11,737,777 effective search space used: 4906390786 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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