BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_D08_e156_08.seq
(1513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09374-1|AAA83414.1| 292|Drosophila melanogaster soluble NSF at... 164 2e-40
AY069477-1|AAL39622.1| 292|Drosophila melanogaster LD21601p pro... 164 2e-40
AE014296-3323|AAF49035.1| 292|Drosophila melanogaster CG6625-PA... 164 2e-40
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 30 7.2
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 30 7.2
AF045776-1|AAC23965.1| 354|Drosophila melanogaster titin protein. 30 9.6
>U09374-1|AAA83414.1| 292|Drosophila melanogaster soluble NSF
attachment protein protein.
Length = 292
Score = 164 bits (399), Expect = 2e-40
Identities = 75/98 (76%), Positives = 87/98 (88%)
Frame = +3
Query: 81 LLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLYPAFADTREYKLVKELIEHLEEQNV 260
LLKYSAKEY FRAALCHL VDLLNAQHA+EKYA YPAF D+RE+KL+K L E+LEEQN+
Sbjct: 195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNI 254
Query: 261 DAFTEAVKTYDSISRLDQWYTTMLVRIKKQINDNPDLR 374
+ FTEAVK YDSISRLDQWYTT+L+RIKK +++PDLR
Sbjct: 255 EGFTEAVKDYDSISRLDQWYTTILLRIKKAADEDPDLR 292
>AY069477-1|AAL39622.1| 292|Drosophila melanogaster LD21601p
protein.
Length = 292
Score = 164 bits (399), Expect = 2e-40
Identities = 75/98 (76%), Positives = 87/98 (88%)
Frame = +3
Query: 81 LLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLYPAFADTREYKLVKELIEHLEEQNV 260
LLKYSAKEY FRAALCHL VDLLNAQHA+EKYA YPAF D+RE+KL+K L E+LEEQN+
Sbjct: 195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNI 254
Query: 261 DAFTEAVKTYDSISRLDQWYTTMLVRIKKQINDNPDLR 374
+ FTEAVK YDSISRLDQWYTT+L+RIKK +++PDLR
Sbjct: 255 EGFTEAVKDYDSISRLDQWYTTILLRIKKAADEDPDLR 292
>AE014296-3323|AAF49035.1| 292|Drosophila melanogaster CG6625-PA
protein.
Length = 292
Score = 164 bits (399), Expect = 2e-40
Identities = 75/98 (76%), Positives = 87/98 (88%)
Frame = +3
Query: 81 LLKYSAKEYMFRAALCHLCVDLLNAQHALEKYAGLYPAFADTREYKLVKELIEHLEEQNV 260
LLKYSAKEY FRAALCHL VDLLNAQHA+EKYA YPAF D+RE+KL+K L E+LEEQN+
Sbjct: 195 LLKYSAKEYFFRAALCHLSVDLLNAQHAIEKYAQQYPAFQDSREFKLIKVLCENLEEQNI 254
Query: 261 DAFTEAVKTYDSISRLDQWYTTMLVRIKKQINDNPDLR 374
+ FTEAVK YDSISRLDQWYTT+L+RIKK +++PDLR
Sbjct: 255 EGFTEAVKDYDSISRLDQWYTTILLRIKKAADEDPDLR 292
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 201 DTREYKLVKELIEHLEEQNVDAFTEAVKTYDSISRLDQWYTTMLVRIK 344
+ E + ++E ++H EE V+ E +TY S +++ T L+R K
Sbjct: 7374 EIEEEEEIEEKVQHDEEDEVEVQVEQKETYTSSKKIEITKTVELIRTK 7421
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 201 DTREYKLVKELIEHLEEQNVDAFTEAVKTYDSISRLDQWYTTMLVRIK 344
+ E + ++E ++H EE V+ E +TY S +++ T L+R K
Sbjct: 7374 EIEEEEEIEEKVQHDEEDEVEVQVEQKETYTSSKKIEITKTVELIRTK 7421
>AF045776-1|AAC23965.1| 354|Drosophila melanogaster titin protein.
Length = 354
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 201 DTREYKLVKELIEHLEEQNVDAFTEAVKTYDSISRLDQWYTTMLVRIK 344
+ E + ++E ++H EE V+ E +TY S +++ T L+R K
Sbjct: 156 EIEEEEEIEEKVQHDEEDEVEVQVEQKETYTSSKKIEISKTVELIRTK 203
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,752,367
Number of Sequences: 53049
Number of extensions: 729131
Number of successful extensions: 1554
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8432823240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -