BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_D08_e156_08.seq (1513 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 3.9 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 3.9 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 6.9 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.8 bits (49), Expect = 3.9 Identities = 15/58 (25%), Positives = 26/58 (44%) Frame = -3 Query: 185 QTRVLLECVLRVQQVDTEVAERRPEHVLFSAVLQQTLVPNXLQPGGIPLVXRAAATAG 12 + R + +C++R + DT A + +L + + LQPG P V + AG Sbjct: 392 EDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPG--PAVSLKCSAAG 447 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 23.8 bits (49), Expect = 3.9 Identities = 15/58 (25%), Positives = 26/58 (44%) Frame = -3 Query: 185 QTRVLLECVLRVQQVDTEVAERRPEHVLFSAVLQQTLVPNXLQPGGIPLVXRAAATAG 12 + R + +C++R + DT A + +L + + LQPG P V + AG Sbjct: 392 EDRGMYQCIVRRSEGDTAQASAELQLGNAPPMLLYSFIEQTLQPG--PAVSLKCSAAG 447 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 23.0 bits (47), Expect = 6.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 249 EQNVDAFTEAVKTYDSISRLD 311 E D +T+ V+ DS+ RLD Sbjct: 465 EVRYDPYTQRVEILDSVDRLD 485 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 292,626 Number of Sequences: 438 Number of extensions: 6060 Number of successful extensions: 19 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 52874250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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