Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_D07_e148_07.seq
(1537 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 40 0.001
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 40 0.001
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 38 0.003
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 38 0.003
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 38 0.003
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 34 0.045
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 33 0.079
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 32 0.24
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 32 0.24
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 31 0.32
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.32
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.32
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.42
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.56
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 30 0.74
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 30 0.98
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 29 1.7
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 1.7
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 28 3.0
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 28 3.9
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 27 6.9
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 27 9.1
SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 9.1
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +1
Query: 229 AEGAEQKARQLRQDFKRTNSSLAERVSQTSNTR---ERAQLLLNRATKLASDTQMQLKLL 399
AE A Q+A + +Q+ + + + E +++ + R E+ + +N A KLA + + + L
Sbjct: 583 AELAAQRALKQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAEELKAKGGLE 642
Query: 400 ANMEDLYNDHNDQLNLLE-KEIGDLNTQMNYYLSEITKRSDN 522
N EDL + D+L ++ +++ N MN L I KR D+
Sbjct: 643 VNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDH 684
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 39.5 bits (88), Expect = 0.001
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 4/163 (2%)
Frame = +1
Query: 100 KANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKR 279
K ++D LRL S L I + + ++ +E N + L A KA
Sbjct: 443 KLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKNSDKA------LAE 496
Query: 280 TNSSLAERVSQTSNTRERAQLLLNRATKLASDTQ-MQLKL--LANMED-LYNDHNDQLNL 447
TN L E + R + LN L + + + LK+ + +D L N+ ++
Sbjct: 497 TNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIKS 556
Query: 448 LEKEIGDLNTQMNYYLSEITKRSDNYRSCTT*IKSKDNLFNEF 576
E + +LN ++ Y +++ + + Y + KDN F
Sbjct: 557 YEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRRF 599
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 85 NWRSKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLR 264
N R K N ++D L+ R DL+ +LK+E + + + A + E + ++
Sbjct: 220 NKRELKMNGKEDD---LKKREKDLENRLLKVEEHEKSLNERATKLSEANENFNNRFKEFE 276
Query: 265 QDFK---RTNSSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANMEDLY 420
+ K + N + S+T+N + L+N K SD ++ +LL + Y
Sbjct: 277 EREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIALEKQLLEEAVERY 331
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 38.3 bits (85), Expect = 0.003
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Frame = +1
Query: 94 SKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDF 273
S++ N+ + + L+ RL L++ K + D+ + ++++ + + E + LR++
Sbjct: 612 SERYNDKCHEFDELQKRLQTLEEENNKAKEDSTS---KTSNLLEQLKMTEAEVDSLRKEN 668
Query: 274 KRTNSSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKL---------------LANM 408
+ +A + S+ + + +LLLN + +D QLK L+N+
Sbjct: 669 EENKQVIALKESELVKSNDN-KLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNL 727
Query: 409 EDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEITKRSDNYRSCTT*IKSKDNLFNEFVLKQ 588
++ +ND D LN +E + + + SEI +R++ Y + S N E KQ
Sbjct: 728 KERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQ 787
Query: 589 ILY 597
+ +
Sbjct: 788 VTH 790
Score = 37.1 bits (82), Expect = 0.006
Identities = 24/120 (20%), Positives = 56/120 (46%)
Frame = +1
Query: 145 LSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQTSNT 324
+S ++ + K+ + Q+ + ND + +++ + L ++ N + + S+TSN
Sbjct: 594 ISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEE---NNKAKEDSTSKTSNL 650
Query: 325 RERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEI 504
E+ ++ L + + +++A E ND LL ++I LN Q++ +E+
Sbjct: 651 LEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEM 710
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 38.3 bits (85), Expect = 0.003
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Frame = +1
Query: 136 RLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQT 315
R L + N+L + + K + +V R + A ++ ++++++F+R + L E Q
Sbjct: 99 RKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQQQL 158
Query: 316 SNTRERAQLLLNRATKLASDTQMQLKLL-ANMEDLYNDHNDQLNLLEKEIGDLNTQMNYY 492
ER + RA + Q + L E+L N+ L+ EI L
Sbjct: 159 KLEIERLEAETERANSETEQYEKQKEALEEEYEELRNECLKHDPQLDAEIRTLQDTFEEV 218
Query: 493 LSEITKRSDNYRSCTT*IKSKDNLFN 570
+TK+ + + + KD++FN
Sbjct: 219 ERTLTKQVSDAKIADKPL--KDSMFN 242
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 34.3 bits (75), Expect = 0.045
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 115 KEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSL 294
K+ V RLRL + K I K + + +Q + AE + L++DF NS
Sbjct: 830 KQRVSDTRLRLERMHKFIEKDQESIDNYEQNREALESEVATAEAELELLKEDFASENSKT 889
Query: 295 AERVSQTSNTRERAQLLLNRATKLASD 375
+ + S + + L++ TKL+ +
Sbjct: 890 EKILLAASEKKLVGKRLVSELTKLSGN 916
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 109 ETKEDVEGLRLRLSDLQKNIL-KIESDAEQVK--QEANDVVLRAEG-AEQKARQLRQDFK 276
E KE+ EGLR L N+L K+++ +K ++ D + G E K + L +
Sbjct: 378 EDKEEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVS 437
Query: 277 RTNSSLAERVSQTSNTRERAQL 342
++ A+ +++ + E +L
Sbjct: 438 SLDTERADLLAKINEKIESLEL 459
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 33.5 bits (73), Expect = 0.079
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 118 EDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGA----EQKARQLRQDFKRTN 285
+D+EG R + +L+ S+ ++ E ND+ E E + +L + N
Sbjct: 84 QDLEGFREFMENLEHRYEMTVSEVRRLSHEVNDLQTDRENLKHQFEDQIEKLNSEISNQN 143
Query: 286 SSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANMED 414
S + ++ + + +R L + L S ++ +++++++D
Sbjct: 144 SLILQKKDELEKSIQRCSELEEKINSLESAQSIEQEVISSLKD 186
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 31.9 bits (69), Expect = 0.24
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Frame = +1
Query: 151 DLQKNILKIESDAEQVKQEANDVVLRAEGAEQK--ARQLRQDFKRTNSSLAERVSQTSNT 324
+L+ + ++D + K++A + L+ E +Q+ ++ +D TN+SL + T
Sbjct: 812 NLRPLLSSTQNDKQLKKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLT--AVENLLT 869
Query: 325 RERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEI 504
ERA + L++ ++ TQ +L AN+ED +++ Q L++E L N SE+
Sbjct: 870 TERA-IALDKE-EILRRTQERL---ANIEDSFSETKQQNENLQRESASLKQINNELESEL 924
Query: 505 TKRS 516
+++
Sbjct: 925 LEKT 928
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 31.9 bits (69), Expect = 0.24
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Frame = +1
Query: 115 KEDVEGLRLRLSDLQKNILKIESDAEQVKQEA-------NDVVLRAEGAEQKA---RQLR 264
KE E + LR+ + K I I S E++ QE +++ E EQ+ R L
Sbjct: 215 KERAEKIELRVHESLKRISCIRSKVEELDQEITETARLQDELFKSTEEYEQQMITIRHLE 274
Query: 265 QDFKRTNSSLAERVSQTSNTRERAQ----LLLNRATKLASDTQMQLKLLANMEDLYNDHN 432
N+++ + SQ + T E ++ L N A K+ + ++ L DL +
Sbjct: 275 SQSDIINTTINDLKSQMTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLK 334
Query: 433 DQLNLLEKEIGDL 471
+ LLEK GDL
Sbjct: 335 SRRELLEKLTGDL 347
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 31.5 bits (68), Expect = 0.32
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +1
Query: 97 KKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFK 276
+K E E L+LRL+ ++K ++E + ++E +V E + K +L
Sbjct: 87 RKLAEEHEQKNSLQLRLTLVEK---QLEEQSTSYQKEIEEVRNEKEATQVKIHELLDAKW 143
Query: 277 RTNSSLA---ERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNL 447
+ + L E+ Q + + ++ N+A ++ DT L N+E L+ D +QL
Sbjct: 144 KEIAELKTQIEKNDQALSEKNHEVMVSNQALQM-KDTN-----LTNLEKLFADSREQLET 197
Query: 448 LEKEIGDLNTQM 483
KE+ Q+
Sbjct: 198 KCKELAAAEQQL 209
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.5 bits (68), Expect = 0.32
Identities = 32/161 (19%), Positives = 75/161 (46%)
Frame = +1
Query: 91 RSKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQD 270
+++ A + E++ + +L DL+ + +S+ +Q+++E VLR EG E + + ++
Sbjct: 650 QTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEEMQ--VLR-EGHESEIKDFIEE 706
Query: 271 FKRTNSSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLL 450
+ L + +Q + + LL+ K S L + + L ND LNLL
Sbjct: 707 HSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLEND----LNLL 762
Query: 451 EKEIGDLNTQMNYYLSEITKRSDNYRSCTT*IKSKDNLFNE 573
+++ N + + I + + ++ + +K+N+ ++
Sbjct: 763 TEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISD 803
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/107 (17%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 94 SKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGA-EQKARQLRQD 270
++K + ++D+E S L K + ++S+ + +K +ND + + +K +++ Q
Sbjct: 882 TEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQA 941
Query: 271 FKRTNSSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANME 411
N L R + + L N + + S + ++++E
Sbjct: 942 LAEANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSDNRTISDLE 988
Score = 27.5 bits (58), Expect = 5.2
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 175 IESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRT---NSSLAERVSQTSNTRERAQLL 345
IE ++ KQ +D+ + K R L + +++ N+SLA S+ LL
Sbjct: 704 IEEHSKLTKQ-LDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLL 762
Query: 346 LNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMN 486
+ K +DT+ + E ND L E I DL +++
Sbjct: 763 TEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLS 809
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.5 bits (68), Expect = 0.32
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = +1
Query: 142 RLSDLQKNILKIESDAEQVKQEANDVVLRAE-GAEQKARQLRQDFK-----RTNSSLA-- 297
++ +L+K + K+ + ++ E N+ L+AE GA+ + L +++ R S L
Sbjct: 1289 KIQELEKEVEKLNASLNPLQTEINE--LKAEIGAKTASLNLMKEYNSRWKLRFQSVLNKY 1346
Query: 298 ERV--SQTSNTRERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDL 471
ERV +Q ++ + L +L + Q K + N N+++ L+KE+
Sbjct: 1347 ERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQA 1406
Query: 472 NTQMNYYLSEITKRSDNYR 528
NT+ + ++ +N +
Sbjct: 1407 NTKNTRLAAAWNEKCENLK 1425
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.42
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +1
Query: 181 SDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQTSNTRERAQLLLNRAT 360
SD +++K+E + V+ + E + + A + S L +R Q S E A+L A
Sbjct: 341 SDYDEIKRELS-VLKQIEFSGEHATHENTSLE---SQLLKREKQLSE--ELAKLRSTNA- 393
Query: 361 KLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEITKRSD 519
+L + K + +E ++ + + LEK++ D++ + + YLS T R +
Sbjct: 394 QLTDRITQESKKASFLEQKASEQEEVIRKLEKDLADVDVEGSVYLSNTTYRRE 446
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.56
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 91 RSKKANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQD 270
R K+ E ++ + +LR + +K K + E++++E R EQ+ R+ +D
Sbjct: 97 RLKREKERQQREQEKKLR--EQEKIAAKKMKELEKLEKE------RIRLQEQQRRKEERD 148
Query: 271 FKRTNSSLAERVSQTSN-TRERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNL 447
K A+R+ Q +ER QL LN T+ K +A E+ D D+LN
Sbjct: 149 QKLREKEEAQRLRQEQILNKERQQLKLNNFF-----TKGVEKRIAPNENFVADKTDELNE 203
Query: 448 LEKE 459
EKE
Sbjct: 204 FEKE 207
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 30.3 bits (65), Expect = 0.74
Identities = 24/94 (25%), Positives = 39/94 (41%)
Frame = +1
Query: 157 QKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQTSNTRERA 336
+KN+ I+ E L+ E +K QLR +S LA+ + S R
Sbjct: 144 KKNVSSIDVSMVSDSSEFKPDSLQHEKLVKKCNQLRLQKLINSSELAQIDLELSKLYSRR 203
Query: 337 QLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQ 438
+ +L R +K+ LA++E L D + Q
Sbjct: 204 RQVLERLSKIEEQNLKYTSKLASVEKLMLDSDAQ 237
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 29.9 bits (64), Expect = 0.98
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Frame = +1
Query: 76 RGXNWRSKKANETK-EDVEGL---RLRLSDLQKNILKIESDAEQVKQEAN----DVVLRA 231
+ W A E+K D GL ++ +S L+ L ES + Q+ + ++VL+
Sbjct: 339 KSSGWTGSSATESKLRDKMGLEYTQILVSQLESQRLYYESHLSNMSQKLSRVNEELVLKT 398
Query: 232 EGAEQKAR---QLRQDFKRTNSSLAERVSQTSNTRERAQLLLNRATKLASDTQMQLKLLA 402
+ A + LR + S L +R + + + L + + S + L +
Sbjct: 399 KIATASSNANTDLRSRVDISESKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENLLVRIQ 458
Query: 403 NMEDLYNDHNDQLNLLEKEIGDLNTQM 483
+E +DQ+ ++ +I DLN Q+
Sbjct: 459 TLEKQNTTKSDQIVSMQFQINDLNEQL 485
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/117 (21%), Positives = 48/117 (41%)
Frame = +1
Query: 172 KIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQTSNTRERAQLLLN 351
K+++ V N ++ A A LR D S + + Q++ E L+
Sbjct: 11 KLDNLGLSVTSRRNQILFYLSKALNLAHLLRSD--SLQKSFLDALKQSATDSELLHKNLD 68
Query: 352 RATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEITKRSDN 522
L ++ KLL ++ ND+ ++ LE +I D ++N S++ + N
Sbjct: 69 EIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEINSLNSQLQIQKSN 125
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 29.1 bits (62), Expect = 1.7
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Frame = +1
Query: 133 LRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQ 312
L L+ LQK + EQV E+ E + +QL+ + +LA+ Q
Sbjct: 578 LEATLNALQKQNKQKGEVLEQVVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQ 637
Query: 313 TSNTRERAQLLLNRATKLASDTQMQLKL--------LANMEDLYNDHNDQLNLLEKEIGD 468
+R + L+ +K S ++ L+ LA + Y++H+ QL ++E+
Sbjct: 638 LDEMTQRL-VSLDEESKAVSQRKLDLEYKINNSKTQLATATEEYHEHSKQLEAEKQELSK 696
Query: 469 L 471
L
Sbjct: 697 L 697
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 28.3 bits (60), Expect = 3.0
Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +1
Query: 100 KANETKEDVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKR 279
+A + + D + ++L+ + ++E + +++Q + RAE E+ R+LR+D
Sbjct: 34 EAFKNERDHNLWEIERAELKIRVAQLERERAKLEQSLSFQQRRAEMLEKSLRELRKDKNI 93
Query: 280 TNSSLAE----RVSQTSNTRERAQLLLNRATKLASDTQMQLKLLANME 411
+ L E +NT+ A+ L ++ + ++ L NM+
Sbjct: 94 SVKDLDEFHLLDKPAANNTKADAEACLLKSKNYIKKSLQEIVYLTNMQ 141
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/113 (16%), Positives = 48/113 (42%)
Frame = +1
Query: 148 SDLQKNILKIESDAEQVKQEANDVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQTSNTR 327
S Q+ I K + E+ +Q+ + + + + LRQ +++TN +++ ++
Sbjct: 457 SHYQELITKFSVEKEKAEQKYFLTMKSTDSLHAEVKLLRQKYQKTNEIISKMLNSQDTAV 516
Query: 328 ERAQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMN 486
R ++ +L+S +K + + + LE+++ L M+
Sbjct: 517 HRIIEFEDQLARLSSVRNNSIKQSTTFQVKKSSQKSTIQNLEEKVSYLQQFMD 569
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 6.9
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Frame = +1
Query: 163 NILKIESDAEQVKQEAN--DVVLRAEGAEQKARQLRQDFKRTNSSLAERVSQ-TSNTRER 333
N LK S A+ + Q+ + V + + + A V Q TS+ ER
Sbjct: 449 NTLKFASRAQNLPQDIRQAEAVTNVQAELASLHSALEKNAQEVEYYASLVKQLTSDLEER 508
Query: 334 AQLLLNRATKLASDTQMQLKLLANMEDLYNDHNDQLNLLEKEIGDLNTQMNYYLSEITKR 513
+ + + T + L ME+L +DHN ++ L E+ D Q+ Y L K+
Sbjct: 509 DTYIAMLEAERSQGTAISRARL-RMEELLSDHNFEIADLRDELQD-KEQIIYALRYAQKQ 566
Query: 514 SD 519
D
Sbjct: 567 RD 568
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 121 DVEGLRLRLSDLQKNILKIESDAEQVKQEANDVVLRAE--GAEQKA 252
D+E LRL+L LQ+ + + +Q+ Q + D+V+ + EQK+
Sbjct: 429 DLETLRLQLQALQEELRVEREERQQLIQMSEDLVIAMDQLNLEQKS 474
>SPBC83.19c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 119
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 163 FSANLRDVNVNLQHLLLFHW 104
+ AN + +NLQH+ L+H+
Sbjct: 21 WKANFESIRINLQHMHLYHY 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,683,703
Number of Sequences: 5004
Number of extensions: 51453
Number of successful extensions: 166
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 862245690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -