Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_D02_e108_08.seq
(1486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 130 7e-29
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 101 4e-20
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 98 4e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 5e-16
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 80 2e-13
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 79 2e-13
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 79 4e-13
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 66 2e-09
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 66 2e-09
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 65 5e-09
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 65 5e-09
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 64 9e-09
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 64 9e-09
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 62 3e-08
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 5e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 62 5e-08
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 58 4e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 58 8e-07
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 56 2e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 56 2e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 54 7e-06
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 52 3e-05
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 52 4e-05
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 50 2e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 49 4e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 48 5e-04
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 48 6e-04
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 47 0.001
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 46 0.002
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 42 0.031
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 41 0.072
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.095
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 39 0.38
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 1.2
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 37 1.6
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 36 2.7
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 2.7
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 36 3.6
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 4.7
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 35 6.3
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 130 bits (315), Expect = 7e-29
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 351 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 101 bits (243), Expect = 4e-20
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = +3
Query: 156 RITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGIN 335
R T ++ A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGIN
Sbjct: 6 RETSQVKITAIASCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGIN 63
Query: 336 VRDLITNIGSGV 371
V+DLITNIGSGV
Sbjct: 64 VKDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 98.3 bits (234), Expect = 4e-19
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 351 TNIGSG---VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
N+G+G DDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 5e-16
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3
Query: 198 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 365
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 79.8 bits (188), Expect = 2e-13
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLIT 353
SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 2 SKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLM 61
Query: 354 NIGS 365
++GS
Sbjct: 62 SMGS 65
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 79.4 bits (187), Expect = 2e-13
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +3
Query: 177 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 356
S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI N
Sbjct: 2 STSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMN 61
Query: 357 IGSG 368
+G+G
Sbjct: 62 VGAG 65
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 78.6 bits (185), Expect = 4e-13
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +3
Query: 177 SKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLIT 353
S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 2 SAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLL 61
Query: 354 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
N+GSG DDDMGFGLFD
Sbjct: 62 NVGSG-GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 66.5 bits (155), Expect = 2e-09
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 273 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGV 371
A VD+EPYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 66.1 bits (154), Expect = 2e-09
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 365
EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL NV D++ G+
Sbjct: 16 ELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 66.1 bits (154), Expect = 2e-09
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDL 347
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 348 ITNIGS 365
+T + S
Sbjct: 61 LTEVAS 66
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 64.9 bits (151), Expect = 5e-09
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPN-XCXALNGQWQ 833
LAVVLQRRDWENPGVTQLNRLAAHPPF A R+ P+ +LNG+W+
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPF---ASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 64.9 bits (151), Expect = 5e-09
Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPN-XCXALNGQWQ 833
LAVVLQRRDWENPGVTQLNRLAAHPPF A R+ P+ +LNG+W+
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPF---ASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 64.1 bits (149), Expect = 9e-09
Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPN-XCXALNGQWQ 833
LAVVLQRRDWENPGVTQLNRLAAHPPF A R+ P+ LNG+W+
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPF---ASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 64.1 bits (149), Expect = 9e-09
Identities = 37/108 (34%), Positives = 55/108 (50%)
Frame = +3
Query: 180 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 359
+ EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++ L++ +
Sbjct: 14 REELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSAV 73
Query: 360 GSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
GSG D+DMGF LFD
Sbjct: 74 GSGAAAAPAAASASSAAAPEESAKKEEKKEEEEE----DEDMGFSLFD 117
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 62.5 bits (145), Expect = 3e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPF 749
LAVVLQRRDWENPGVTQLNRLAAHPPF
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPF 48
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 5e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 332
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 61.7 bits (143), Expect = 5e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 667 HWPSFYNVVTGKTLALPNLIALQHIP 744
HWPSFYNVVTGKTLALPNLIALQHIP
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIP 30
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 58.4 bits (135), Expect = 4e-07
Identities = 36/106 (33%), Positives = 48/106 (45%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 365
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
Query: 366 GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
DDDMGFGLFD
Sbjct: 64 A---PAAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 57.6 bits (133), Expect = 8e-07
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 183 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 359
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 360 GS 365
GS
Sbjct: 77 GS 78
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 56.0 bits (129), Expect = 2e-06
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +3
Query: 180 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 359
K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++N+
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNL 73
Query: 360 GSG 368
G
Sbjct: 74 SVG 76
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 56.0 bits (129), Expect = 2e-06
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 365
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 54.4 bits (125), Expect = 7e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 183 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 362
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 363 SG 368
G
Sbjct: 63 LG 64
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 52.4 bits (120), Expect = 3e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 365
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 52.0 bits (119), Expect = 4e-05
Identities = 33/111 (29%), Positives = 47/111 (42%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350
M+SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 351 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
+ + G DDDMGFGLFD
Sbjct: 60 SKVSFG-GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 49.6 bits (113), Expect = 2e-04
Identities = 28/101 (27%), Positives = 46/101 (45%)
Frame = +3
Query: 201 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXX 380
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++ +
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA--GP 65
Query: 381 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
DDDMGFGLFD
Sbjct: 66 VAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 48.8 bits (111), Expect = 4e-04
Identities = 33/105 (31%), Positives = 44/105 (41%)
Frame = +3
Query: 189 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 368
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L + +
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEAL---MAAA 62
Query: 369 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
DDDMGFGLFD
Sbjct: 63 ATQAPTATSAAAAPAAGEASGKAEEKKKEEPEEEGDDDMGFGLFD 107
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 48.4 bits (110), Expect = 5e-04
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +3
Query: 177 SKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN 356
S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 2 SAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMAA 61
Query: 357 IGS-GVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
+ DDDMGFGLFD
Sbjct: 62 AAAQAPTAASAPSPAAGAASAAAAGGKVEDKKKDEPEEEGDDDMGFGLFD 111
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 48.0 bits (109), Expect = 6e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +3
Query: 180 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 329
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 46.8 bits (106), Expect = 0.001
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPNXCXALNGQW 830
L +L RRDWENP +TQ +RL AHPPF + R + LNG W
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQ--QTLNGLW 66
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 46.4 bits (105), Expect = 0.002
Identities = 33/107 (30%), Positives = 43/107 (40%)
Frame = +3
Query: 183 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 362
A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++ +I
Sbjct: 4 AQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLGSIS 62
Query: 363 SGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503
G DDDMGFGLFD
Sbjct: 63 FG-GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDMGFGLFD 108
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 42.3 bits (95), Expect = 0.031
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 669 LAVVLQRRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPNXCXALNGQWQ 833
LA +L R DW+NP +T +NRL +H P + R + +L+G+WQ
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR--ARRGEPSDAVLSLDGEWQ 70
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 41.1 bits (92), Expect = 0.072
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDL 347
M+ + AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + +
Sbjct: 1 MSLLSHQACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIAST 60
Query: 348 ITNIGS 365
I N GS
Sbjct: 61 IANGGS 66
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.095
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 186 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 299
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 38.7 bits (86), Expect = 0.38
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 VLQRRDWENPGVTQLNRLAAHPPFRQLA*LA-KRPGTRSAXPNXCXALNGQW 830
++ RRDWENP Q+N++ AH P + R T+S +LNGQW
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK----KSLNGQW 54
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 1.2
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 616 RGGARYPIRPIVSRIT 663
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 36.7 bits (81), Expect = 1.6
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 678 VLQRRDWENPGVTQLNRLAAHPPF 749
VL R DW N +T LNRL AHP F
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVF 40
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 35.9 bits (79), Expect = 2.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 687 RRDWENPGVTQLNRLAAHPPFRQLA*LAKRPGTRSAXPNXCXALNGQWQ 833
+ DWENP V Q+NRL A ++ TR + +LNGQW+
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFD-TPEQALTRDRNQSTIQSLNGQWK 78
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 2.7
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 678 VLQRRDWENPGVTQLNRLAAHPP 746
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 35.5 bits (78), Expect = 3.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 198 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 35.1 bits (77), Expect = 4.7
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 198 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 34.7 bits (76), Expect = 6.3
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 171 MASKAELACVYSALILVDDD 230
MAS +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,631,498
Number of Sequences: 1657284
Number of extensions: 15117653
Number of successful extensions: 28322
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 27166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28284
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 157278995250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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