BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_D02_e108_08.seq (1486 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 130 4e-30 AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 130 4e-30 AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 130 4e-30 Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 124 3e-28 >S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal protein rpA2 protein. Length = 112 Score = 130 bits (315), Expect = 4e-30 Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = +3 Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350 M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 351 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503 TNIGSGV DDDMGFGLFD Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112 >AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p protein. Length = 112 Score = 130 bits (315), Expect = 4e-30 Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = +3 Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350 M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 351 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503 TNIGSGV DDDMGFGLFD Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112 >AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA protein. Length = 112 Score = 130 bits (315), Expect = 4e-30 Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = +3 Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350 M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60 Query: 351 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503 TNIGSGV DDDMGFGLFD Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112 >Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Drosophila melanogastermRNA for A-type ribosomal protein rp21C. ). Length = 112 Score = 124 bits (299), Expect = 3e-28 Identities = 67/112 (59%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = +3 Query: 171 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 350 M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60 Query: 351 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 503 TNIGSGV DDDMGFGLFD Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 42,201,487 Number of Sequences: 53049 Number of extensions: 707973 Number of successful extensions: 1449 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1368 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1439 length of database: 24,988,368 effective HSP length: 88 effective length of database: 20,320,056 effective search space used: 8249942736 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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