Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_D01_e100_07.seq
(1458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 348 2e-94
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 340 5e-92
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 313 9e-84
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 242 2e-62
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 237 5e-61
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 224 5e-57
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 202 1e-50
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 188 2e-46
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 167 5e-40
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 160 7e-38
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 156 1e-36
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 155 3e-36
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 152 2e-35
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 151 4e-35
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 148 4e-34
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 146 2e-33
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 131 4e-29
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 127 8e-28
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 115 4e-24
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 111 3e-23
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 108 4e-22
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 4e-22
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 107 5e-22
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 102 3e-20
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 98 4e-19
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 96 2e-18
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 95 3e-18
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 89 3e-16
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 89 4e-16
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 86 2e-15
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 86 3e-15
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 85 4e-15
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 84 1e-14
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 80 2e-13
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 80 2e-13
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 79 3e-13
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 79 4e-13
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 77 9e-13
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 76 2e-12
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 70 1e-10
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 69 4e-10
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 66 3e-09
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 66 3e-09
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 65 4e-09
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 63 2e-08
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 3e-08
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 62 5e-08
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 60 1e-07
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 1e-07
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 1e-07
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 56 2e-06
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 55 5e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 9e-06
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 46 0.003
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.006
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 38 0.87
UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase - B... 35 4.6
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 35 4.6
UniRef50_UPI000150A24A Cluster: hypothetical protein TTHERM_0050... 34 8.1
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 348 bits (856), Expect = 2e-94
Identities = 168/236 (71%), Positives = 194/236 (82%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 334 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 513
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 514 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 693
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 694 SPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVA 861
SPFS+GLV++QV D+G+I+ P +LD E L +FL IG PTVA
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFL-EGVRNVASVCLQIGYPTVA 235
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 340 bits (836), Expect = 5e-92
Identities = 164/239 (68%), Positives = 196/239 (82%), Gaps = 3/239 (1%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 334 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 513
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 514 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL---LNM 684
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATL LNM
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 685 LNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVA 861
LNISPFSYGL+++QV D+G++++P +LD + L ++FL IG PT+A
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFL-KGVRNIASVCLQIGYPTLA 238
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 313 bits (768), Expect = 9e-84
Identities = 147/236 (62%), Positives = 187/236 (79%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 334 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 513
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 514 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 693
V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL ML I
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKI 180
Query: 694 SPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVA 861
PF+YGL + QV DSG++FAP+ILD +DL ++F++ IG PTVA
Sbjct: 181 FPFTYGLKIVQVYDSGSVFAPSILDITEDDLIKQFMS-GLANVAAVSLQIGYPTVA 235
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 242 bits (592), Expect = 2e-62
Identities = 118/217 (54%), Positives = 157/217 (72%), Gaps = 2/217 (0%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 334 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 507
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 508 LSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 687
+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180
Query: 688 NISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
I PFSYGLVV+ V D+G++F+P +LD + L EKF
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKF 217
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 237 bits (580), Expect = 5e-61
Identities = 117/214 (54%), Positives = 155/214 (72%), Gaps = 2/214 (0%)
Frame = +1
Query: 169 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 348
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 349 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 522
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 523 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 702
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL L I PF
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPF 186
Query: 703 SYGLVVKQVXDSGTIFAPAILDXKPEDLREKFLA 804
SYGLVV+ V D+G++F P +L+ +DL EKF A
Sbjct: 187 SYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAA 220
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 224 bits (547), Expect = 5e-57
Identities = 108/215 (50%), Positives = 147/215 (68%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 334 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 513
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 514 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 693
V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL L I
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKI 187
Query: 694 SPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
+PF YG V+ V D+G ++ LD D+ +KF
Sbjct: 188 NPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKF 222
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 202 bits (494), Expect = 1e-50
Identities = 105/216 (48%), Positives = 140/216 (64%), Gaps = 1/216 (0%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 334 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 510
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 511 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 690
V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV AS ATLL N
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFN 180
Query: 691 ISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
++P SYG+ V+ V D G I+ +LD ED+ EKF
Sbjct: 181 MNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKF 215
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 188 bits (459), Expect = 2e-46
Identities = 101/227 (44%), Positives = 139/227 (61%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 361 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 540
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 541 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 720
+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEP 188
Query: 721 KQVXDSGTIFAPAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVA 861
K + D+G ++P+I + EDL KF IG PTVA
Sbjct: 189 KIIYDAGACYSPSISE---EDLINKF-KQGIFNIAAISLEIGYPTVA 231
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 167 bits (407), Expect = 5e-40
Identities = 89/233 (38%), Positives = 142/233 (60%), Gaps = 18/233 (7%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 330
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 331 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 459
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 460 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 639
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIIT 180
Query: 640 PGDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
G+KVG++EA LL LNI+PFSY L V V D+G ++ P +LD E + E +
Sbjct: 181 EGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESIIESY 233
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 160 bits (389), Expect = 7e-38
Identities = 90/224 (40%), Positives = 134/224 (59%), Gaps = 17/224 (7%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 361 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 489
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 490 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEA 669
G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SEA
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEA 182
Query: 670 TLLNMLNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKFL 801
LL L + PFS+GL VK V D+G++++ +L + L KF+
Sbjct: 183 VLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKLTNDILLGKFM 226
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 156 bits (379), Expect = 1e-36
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 18/233 (7%)
Frame = +1
Query: 154 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 330
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 331 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 459
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 460 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILK 639
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLK 180
Query: 640 PGDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
G KVG S+A LL L PF YG+ V D+G+I + D+ KF
Sbjct: 181 TGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIVAKF 233
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 155 bits (376), Expect = 3e-36
Identities = 94/247 (38%), Positives = 135/247 (54%), Gaps = 9/247 (3%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 361 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 513
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 514 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 693
V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S ATLL L+I
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDI 187
Query: 694 SPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVAVCXX 873
SPF Y + V+ V D G +F L +D+ EK+L G PT A
Sbjct: 188 SPFYYQVEVQSVWDRGMLFLREDLSI-TDDVVEKYLLEGISNVAALSLGAGIPTAATLPH 246
Query: 874 FHRERFQ 894
+ F+
Sbjct: 247 MIMDAFK 253
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 152 bits (369), Expect = 2e-35
Identities = 87/212 (41%), Positives = 123/212 (58%)
Frame = +1
Query: 169 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 348
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 349 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 528
+ L+ + L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 529 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 708
T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S ATLL L I PF Y
Sbjct: 127 MLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFY 186
Query: 709 GLVVKQVXDSGTIFAPAILDXKPEDLREKFLA 804
+ + D G I+ A+L+ + K+ A
Sbjct: 187 AMSALNLYDDGEIYDAAVLEIDDSVMEAKWNA 218
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 151 bits (366), Expect = 4e-35
Identities = 82/216 (37%), Positives = 129/216 (59%)
Frame = +1
Query: 139 FTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 318
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 319 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 498
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 678
+A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S+A LL
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLL 197
Query: 679 NMLNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDL 786
MLNI PF Y + + Q+ + G I+ +++D ED+
Sbjct: 198 GMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDI 233
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 148 bits (358), Expect = 4e-34
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 16/227 (7%)
Frame = +1
Query: 166 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 345
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 346 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 477
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 478 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 657
APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIG 186
Query: 658 ASEATLLNMLNISPFSYGLVVKQVXDSGTIFAPAILDXKPEDLREKF 798
SE +LL +NI PFSYG+ D+G I +L P + + F
Sbjct: 187 NSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISPSVILDAF 233
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 146 bits (353), Expect = 2e-33
Identities = 78/207 (37%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 357
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 538 GLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 717
+ P AL+I KI KGTIEI + ++ G KVGASEA +LN+L I PF Y L
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLK 190
Query: 718 VKQVXDSGTIFAPAILDXKPEDLREKF 798
++ + D G ++ P+IL E L EKF
Sbjct: 191 IEALYDHGNMYDPSILAITEEVLGEKF 217
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 131 bits (317), Expect = 4e-29
Identities = 66/196 (33%), Positives = 113/196 (57%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 361 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 540
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 541 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVV 720
+ P+ FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL LNI PF + +
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKI 188
Query: 721 KQVXDSGTIFAPAILD 768
++G + P++L+
Sbjct: 189 ISFYENGKSYDPSVLN 204
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 127 bits (306), Expect = 8e-28
Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Frame = +1
Query: 145 QSKMGREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLM 318
Q G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M
Sbjct: 8 QPPSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRM 67
Query: 319 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 498
+NT+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG
Sbjct: 68 SRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGD 127
Query: 499 IAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL 675
IAP +V+P T P S Q +P +I G + I D ++K G+++ A +
Sbjct: 128 IAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEI 187
Query: 676 LNMLNISPFSYGLVVKQVXDSGTIF 750
L L I P G+ + + GT+F
Sbjct: 188 LKKLEIEPMEVGVDIVAIVAEGTLF 212
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 115 bits (276), Expect = 4e-24
Identities = 67/179 (37%), Positives = 97/179 (54%)
Frame = -1
Query: 750 EDGTGVVHLFDNKTIRKGRDVQHVEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKS 571
ED T VV+L D +T+ + R+VQ V++ SFRS+ +T + D+++ DNFN T NL + +S
Sbjct: 128 EDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQS 187
Query: 570 LEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVR 391
LEERSL V N D W N + + + V I + GED+ N++LD R
Sbjct: 188 LEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDER 247
Query: 390 KQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ*NTDLLHLLRAYIVRTHYETFWVFVQ 214
+Q F W D HGV H+ N+ +Q +D +HLL +IV T+ E VF Q
Sbjct: 248 QQLFVVWEVRDETSDSSSDHGVLTHQDNSSASQVLSDFVHLLGRHIVNTNNEDRLVFFQ 306
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 111 bits (268), Expect = 3e-23
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Frame = +1
Query: 172 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 348
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 349 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 522
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 523 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 699
PA T L P QAL IP +I KG + I D +LK G+ + A +LN L I P
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQP 184
Query: 700 FSYGLVVKQVXDSGTIFAPAIL 765
GL V V + G ++ P +L
Sbjct: 185 LEVGLDVLAVYEDGIVYTPDVL 206
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 108 bits (259), Expect = 4e-22
Identities = 56/180 (31%), Positives = 97/180 (53%)
Frame = +1
Query: 199 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 378
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 379 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 558
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 559 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVXDS 738
FFQAL IPT+ISK +IEII D+ ++ + S+ LL L+I P YG+ +K++ S
Sbjct: 131 PFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSS 190
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 4e-22
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 337 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 474
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 58.8 bits (136), Expect(2) = 4e-22
Identities = 46/97 (47%), Positives = 51/97 (52%)
Frame = +1
Query: 571 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIF 750
ALSIP KISKGTIEIINDV ILK GDK ++QV G+IF
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDK----------------------IEQVY--GSIF 773
Query: 751 APAILDXKPEDLREKFLAXXXXXXXXXXXXIGNPTVA 861
+P ILD KPEDLR KF IG PT+A
Sbjct: 774 SPDILDIKPEDLRAKF-QVGVANLAGVSLEIGYPTLA 809
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 107 bits (258), Expect = 5e-22
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 1/210 (0%)
Frame = +1
Query: 163 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 342
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 343 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 522
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 523 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 699
P +TG+ P Q + +I +G+I++++D + + G+ V + +L+ L I P
Sbjct: 127 PEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEP 186
Query: 700 FSYGLVVKQVXDSGTIFAPAILDXKPEDLR 789
GL ++ V G +F P L+ ++ R
Sbjct: 187 KEVGLDLRGVFSEGVLFTPEELEIDVDEYR 216
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 102 bits (244), Expect = 3e-20
Identities = 62/139 (44%), Positives = 72/139 (51%)
Frame = -2
Query: 608 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 429
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 428 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 249
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 248 APTMKHFGYSSNSWMILTK 192
PT YSS + L K
Sbjct: 121 TPTTNKDLYSSKYSLNLAK 139
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 98.3 bits (234), Expect = 4e-19
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 358 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 531
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 532 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 708
NTG+ P S F L IPT+I G I + D + KPGD V A LL ++N+ P
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYE 197
Query: 709 GLVVKQV 729
L VK V
Sbjct: 198 SLKVKAV 204
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 96.3 bits (229), Expect = 2e-18
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Frame = +1
Query: 172 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 351
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 352 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 531
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 532 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 708
+T P Q + IP KI KG+I + +D I+ G+++ + A +L L I P
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEV 182
Query: 709 GLVVKQVXDSGTIFAPAILDXKPED 783
G+ + V + TI+ +L E+
Sbjct: 183 GIDLLAVCEGDTIYTADVLAIDEEE 207
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 95.5 bits (227), Expect = 3e-18
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 3/211 (1%)
Frame = +1
Query: 172 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 351
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 352 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 525
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 526 AHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 702
+ +TG+ P S +A+ IP I KG I I D + K GD + A +L+ L I P
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPV 190
Query: 703 SYGLVVKQVXDSGTIFAPAILDXKPEDLREK 795
+ GL V V + G I+ +L E+ K
Sbjct: 191 TVGLNVLGVYEEGVIYTSDVLRIDEEEFLGK 221
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 89.0 bits (211), Expect = 3e-16
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 2/189 (1%)
Frame = +1
Query: 238 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 417
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 418 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 591
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 592 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIFAPAILDX 771
I +GTI I+ D +K G+ +G A LL L+I P + ++ + G I++ L
Sbjct: 134 IDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKPVEAVIALESALEEGVIYSREDLAV 193
Query: 772 KPEDLREKF 798
E +R F
Sbjct: 194 DVEAIRAGF 202
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 88.6 bits (210), Expect = 4e-16
Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 361 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 540
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 541 L--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
+ GP T F +A IPTKI +GTI I D + G+ + A +L L+I P G+
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGI 188
Query: 715 VVKQVXDSGTIFAPAILDXKPEDLREKF 798
+ + G +A + E +R++F
Sbjct: 189 TLFTALEDGLKYAEEEMIIDVEKVRDEF 216
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 86.2 bits (204), Expect = 2e-15
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 538 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
P Q + IP I G ++I ++K G+ + A L L + P GL
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGL 187
Query: 715 VVKQVXDSGTIFAPAIL 765
+++ TIF P +L
Sbjct: 188 ILQAAYYRETIFTPDLL 204
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 85.8 bits (203), Expect = 3e-15
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 357
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 538 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
G+ P S F L IPT++ +G+I I D + KPGD + A LL+ L + P L
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKL 193
Query: 715 VVKQVXDSGTIFAP 756
+K + G + +P
Sbjct: 194 QIKTIYLDGKVVSP 207
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 85.0 bits (201), Expect = 4e-15
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Frame = +1
Query: 172 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 351
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 352 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 528
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 529 HNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPF 702
+TG+ GP S F L + TK+ G + ++ D + KPGD + A +L L I P
Sbjct: 130 GDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPV 188
Query: 703 SYGLVVKQVXDSGTIFAPAILDXKPEDLR 789
L +K G + L E R
Sbjct: 189 YVKLKIKVAYHEGLVIPAESLKLDLEGYR 217
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 83.8 bits (198), Expect = 1e-14
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Frame = +1
Query: 208 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 387
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 388 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 564
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 565 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 699
F L IPT++ +G I I D + K G ++ A +L ++ I P
Sbjct: 147 FGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 79.8 bits (188), Expect = 2e-13
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 538 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
P Q+ IP I G + + + K G+ V AT+L+ L I P GL
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGL 190
Query: 715 VVKQVXDSGTIFAPAIL 765
++ D GTI+ P +L
Sbjct: 191 DLRAAYDDGTIYEPELL 207
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 79.8 bits (188), Expect = 2e-13
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Frame = +1
Query: 199 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 378
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 379 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 555
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPL 134
Query: 556 TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVXD 735
+ Q +P I KG + + ++K G+ V A L L+I P GL VK + D
Sbjct: 135 MAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLD 194
Query: 736 SGTIFAPAILDXKPEDLREKF 798
SG I P L E + E F
Sbjct: 195 SGVILTPETLAIDTEKVLEDF 215
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 79.0 bits (186), Expect = 3e-13
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 538 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
GL P S F L IPT+I +I I D + KPGD + A+LL L+I+ +
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKI 191
Query: 715 VVKQVXDSGTI 747
+K D G I
Sbjct: 192 NIKAAYDHGII 202
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 78.6 bits (185), Expect = 4e-13
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 538 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
L P Q L IP+ I G + + ++ G+ V A +L L I P + GL
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADMLAKLEIYPITEGL 185
Query: 715 VVKQVXDSG 741
+ V DSG
Sbjct: 186 DLCAVYDSG 194
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 77.4 bits (182), Expect = 9e-13
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 538 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
P FQ + IP I G + I + ++K G+K+ A A L L I P GL
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAEALTRLEIMPIDVGL 194
Query: 715 VVKQVXDSGTIFAPAILDXKPEDLREKF 798
+ + ++ P L + LR+ F
Sbjct: 195 NLMAAVEGHMLYKPEDLGMDEDLLRDMF 222
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 76.2 bits (179), Expect = 2e-12
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Frame = +1
Query: 160 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 336
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 337 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 516
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 517 VIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 693
V+PA +TGL P S F L I T + GTI I D + KPGD + A+LL L I
Sbjct: 131 VVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLGI 190
Query: 694 SPFSYGLVVK 723
+P + +K
Sbjct: 191 TPMELKMKIK 200
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 70.1 bits (164), Expect = 1e-10
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 361 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 534
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--Q 150
Query: 535 TGLGPEKTSF-----FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 678
L +K SF + L +PT + I ++ D + K GD + +++A LL
Sbjct: 151 GPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 68.5 bits (160), Expect = 4e-10
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Frame = +1
Query: 142 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 321
TQ+K REDK +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-REDK----DKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 322 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 495
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 496 AIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEAT 672
A S+V+ P L +P K+ +G I ++ D + +PGD + A A
Sbjct: 130 QTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPGDTLSAEAAQ 189
Query: 673 LLNMLNISPFSYGLVVKQVXDSG 741
LL + + + + + SG
Sbjct: 190 LLKLFGVQSAKFKMDLTAHWTSG 212
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 65.7 bits (153), Expect = 3e-09
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Frame = +1
Query: 238 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 417
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 418 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 591
+ T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTK 142
Query: 592 ISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 699
++ G IEI+ D ++K G+ V A +L L I P
Sbjct: 143 VTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 65.7 bits (153), Expect = 3e-09
Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 358 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 537
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 538 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGL 714
P Q+ IP I G + I V + K GD + A +L ++ I P GL
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVITPKVAEVLKLMEIYPKLVGL 190
Query: 715 VVKQVXDSGTIF 750
++ +F
Sbjct: 191 ELRAAYSDRLVF 202
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 65.3 bits (152), Expect = 4e-09
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 3/185 (1%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 351
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 352 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 531
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 532 N-TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSY 708
++L +PTK+ KG + + +D + + G + +A +L ++ +
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVGKPMAKF 201
Query: 709 GLVVK 723
L +K
Sbjct: 202 RLTMK 206
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 62.9 bits (146), Expect = 2e-08
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 354
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 355 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 534
E L ++ H++G VG +FT +V + K AR G A +V +
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGP 148
Query: 535 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 711
P + L +PT + KG + +++D + K GD + +A +L + +
Sbjct: 149 LEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDILTPEQARVLKLFGYEMAEFK 208
Query: 712 LVVKQVXDSGT 744
+ +K + +S T
Sbjct: 209 VTIKFLWNSET 219
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 62.5 bits (145), Expect = 3e-08
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 2/206 (0%)
Frame = +1
Query: 178 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 357
WK+ ++ +L ++ + +Q++R L +++ K ++ +A+K
Sbjct: 17 WKTLMLRELEELFSKHRVVLFADLTGTPTFVVQRVRKKLWKKYPMMVAKKRIILRAMKAA 76
Query: 358 -LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 534
LE + L L ++G + VF G+ + ++ + KV P +PG A + IP
Sbjct: 77 GLELDDNLLDDL--VRGQMLLVFADGNPFKIVKEVEKEKVAMPVKPGDKAETEIRIPEGM 134
Query: 535 TGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 711
T L P S F L I ++ G I I + + KPGD + A LL L I P G
Sbjct: 135 TNLTPGPILSVFGKLRIQYQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKG 194
Query: 712 LVVKQVXDSGTIFAPAILDXKPEDLR 789
+ VK D G + +L E R
Sbjct: 195 VRVKFAIDGGVLITEDLLRPDIEAFR 220
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 61.7 bits (143), Expect = 5e-08
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Frame = +1
Query: 148 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 327
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 328 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 501
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 502 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 678
A +VV+P + + L +PTK+ KG I + + K G+ + +A +L
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKIL 191
Query: 679 NMLNISPFSYGLVVK 723
+ + L+ K
Sbjct: 192 KHFEVKMSQFRLIFK 206
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 60.5 bits (140), Expect = 1e-07
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 5/184 (2%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 357
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 358 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 534
++ P L L ++KG +FT+ ++R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 535 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI--SPFS 705
P + L +P K+ +G + + D + D + + +L + I S F
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPEQCRILKLFQIEMSEFR 195
Query: 706 YGLV 717
GL+
Sbjct: 196 VGLL 199
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 1e-07
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 304 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 483
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 484 ARPGAIAPLSVVIPAHNTGL 543
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 1e-07
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 259 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 432
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 433 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 543
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 1e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 367 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 543
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 56.0 bits (129), Expect = 2e-06
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Frame = +1
Query: 142 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 321
TQ+K ++D+ WKS ++ L E ++ +N+ + +++R + + +G
Sbjct: 13 TQTK--KKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVG 69
Query: 322 KNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 495
N ++R A+ +D E + L +KG+ G +FT DV V+ AR G
Sbjct: 70 SNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTG 129
Query: 496 AIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKGTIEIINDVHILKPGDKVG 657
A+A +V + P H +G E T + +PTK+++G IE+ + + K G +
Sbjct: 130 ALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHTLCKEGQHIS 189
Query: 658 ASEATLLNM 684
A LL +
Sbjct: 190 PQGAILLRL 198
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 54.8 bits (126), Expect = 5e-06
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Frame = +1
Query: 151 KMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNT 330
K G E KA F + Q LD + +I N+ + +++IR +G S + MGK
Sbjct: 17 KKGHEGKAA----LFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTK 71
Query: 331 MMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAI 501
+M KA+ E A + KL + G VG +FT +V E+ VQ AR GA+
Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAV 130
Query: 502 APLSVVIPA----HNTGLGPEKTSFF---------QALSIPTKISKGTIEIINDVHILKP 642
AP + VIPA G P + + L +PT + G + ++ D +
Sbjct: 131 APFTHVIPAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTE 190
Query: 643 GDKVGASEATLLNMLNI--SPFSYGLV 717
G ++ + + LL + I + F GL+
Sbjct: 191 GQQLDSRQTRLLKLFGITAAEFKVGLL 217
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 9e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +1
Query: 181 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 360
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 361 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 528
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 45.6 bits (103), Expect = 0.003
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Frame = +1
Query: 160 REDKATW--KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 333
R DK T K+N K+ EYP +I+G ++ + ++++R +G S + GK +
Sbjct: 14 RTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKV 72
Query: 334 MRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 507
+ A+ + E + + + G+VG +FT +V D + + AR G+ A
Sbjct: 73 LALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKAT 132
Query: 508 LSVVIPAH--NTGLGPEKT------SFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 663
++ +P P T + L +PT++ +G ++ + + K G + ++
Sbjct: 133 ETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNYVVCKEGQTLTSN 192
Query: 664 EATLLNMLNISPFSYGLV 717
+A +L + + ++ L+
Sbjct: 193 QAQILKHILVHMAAFRLI 210
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.006
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 566 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 393
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 392 GSSFSRAGF 366
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 37.5 bits (83), Expect = 0.87
Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Frame = -2
Query: 755 GAKMVPESXTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSLIISIVPFEI-LVGM 579
G M+ + LT YEKGE +N SEA LSP +RI + + +I +
Sbjct: 178 GTLMLLNNYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNA 237
Query: 578 ERAWKKEVFSGPRPVL*AGMTTDNGAMAPGR--AGAWTLFSNSLSRTSTRSPRVKTKPT 408
A K V S P + + G + PGR A TL + VK PT
Sbjct: 238 MAAQKAAVASDP-SIQVLALPFRKGEIVPGRHQRVALTLTEKETQQLLAACKNVKATPT 295
>UniRef50_Q9XJT6 Cluster: Terminase; n=2; root|Rep: Terminase -
Bacteriophage D3
Length = 563
Score = 35.1 bits (77), Expect = 4.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -1
Query: 708 IRKGRDVQHVEKSSFRSSHLITRLQDMDI-IDNFNSTL*NLSGDGKSLEERSLLRTKASV 532
+ K D+Q +++++LITRL + I + +FN T+ N+S K +E R + RT
Sbjct: 434 LAKQIDLQDAAFDDWQANYLITRLSNTSIPVVDFNQTVKNMSDPMKEVEARVIARTLWH- 492
Query: 531 MSGNDDRQWSNGS 493
GN W G+
Sbjct: 493 -DGNPVMTWMMGN 504
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 35.1 bits (77), Expect = 4.6
Identities = 23/107 (21%), Positives = 48/107 (44%)
Frame = -1
Query: 714 KTIRKGRDVQHVEKSSFRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKAS 535
+T +G+ V H++ S L + DI++NFN N D ++L +R L
Sbjct: 240 QTDSQGKLVVHLQISKDTLPKLRVN-KTQDIVENFNKIYHNFENDKETLLKRLKLEENDK 298
Query: 534 VMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDV 394
++ + R++S+ + G+D +++ + K ++L V
Sbjct: 299 LLEYDKKRKYSDKANEEAGIDSIIEDSEPDVKKSRNSISSLPVNLGV 345
>UniRef50_UPI000150A24A Cluster: hypothetical protein
TTHERM_00500880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00500880 - Tetrahymena
thermophila SB210
Length = 415
Score = 34.3 bits (75), Expect = 8.1
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -1
Query: 288 NTDLLHLLRAYIVRTHYETFWVFVQQ---LDDFNEVIGLPGSLVLPTHLGLSEVGTSEKF 118
N DLL LL AY + H+E ++ + Q LDD N+V L T L ++EV S+ F
Sbjct: 327 NLDLLILLFAYPTKEHFERKFISLSQKNRLDDLNQV-----KQHLCTSLKVTEVDYSKNF 381
Query: 117 KDKTNTH 97
+ N H
Sbjct: 382 NNYKNYH 388
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,142,297,457
Number of Sequences: 1657284
Number of extensions: 22153678
Number of successful extensions: 56293
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 53726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56239
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 153649479975
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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