Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_D01_e100_07.seq
         (1458 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   1.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   6.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   6.6  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 643 GDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIFAP 756
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 643 GDKVGASEATLLNMLNISPFSYGLVVKQVXDSGTIFAP 756
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +3

Query: 336 EESHQGPS*NKSSSRKTASSHQGKC---WLCLHPWR 434
           +   QGP  + + +  + S H   C   W+C H WR
Sbjct: 350 QSKDQGPPNDGNGNILSPSIHDNICSNGWICEHRWR 385


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 309 CAHGQKHHDEESHQGPS*NKSSSRKTASS 395
           C  G+  HD++    P  + SSS ++A S
Sbjct: 430 CLDGKLPHDDQPPLSPQSDSSSSSRSAES 458


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 567  EERSLLRTKASVMSGNDDRQW 505
            E R  LRT A++++ N+ R W
Sbjct: 1177 ELRPYLRTAAAILTWNEKRFW 1197


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 104 FVLSLNFSEVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQNVS 238
           FV+ + F+ VP+SLN   +      G P+ +      W   +N S
Sbjct: 75  FVIIMKFNGVPSSLNV--ITNKTGNGGPLLAPYPDWTWAKNENCS 117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,492
Number of Sequences: 438
Number of extensions: 6827
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 50721000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)