Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_C10_e171_06.seq
         (1493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    31   0.022
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.47 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   5.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 31.1 bits (67), Expect = 0.022
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 50  KYLHSARILHRDIKPGNLLVNSNCVLKICDXWFGASR 160
           ++L   R++HRD+   N+LV  N  +K+ D  FG SR
Sbjct: 606 EHLAKTRVVHRDLAARNVLVCENHTVKVSD--FGLSR 640


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +3

Query: 183 MTQEVVTQYYRAPEILMGANHYTAAVDVWSVGCIFGELLGRRILFQAQSPVQQLELI 353
           M  EV+  Y+       G     + V +++VG ++     RRI +Q +SP+ +L  I
Sbjct: 1   MDLEVLEIYFTVANKFSGKLWPISIVLIYTVGVVYS--FKRRIFYQDESPISRLVYI 55


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 301 PSSSPKMQPTDHTSTA 254
           PSS+P   PT  TST+
Sbjct: 77  PSSTPSSLPTQRTSTS 92


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 458 AVHALSAGDSRGRSSTRTD 514
           A+H  S  D RGRS T T+
Sbjct: 318 AIHQGSVTDERGRSITLTE 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,587
Number of Sequences: 336
Number of extensions: 3013
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44759725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)