Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_C08_e155_06.seq
(1504 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021435-1|AAX33583.1| 650|Drosophila melanogaster GH10846p pro... 55 3e-07
AE014297-2824|AAF55784.1| 650|Drosophila melanogaster CG5434-PA... 55 3e-07
EF057981-1|ABL84916.1| 845|Drosophila melanogaster Nup107 protein. 31 3.1
EF057988-1|ABL84923.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057987-1|ABL84922.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057986-1|ABL84921.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057985-1|ABL84920.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057984-1|ABL84919.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057983-1|ABL84918.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057982-1|ABL84917.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057980-1|ABL84915.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057979-1|ABL84914.1| 846|Drosophila melanogaster Nup107 protein. 31 5.4
EF057978-1|ABL84913.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
EF057977-1|ABL84912.1| 845|Drosophila melanogaster Nup107 protein. 31 5.4
AF160938-1|AAD46878.1| 845|Drosophila melanogaster BcDNA.LD1876... 31 5.4
AE014134-1943|AAF53002.1| 845|Drosophila melanogaster CG6743-PA... 31 5.4
AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p pro... 30 9.5
AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB... 30 9.5
AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA... 30 9.5
>BT021435-1|AAX33583.1| 650|Drosophila melanogaster GH10846p
protein.
Length = 650
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Frame = +2
Query: 104 ERRAALVEASSLAKEGKKMQSVSLLLKQGGT-------LVLAAAHVLLSQGDRKGAVK-L 259
E A L+ + LAK+ K +++ L K A + L QG+RK A++ L
Sbjct: 331 EFEALLIRCTQLAKDRKHKEAIEQLQKFAAAHKSHEFVSKFAIIQLQLLQGNRKDAIETL 390
Query: 260 LEESEFRYRPGVVGALCTLLCADNEYVKASQLFTDVYQHYKDDQLFA-SLCXXXXXXXXX 436
L E +Y+PGVV AL +L + AS L YK +++ + L
Sbjct: 391 LSLGEAKYKPGVVSALVSLYLGTDNKTAASALLKSAVDWYKKNEVSSGDLSDMWRQAAEF 450
Query: 437 XXXXXXXXXXXXXXXXXXXXXPXDKRSLARLVKALAXASPDRARRLAETLPPLE 598
P D + LA+LV A A P RA L+ LP LE
Sbjct: 451 HLRGGASETAASSLEELLKLNPNDTKVLAQLVIAYAQFQPKRALELSRKLPKLE 504
>AE014297-2824|AAF55784.1| 650|Drosophila melanogaster CG5434-PA
protein.
Length = 650
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Frame = +2
Query: 104 ERRAALVEASSLAKEGKKMQSVSLLLKQGGT-------LVLAAAHVLLSQGDRKGAVK-L 259
E A L+ + LAK+ K +++ L K A + L QG+RK A++ L
Sbjct: 331 EFEALLIRCTQLAKDRKHKEAIEQLQKFAAAHKSHEFVSKFAIIQLQLLQGNRKDAIETL 390
Query: 260 LEESEFRYRPGVVGALCTLLCADNEYVKASQLFTDVYQHYKDDQLFA-SLCXXXXXXXXX 436
L E +Y+PGVV AL +L + AS L YK +++ + L
Sbjct: 391 LSLGEAKYKPGVVSALVSLYLGTDNKTAASALLKSAVDWYKKNEVSSGDLSDMWRQAAEF 450
Query: 437 XXXXXXXXXXXXXXXXXXXXXPXDKRSLARLVKALAXASPDRARRLAETLPPLE 598
P D + LA+LV A A P RA L+ LP LE
Sbjct: 451 HLRGGASETAASSLEELLKLNPNDTKVLAQLVIAYAQFQPKRALELSRKLPKLE 504
>EF057981-1|ABL84916.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 68 HEGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
++G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 272 YDGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057988-1|ABL84923.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057987-1|ABL84922.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057986-1|ABL84921.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057985-1|ABL84920.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057984-1|ABL84919.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057983-1|ABL84918.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057982-1|ABL84917.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057980-1|ABL84915.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057979-1|ABL84914.1| 846|Drosophila melanogaster Nup107 protein.
Length = 846
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 274 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 309
>EF057978-1|ABL84913.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>EF057977-1|ABL84912.1| 845|Drosophila melanogaster Nup107 protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>AF160938-1|AAD46878.1| 845|Drosophila melanogaster BcDNA.LD18761
protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>AE014134-1943|AAF53002.1| 845|Drosophila melanogaster CG6743-PA
protein.
Length = 845
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 71 EGVKLIKEFGEERRAALVEASSLAKEGKKMQSVSLL 178
+G+KL K FG+ RAA++E L ++ Q+VS+L
Sbjct: 273 DGLKLCKHFGQTWRAAILEGWRLHEDPNFEQNVSVL 308
>AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p
protein.
Length = 620
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 150 PSFAREDASTSAARRSSPNSLISFTPSCRIXCXPGG 43
P + + + +AAR +PN+ I+F+PS + PGG
Sbjct: 480 PKASPKPQTPTAARLRTPNAKINFSPSISLRGRPGG 515
>AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB,
isoform B protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 150 PSFAREDASTSAARRSSPNSLISFTPSCRIXCXPGG 43
P + + + +AAR +PN+ I+F+PS + PGG
Sbjct: 459 PKASPKPQTPTAARLRTPNAKINFSPSISLRGRPGG 494
>AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA,
isoform A protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 150 PSFAREDASTSAARRSSPNSLISFTPSCRIXCXPGG 43
P + + + +AAR +PN+ I+F+PS + PGG
Sbjct: 459 PKASPKPQTPTAARLRTPNAKINFSPSISLRGRPGG 494
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,313,422
Number of Sequences: 53049
Number of extensions: 522375
Number of successful extensions: 1428
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8371863072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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