Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_C04_e123_06.seq
         (1456 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   4.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   9.5  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 4.1
 Identities = 20/72 (27%), Positives = 27/72 (37%)
 Frame = +3

Query: 318 KPEPIEKPPESQTRESYTSGDNVFQSGSENNISYHSEYGXSRYTGFGNTPKQSQSTPMTP 497
           +P+PIE+P        Y+S D+   S         SE   +        P  +Q TP   
Sbjct: 27  QPQPIERPATPMMELCYSSDDDELNSTIIAMPEPASECEAAEAAMDLEPPAAAQPTPTAS 86

Query: 498 IHSGNEVVDNTI 533
              GN VV   I
Sbjct: 87  PVPGNMVVAGPI 98


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 9.5
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 423  SEYGXSRYTGFGNTPKQSQSTPMTPIHSGNEVVD---NTIATLATGWSMFT 566
            SE   S+Y+ F + PK  Q  P    +  N+V D     IA+L  G ++ T
Sbjct: 1613 SEPNTSQYSTFIHEPKHHQEDPPVLKYIKNQVRDVFHAPIASLVKGAAVLT 1663


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,052,841
Number of Sequences: 2352
Number of extensions: 19828
Number of successful extensions: 46
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 169466715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)