Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_C04_e123_06.seq
(1456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 101 1e-21
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 45 1e-04
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 45 1e-04
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 43 6e-04
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 43 6e-04
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 43 6e-04
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 43 6e-04
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 43 6e-04
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 38 0.018
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 38 0.018
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 38 0.018
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 38 0.018
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 34 0.22
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.67
AF016442-1|AAB65918.1| 340|Caenorhabditis elegans Hypothetical ... 33 0.67
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 31 1.5
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 30 3.6
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 30 4.7
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 6.2
U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41270-3|ABC71846.1| 254|Caenorhabditis elegans Hypothetical pr... 29 8.2
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 101 bits (243), Expect = 1e-21
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 18/193 (9%)
Frame = +3
Query: 144 LEKMLVGGNAKAQEFFVSQPDYKAGMTIMQKYNTKAAAMYRQKIAALAEGHSWSPS---- 311
L KM GGN K EF SQPDYK TI +KYN++AAA++R K+A AEG WS S
Sbjct: 72 LAKMKAGGNRKFAEFLQSQPDYKEKWTIQEKYNSRAAALFRDKVACEAEGREWSQSTSPA 131
Query: 312 -DYKP----------EPIEKPPESQTRESYTSGDNVFQSGSENNISYHSEYGXSRYTGFG 458
+Y P +P K + + SY G++ + S S + +Y ++ S+Y GFG
Sbjct: 132 ANYVPPTLGGMSSQSKPTNKSSGNSSLGSYYGGNSSY-SQSTGDGAYSTQDSNSKYQGFG 190
Query: 459 NT---PKQSQSTPMTPIHSGNEVVDNTIATLATGWSMFTSSVSKAARTATENAVRYGGIA 629
NT P QS +SG++++ ++ L+ GWSM + S+AA A + ++ A
Sbjct: 191 NTGYVPNQS--------NSGDDLLAGAMSGLSMGWSMLSKGASQAAAMAKDVGIQ----A 238
Query: 630 SQKVSEMASTVTE 668
QK S+++ V++
Sbjct: 239 QQKASQLSENVSQ 251
Score = 66.1 bits (154), Expect = 6e-11
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKWKDIXI 145
ICL+CSG+HRSLGVHLSF RSVTMDKWKDI +
Sbjct: 41 ICLECSGIHRSLGVHLSFVRSVTMDKWKDIEL 72
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 45.2 bits (102), Expect = 1e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC+ C+G+HR+LGVH+S RSV +D W
Sbjct: 51 ICIRCAGIHRNLGVHISKVRSVNLDSW 77
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 45.2 bits (102), Expect = 1e-04
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMD-KWKDIXIR 148
+C+DCS VHR+LGVHL+F RS +D W + +R
Sbjct: 47 LCIDCSAVHRNLGVHLTFVRSTNLDTNWTWLQLR 80
Score = 35.1 bits (77), Expect = 0.13
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 144 LEKMLVGGNAKAQEFFVSQPDYKAGMTIMQKYNTKAAAMYRQKIAALAE 290
L M +GGN A +FF + QKY ++AA MYR K++ L +
Sbjct: 79 LRAMQLGGNGNANQFFKAHGCNTT--EAQQKYKSRAAQMYRDKLSTLCQ 125
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 42.7 bits (96), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC++CSG+HR+LG H+S R + +D+W
Sbjct: 652 ICIECSGIHRNLGSHISKVRGLELDQW 678
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 42.7 bits (96), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC++CSG+HR+LG H+S R + +D+W
Sbjct: 700 ICIECSGIHRNLGSHISKVRGLELDQW 726
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 42.7 bits (96), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC++CSG+HR+LG H+S R + +D+W
Sbjct: 856 ICIECSGIHRNLGSHISKVRGLELDQW 882
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 42.7 bits (96), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC++CSG+HR+LG H+S R + +D+W
Sbjct: 856 ICIECSGIHRNLGSHISKVRGLELDQW 882
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 42.7 bits (96), Expect = 6e-04
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMDKW 130
IC++CSG+HR+LG H+S R + +D+W
Sbjct: 701 ICIECSGIHRNLGSHISKVRGLELDQW 727
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMD 124
+C++CSG HRSLGV S RS+ MD
Sbjct: 397 LCIECSGAHRSLGVQTSKVRSLCMD 421
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMD 124
+C++CSG HRSLGV S RS+ MD
Sbjct: 481 LCIECSGAHRSLGVQTSKVRSLCMD 505
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMD 124
+C++CSG HRSLGV S RS+ MD
Sbjct: 397 LCIECSGAHRSLGVQTSKVRSLCMD 421
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 37.9 bits (84), Expect = 0.018
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 50 ICLDCSGVHRSLGVHLSFXRSVTMD 124
+C++CSG HRSLGV S RS+ MD
Sbjct: 481 LCIECSGAHRSLGVQTSKVRSLCMD 505
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.22
Identities = 29/120 (24%), Positives = 51/120 (42%)
Frame = +3
Query: 345 ESQTRESYTSGDNVFQSGSENNISYHSEYGXSRYTGFGNTPKQSQSTPMTPIHSGNEVVD 524
E + ++S G++ Q+ SE +S S+ + TP+ S +TP T S ++
Sbjct: 195 EFEEKKSCKRGNDHEQASSETRVSIESDAPPNPAPPPSTTPETSSTTPSTVTSSTSDPNA 254
Query: 525 NTIATLATGWSMFTSSVSKAARTATENAVRYGGIASQKVSEMASTVTEKVXNSRWVXLPG 704
T + A+G T S A +A + G + K ++ ST + S + PG
Sbjct: 255 PTASDAASGTGTGTESSDTPASSAPPTSAA-SGPPAPKSNDKDSTGDKIYVKSEYCGAPG 313
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 32.7 bits (71), Expect = 0.67
Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Frame = +3
Query: 303 SPSDYKPEPIEKPPESQTRESYTSGDNVFQSGSENNISYHSEYGX------SRYTGFGNT 464
SPS P P P S T S TSG + S + S S F +T
Sbjct: 1343 SPSSISPVPTSSPIPSTTFASSTSGSTISDVSSVSTTSLAPLSSSLPSTVPSSTQSFSST 1402
Query: 465 PKQSQSTPMTPIHSGNEVVDNTIATLATGWSMFTSSVSKAARTATENAVRYGGIASQKVS 644
+ S +P+ S ++ +S++S + + T + G + S
Sbjct: 1403 SEGSSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNS 1462
Query: 645 EMASTVT 665
+ STVT
Sbjct: 1463 QTGSTVT 1469
>AF016442-1|AAB65918.1| 340|Caenorhabditis elegans Hypothetical
protein K12B6.3 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.67
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 423 SEYGXS-RYTGFGNTPKQSQSTPMTPIHSGNEVVDNTIATLATGWSMFTSSVSKAARTAT 599
S+YG Y GF T ++ TP+ IH ++ T +++ATGW S S T+
Sbjct: 63 SDYGVKGSYGGFTKTITKASKTPVIFIHGNSDSALKT-SSMATGWDNTISYFSTQGFTSA 121
Query: 600 E 602
E
Sbjct: 122 E 122
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 183 EFFVSQPDYKAGMTIMQK---YNTKAAAMYRQKIAALAEGHSWSPSDYKPEPIEKPPESQ 353
E +S P+ K +M + +N+ + + L HSW P Y + P+ +
Sbjct: 543 ETHISSPNRKQVQDLMNRLETFNSPRQLLQKAAFTGLLLSHSWLPHMYFDALTYRKPDVE 602
Query: 354 TRESYTSGDNVFQSGSE 404
+ E +TS F G++
Sbjct: 603 SIEGFTSALGGFMEGAK 619
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Frame = +3
Query: 333 EKPPESQTRESYTSGDNVFQSGSENNISYHSEYGXSRYTG------------FGNTPKQS 476
+ PP++ R S N+FQ GS S S G + G +P S
Sbjct: 58 QPPPQTWQRTPTMSPANIFQGGSGTPGSQRSSTGTPNHQMGNPPQHQQQQFFHGESPAHS 117
Query: 477 QSTPMTPIHSG 509
Q TPMTP +G
Sbjct: 118 QGTPMTPQSAG 128
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 29.9 bits (64), Expect = 4.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 297 SWSPSDYKPEPIEKPPESQTRESYTSGDNV-FQSGSENNISYHSEYGXSRYTGFGNTPKQ 473
S SP ++P+ PP SQT TSGD + SG +++ S + S + G T
Sbjct: 446 SISPRSFRPKEKAPPPPSQTPS--TSGDLINLHSGDDDDFS--DDQSPSPFNGGSLTRSH 501
Query: 474 SQSTPMTP 497
++ P P
Sbjct: 502 TEHRPNRP 509
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 29.5 bits (63), Expect = 6.2
Identities = 21/93 (22%), Positives = 40/93 (43%)
Frame = +3
Query: 267 QKIAALAEGHSWSPSDYKPEPIEKPPESQTRESYTSGDNVFQSGSENNISYHSEYGXSRY 446
+ + A A H++ EP ++P + +S S + S S+ ++ S+ +
Sbjct: 1748 ENLLARAMPHAFGRIAENQEPEDEPMGGEESDSAASMRSAASSNSQMSMGSSSQQQQQQD 1807
Query: 447 TGFGNTPKQSQSTPMTPIHSGNEVVDNTIATLA 545
+ TP+ S TP TP N+ + + LA
Sbjct: 1808 SDM--TPRDSAGTPSTPRDDKNQTLSVSAPDLA 1838
>U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical
protein F09F9.4 protein.
Length = 654
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = -1
Query: 259 IAAALVLYFCMIVIPAL*SGCDTKNSCALAFPPTNIFSNXYVFPLIHSDRTXE*EVYSKA 80
IA +++ C+I IP L T + P + N Y +I S T V S+
Sbjct: 519 IAIMAIIFICIIFIPPLVCAAVTASMRRNTSPEVPLMDNKYDSEMIRSGNTESTHVSSRN 578
Query: 79 AVNARTI 59
V R+I
Sbjct: 579 YVAKRSI 585
>U41270-3|ABC71846.1| 254|Caenorhabditis elegans Hypothetical
protein AH9.3 protein.
Length = 254
Score = 29.1 bits (62), Expect = 8.2
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = +3
Query: 285 AEGHSWSPSDYKPEPIEKPPESQTRESYTSGDNVFQSGSEN-NISYH-SEYGXSRYTGFG 458
AE D + + P Q R+ + N +Q ++ N++ ++ G S YT
Sbjct: 139 AEKEVKKEGDDEESGAQDPAVIQLRKEIAAAINTYQKQFDDLNLTQRIAQPGISEYTQMV 198
Query: 459 NTPKQSQSTPMTPIHSGNEVVDNTIATLATGWSMFTSSVSKAARTATENAV 611
T K + ST + G + NT+ L + + +A ++A NA+
Sbjct: 199 ITKKLNASTAHIDGYKGKIAMANTVEQLQNLLTEINQQIRRARQSAEINAM 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,150,665
Number of Sequences: 27780
Number of extensions: 441590
Number of successful extensions: 1139
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4162671200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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