Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_C03_e115_05.seq
         (1496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    25   4.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   7.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   7.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   7.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   9.9  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
 Frame = -1

Query: 284 MPPVTRAIVSRPDRSVTCTN----VSLKEANMCA 195
           +PPV R    RP ++ TCT     V L E N  A
Sbjct: 384 LPPVPRCDEQRPHKATTCTEGKSLVPLMERNSTA 417


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 520  SQTAQGSHLQCGQSSCWNEREHGEQTGHQVQ 428
            S+  + +H      S W  R HGE T H  Q
Sbjct: 955  SRYTRWTHRIIRDISAWQGRRHGEMTFHLAQ 985


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 397 GA*CAGQLSPGFYISQQHPVQPT*RRRVKPHHDQP--SLSCL 278
           GA  AG ++ G       P +PT R  VKP  D+P  +L CL
Sbjct: 55  GATGAGAINIGGTTIPIAPKKPTRRAGVKPQPDRPMRALFCL 96


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -2

Query: 520  SQTAQGSHLQCGQSSCWNEREHGEQTGHQVQESLSCYLQSHG 395
            S+  + +HL       W  R HGE T H     LS  L  HG
Sbjct: 903  SRYVRWAHLVIPDVGAWQLRNHGEVTFH-----LSQVLSGHG 939


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 291 HFHASGNTGNSFSTGQIGNVHECVIEG 211
           H H +   GN    G  GN H+ + +G
Sbjct: 128 HHHGNNGGGNGGGGGSGGNAHDHLADG 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,066,096
Number of Sequences: 2352
Number of extensions: 19984
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175156245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)