Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_C03_e115_05.seq
         (1496 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   191   6e-48
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   191   6e-48
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   191   6e-48
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   191   6e-48
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   191   6e-48
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   191   6e-48
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   182   4e-45

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  191 bits (465), Expect = 6e-48
 Identities = 97/139 (69%), Positives = 104/139 (74%)
 Frame = +1

Query: 109 PRXKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMK 288
           PR K K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMK
Sbjct: 3   PR-KGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMK 61

Query: 289 VKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXX 468
           VKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ        
Sbjct: 62  VKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALAR 121

Query: 469 XXMKIGRIEDVTPVPSDST 525
             MKIGRIEDVTP+PSDST
Sbjct: 122 SGMKIGRIEDVTPIPSDST 140


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  182 bits (442), Expect = 4e-45
 Identities = 90/136 (66%), Positives = 98/136 (72%)
 Frame = +1

Query: 118 KNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKA 297
           K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGMKVKA
Sbjct: 5   KGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGMKVKA 64

Query: 298 DRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXM 477
           DRDE+SPYAAML  QDVA++CK LGI ALHI+LRA            AQ          M
Sbjct: 65  DRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALACSGM 124

Query: 478 KIGRIEDVTPVPSDST 525
           KIGRIEDVTP+PSDST
Sbjct: 125 KIGRIEDVTPIPSDST 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,489,115
Number of Sequences: 237096
Number of extensions: 3095421
Number of successful extensions: 6610
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6607
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22197699270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)