Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_C02_e107_06.seq
(1436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 265 5e-71
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 32 1.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 32 1.2
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 265 bits (650), Expect = 5e-71
Identities = 121/211 (57%), Positives = 155/211 (73%), Gaps = 5/211 (2%)
Frame = +2
Query: 122 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 301
MSGG AL+EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEK
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 302 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 481
E+PADV V+S+R + QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 482 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR 661
LL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 662 EVLRLRGVLSRDQRW-----DVVVDLFFYRD 739
E+L LRG +SR + +++ DL+FYRD
Sbjct: 181 EILILRGKISRQTGFVLEGKEIMPDLYFYRD 211
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3124 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3022 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3023 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3105 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 359 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 529
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,795,376
Number of Sequences: 27780
Number of extensions: 417801
Number of successful extensions: 954
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4100231132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -