Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_C01_e099_05.seq
(1438 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 56 4e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 50 5e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 2e-05
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 46 6e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 45 1e-04
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.016
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 37 0.028
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 33 0.35
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.81
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 30 4.3
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 4.3
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 5.7
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 29 7.5
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 7.5
At1g23270.1 68414.m02911 hypothetical protein 29 7.5
At1g69630.1 68414.m08010 F-box family protein contains F-box dom... 29 9.9
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 56.4 bits (130), Expect = 4e-08
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 273 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 449
TD++ +L THL A ++A++Y++ N A + A T ++++ P ++
Sbjct: 21 TDIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTL 72
Query: 450 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 611
L++GG + +D + + +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 73 LSIGGGNADKDA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 49.6 bits (113), Expect = 5e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +3
Query: 273 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 449
TD++ +L THL A + + T ++ + N + T ++R+ P ++
Sbjct: 42 TDIDSSLF--THLFCAFADLNSQTNQVTVSSAN------QPKFSTFTQTVQRRNPSVKTL 93
Query: 450 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 602
L++GG D Y + +P +R +F +S++ +A YGF G+DL W+ P
Sbjct: 94 LSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 142
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 47.6 bits (108), Expect = 2e-05
Identities = 29/101 (28%), Positives = 52/101 (51%)
Frame = +3
Query: 303 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTED 482
THL A + T +V + ++ +N+ I +K++ P ++ L++GG + D
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGRN--AD 91
Query: 483 PQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 605
+ + +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +3
Query: 294 SFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDD 470
S THL A I TY+++ + N + T ++R+ P ++ L++GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 471 DTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 602
+ + +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 99 TYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 44.8 bits (101), Expect = 1e-04
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +3
Query: 192 SPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNEN 371
SPS++ K ++ E+Q + + P+ F THL A + A+++K+
Sbjct: 9 SPSAEVKASYWFPDG----ETQDPITSAETIPSALF-THLFCAFADLDANSHKVF----- 58
Query: 372 LDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSA 545
+ +AH + T +K + PQ++ L++GG + + + + Q+R F +S
Sbjct: 59 --VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNANNSA--FASMASNHQSRKTFIDSW 114
Query: 546 LLLAEQYGFDGIDLSWQLP 602
+ +A GF G+DL+W+ P
Sbjct: 115 IFIARSNGFHGLDLAWEYP 133
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.016
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 501 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 605
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 37.1 bits (82), Expect = 0.028
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +3
Query: 228 DSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRA 407
D KS E ++ P+ + F THL A + + T+++ N + +
Sbjct: 22 DGKSQSPECLSQGTPSSFIDSTLF-THLFCAFADVDSSTHEVTISAAN------SYQFSS 74
Query: 408 ITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGID 584
T +K + ++ L++GG D D + + + R AF +S++ +A + F G+D
Sbjct: 75 FTETVKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLD 132
Query: 585 LSWQLP 602
L+W+ P
Sbjct: 133 LAWEYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.5 bits (73), Expect = 0.35
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +3
Query: 417 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 596
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 597 LP 602
P
Sbjct: 129 YP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.81
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 501 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 602
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 190 HHLVAKAKSSATMTARAISEN-LKHVCCLRTWSLLFRSAPICCTNLPASKLT 342
H V K +AR + N + H C+ W + S P+C LPA LT
Sbjct: 200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLT 251
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 567 GFDGIDLSWQLPKRKPKKIRSSI 635
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 295 RSAPICCTNLPASKLTHIKWFHSM 366
RS PIC T P+S +H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 9/140 (6%)
Frame = +3
Query: 246 RESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKR 425
R A P + A S +H++ ++ + AD ++ NE +D A + N
Sbjct: 201 RSHSAPSSPILAQEANSIISHVMVEN--LVADHSLDLATNEFIDAATALPSLEPQRNPNM 258
Query: 426 QFPQLRVFLT---VGGDDDTEDPQKYNLLL-----ESPQARTAFTNSALLLAEQYGFDGI 581
+P+L + VG + N L E+P + F + A L F+ +
Sbjct: 259 DWPELALDSNPQIVGSEGKLRRVFSSNATLGFKLPENPSGASRFASEARQLKRSRSFETL 318
Query: 582 DLSW-QLPKRKPKKIRSSIG 638
+LSW + + KIR+S G
Sbjct: 319 NLSWNDIKEEDGDKIRNSYG 338
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 805 GAIYVGKXLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVV 671
GA Y + ++ ILG +AC++ + A+ P L S S S T ++
Sbjct: 241 GARYWDEDVMVGVILGTGTNACYVEQKHAI-PKLRSKSSSGTTII 284
>At1g23270.1 68414.m02911 hypothetical protein
Length = 180
Score = 29.1 bits (62), Expect = 7.5
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = -1
Query: 634 ILERIFFGFLFGNCQDRSIPSKPYCSARRRAEL-VKAVRACGDSNKRLYFCGSSVSSSPP 458
+LE++ G D ++P+ P RR L V + S K+L +S++S P
Sbjct: 25 VLEQVAKINCSGFTDDTALPTNPETRLRRLKSLPVSRTDSVSSSPKKLLSHSNSMASHPE 84
Query: 457 TVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNERAGSK 278
K R + + F I +C S + ET ++ + SR E +GSK
Sbjct: 85 --KKYRGNVSSVSSFSIQVGKSCPLDSS---VEETQIFSKTKRNQSVKSRGGLGESSGSK 139
Query: 277 SVGS 266
+GS
Sbjct: 140 RIGS 143
>At1g69630.1 68414.m08010 F-box family protein contains F-box domain
Pfam:PF00646
Length = 451
Score = 28.7 bits (61), Expect = 9.9
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = -1
Query: 868 VKCLDVXNVDQVYDAWDVKVNGAIYVGKXLITNCILGFTL-SACFISRTRAVKPSLCSDS 692
V+ +DV +D Y +W+V++ +IY + L++ + G TL S F+S PSL
Sbjct: 121 VQHIDV--LDDSYGSWEVQLPSSIYTCESLVSLKLCGLTLASPEFVS-----LPSLKVMD 173
Query: 691 LSSTGVVPNVFL-MLCQKDPILERI 620
L T ++ L L K P+LE +
Sbjct: 174 LIITKFADDMGLETLITKCPVLESL 198
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,808,926
Number of Sequences: 28952
Number of extensions: 392241
Number of successful extensions: 1036
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 3797605248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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