Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_B08_e154_04.seq
         (1521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.088
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   1.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   5.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 0.088
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +1

Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXPPXQXP 750
           G P     + PPG   PP    P     P PP  GG    PPG      P   P
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTP---TQPQPPRPGGMYPQPPGVPMPMRPQMPP 234



 Score = 26.6 bits (56), Expect = 1.9
 Identities = 30/124 (24%), Positives = 33/124 (26%), Gaps = 4/124 (3%)
 Frame = +1

Query: 553 NXPPPXRXXXRGGXPXQXGXLXP--PGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNX 726
           N  PP         P + G + P  PG   P     P G  P   P  G     P     
Sbjct: 197 NVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP--GMQPRPPSAQGM 254

Query: 727 GXPPX--QXPXXXXX*AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPG 900
             PP   Q P          P                 G    P  P P+ GG P   P 
Sbjct: 255 QRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQ 314

Query: 901 GALP 912
           G  P
Sbjct: 315 GMRP 318


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.4
 Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
 Frame = +2

Query: 905  RFP-GXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPP 1042
            RFP G   +    P P  PP     PP  P  G    G     PP P
Sbjct: 568  RFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.4 bits (53), Expect = 4.4
 Identities = 12/38 (31%), Positives = 13/38 (34%)
 Frame = +1

Query: 622 PGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXP 735
           P  + PP    P    PP  P  GG    P G     P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 1.9
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = +1

Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPG 717
           G P + G L  PG    P D  P+G   P  P         PG
Sbjct: 137 GYPGEKGDLGTPGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPG 179


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = -1

Query: 1041 GGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXXXITPXPGKRPPGXXXGG 880
            GGGG G  +P       G   G   P GG  G G          +R  G   GG
Sbjct: 203  GGGGSGGGAPGGG----GGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 25.0 bits (52), Expect = 5.8
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 683 GGXGGXXPRGXQSXGGXXXPGG 618
           GG GG  P G     G   PGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGG 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,922
Number of Sequences: 2352
Number of extensions: 11826
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178407405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)