Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_B08_e154_04.seq
(1521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 46 9e-05
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 46 9e-05
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 46 9e-05
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.033
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.033
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.033
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.17
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 34 0.23
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 34 0.30
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.30
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.30
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 33 0.40
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.40
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.53
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.93
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.93
Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 2.1
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 31 2.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 2.8
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 31 2.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 2.8
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 30 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 30 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.5
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 6.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 8.7
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 8.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 8.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 45.6 bits (103), Expect = 9e-05
Identities = 29/78 (37%), Positives = 30/78 (38%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G PP PGG P I P P PP G PP P G G P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPP----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP--PPPPP 789
Query: 1040 PXXXXPXAGXXXXXXPPQ 1093
P P A PP+
Sbjct: 790 PGMFAPMAPVIPDYLPPK 807
Score = 37.5 bits (83), Expect = 0.025
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 860 PPXXXG-APPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPP 1036
PP + P GG + P P PP PP P G + P PP
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 1037 PPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP P +G PP PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 942 PXPRPXPRGXSXPPXXPPXXGXXWXTXXPLPPPP 1043
P P P P G PP PP G + P PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 45.6 bits (103), Expect = 9e-05
Identities = 29/78 (37%), Positives = 30/78 (38%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G PP PGG P I P P PP G PP P G G P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPP----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP--PPPPP 789
Query: 1040 PXXXXPXAGXXXXXXPPQ 1093
P P A PP+
Sbjct: 790 PGMFAPMAPVIPDYLPPK 807
Score = 37.5 bits (83), Expect = 0.025
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 860 PPXXXG-APPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPP 1036
PP + P GG + P P PP PP P G + P PP
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Query: 1037 PPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP P +G PP PP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 942 PXPRPXPRGXSXPPXXPPXXGXXWXTXXPLPPPP 1043
P P P P G PP PP G + P PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 45.6 bits (103), Expect = 9e-05
Identities = 29/78 (37%), Positives = 30/78 (38%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G PP PGG P I P P PP G PP P G G P PPP
Sbjct: 319 PPITGGPPPPPPPGGLPP----ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP--PPPPP 372
Query: 1040 PXXXXPXAGXXXXXXPPQ 1093
P P A PP+
Sbjct: 373 PGMFAPMAPVIPDYLPPK 390
Score = 37.5 bits (83), Expect = 0.025
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 1/85 (1%)
Frame = +2
Query: 860 PPXXXG-APPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPP 1036
PP + P GG + P P PP PP P G + P PP
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Query: 1037 PPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP P +G PP PP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 942 PXPRPXPRGXSXPPXXPPXXGXXWXTXXPLPPPP 1043
P P P P G PP PP G + P PPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPG-GFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.033
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDP-TPXXPPXGXXXPPLXPSXGXLXVGDX-XPXP 1033
PP G+PP G P P T PP PP P+ G P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 1034 PPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PPP P G PPQ SPP
Sbjct: 300 PPPPRGSPPTG---SLPPPQAGGSPP 322
Score = 33.1 bits (72), Expect = 0.53
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 956 PPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP G PP P G P PPPP P PP PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Score = 33.1 bits (72), Expect = 0.53
Identities = 44/148 (29%), Positives = 47/148 (31%), Gaps = 10/148 (6%)
Frame = +1
Query: 655 PRGXXPPXPPXXG-----GXXNXPPGXNXGXPPXQXPXXXXX*AXAXPXXIKKGXKXRXP 819
P G PP PP G G + PP G PP P G P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG---SP 289
Query: 820 PXALPGXAXXPXXPXPLXGGXPXXXPGGAL--PRXGGYXXXRSHXXXPXXGXXXXPPXXL 993
P P A P P P G P G+L P+ GG P PP
Sbjct: 290 P---PPRAGSPPPPPPPRGSPPT----GSLPPPQAGG-------SPPPAGTGSPPPPPRQ 335
Query: 994 XRXAXXGXXXTXSPP---PPXXXPXRGG 1068
R A T SPP PP P RGG
Sbjct: 336 KRQAPERSPPTGSPPTGSPPTGRPPRGG 363
Score = 32.7 bits (71), Expect = 0.70
Identities = 44/175 (25%), Positives = 45/175 (25%), Gaps = 11/175 (6%)
Frame = +1
Query: 595 PXQXGXLXPPGXKXPPXDWXPRGXXPPX---PPXXGGXXNXPPGXNXGXPPXQXPXXXXX 765
P G PP PP PRG P PP GG PP G PP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPP--------- 330
Query: 766 *AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPGGAL---PRXGGYXXX 936
P K+ R PP P P P G PR G
Sbjct: 331 ----PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP 386
Query: 937 RS--HXXXPXXGXXXXPPXXLXRXAXXGXXXTXSPP---PPXXXPXRGGXXXXXP 1086
R P R G T SPP PP P G P
Sbjct: 387 RGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 441
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 941 PTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
P P PP G PPL S G PPPP P PP SPP
Sbjct: 237 PPPPPPPKGS--PPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G+PP P P G + PP G PP P P P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Query: 1040 PXXXXP 1057
P P
Sbjct: 350 PTGSPP 355
Score = 29.9 bits (64), Expect = 5.0
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 848 TXXXPPXXXGAPPXXXPGGRFPGXGVIXXXDPTP--XXPPXGXXXPPLXPSXGXLXVGDX 1021
T PP G+PP GG P P P PP G PP G
Sbjct: 269 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP-PAGTG 327
Query: 1022 XPXPPP 1039
P PPP
Sbjct: 328 SPPPPP 333
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 1025 PXPPPPXXXXPXAGXXXXXXPPQXFXSPPXXT 1120
P PPPP P AG PP PP T
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT 269
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +3
Query: 636 PPXRLXTXGXPPPXT----PPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGP 779
PP R T PPP T PP GG PPR P G+ P S P
Sbjct: 265 PPPR--TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.033
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDP-TPXXPPXGXXXPPLXPSXGXLXVGDX-XPXP 1033
PP G+PP G P P T PP PP P+ G P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 1034 PPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PPP P G PPQ SPP
Sbjct: 321 PPPPRGSPPTG---SLPPPQAGGSPP 343
Score = 33.1 bits (72), Expect = 0.53
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 956 PPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP G PP P G P PPPP P PP PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Score = 33.1 bits (72), Expect = 0.53
Identities = 44/148 (29%), Positives = 47/148 (31%), Gaps = 10/148 (6%)
Frame = +1
Query: 655 PRGXXPPXPPXXG-----GXXNXPPGXNXGXPPXQXPXXXXX*AXAXPXXIKKGXKXRXP 819
P G PP PP G G + PP G PP P G P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG---SP 310
Query: 820 PXALPGXAXXPXXPXPLXGGXPXXXPGGAL--PRXGGYXXXRSHXXXPXXGXXXXPPXXL 993
P P A P P P G P G+L P+ GG P PP
Sbjct: 311 P---PPRAGSPPPPPPPRGSPPT----GSLPPPQAGG-------SPPPAGTGSPPPPPRQ 356
Query: 994 XRXAXXGXXXTXSPP---PPXXXPXRGG 1068
R A T SPP PP P RGG
Sbjct: 357 KRQAPERSPPTGSPPTGSPPTGRPPRGG 384
Score = 32.7 bits (71), Expect = 0.70
Identities = 44/175 (25%), Positives = 45/175 (25%), Gaps = 11/175 (6%)
Frame = +1
Query: 595 PXQXGXLXPPGXKXPPXDWXPRGXXPPX---PPXXGGXXNXPPGXNXGXPPXQXPXXXXX 765
P G PP PP PRG P PP GG PP G PP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPP--------- 351
Query: 766 *AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPGGAL---PRXGGYXXX 936
P K+ R PP P P P G PR G
Sbjct: 352 ----PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP 407
Query: 937 RS--HXXXPXXGXXXXPPXXLXRXAXXGXXXTXSPP---PPXXXPXRGGXXXXXP 1086
R P R G T SPP PP P G P
Sbjct: 408 RGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 462
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 941 PTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
P P PP G PPL S G PPPP P PP SPP
Sbjct: 258 PPPPPPPKGS--PPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G+PP P P G + PP G PP P P P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Query: 1040 PXXXXP 1057
P P
Sbjct: 371 PTGSPP 376
Score = 29.9 bits (64), Expect = 5.0
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 848 TXXXPPXXXGAPPXXXPGGRFPGXGVIXXXDPTP--XXPPXGXXXPPLXPSXGXLXVGDX 1021
T PP G+PP GG P P P PP G PP G
Sbjct: 290 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP-PAGTG 348
Query: 1022 XPXPPP 1039
P PPP
Sbjct: 349 SPPPPP 354
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 1025 PXPPPPXXXXPXAGXXXXXXPPQXFXSPPXXT 1120
P PPPP P AG PP PP T
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT 290
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +3
Query: 636 PPXRLXTXGXPPPXT----PPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGP 779
PP R T PPP T PP GG PPR P G+ P S P
Sbjct: 286 PPPR--TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.033
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDP-TPXXPPXGXXXPPLXPSXGXLXVGDX-XPXP 1033
PP G+PP G P P T PP PP P+ G P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 1034 PPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PPP P G PPQ SPP
Sbjct: 306 PPPPRGSPPTG---SLPPPQAGGSPP 328
Score = 33.1 bits (72), Expect = 0.53
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +2
Query: 956 PPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PP G PP P G P PPPP P PP PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Score = 33.1 bits (72), Expect = 0.53
Identities = 44/148 (29%), Positives = 47/148 (31%), Gaps = 10/148 (6%)
Frame = +1
Query: 655 PRGXXPPXPPXXG-----GXXNXPPGXNXGXPPXQXPXXXXX*AXAXPXXIKKGXKXRXP 819
P G PP PP G G + PP G PP P G P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG---SP 295
Query: 820 PXALPGXAXXPXXPXPLXGGXPXXXPGGAL--PRXGGYXXXRSHXXXPXXGXXXXPPXXL 993
P P A P P P G P G+L P+ GG P PP
Sbjct: 296 P---PPRAGSPPPPPPPRGSPPT----GSLPPPQAGG-------SPPPAGTGSPPPPPRQ 341
Query: 994 XRXAXXGXXXTXSPP---PPXXXPXRGG 1068
R A T SPP PP P RGG
Sbjct: 342 KRQAPERSPPTGSPPTGSPPTGRPPRGG 369
Score = 32.7 bits (71), Expect = 0.70
Identities = 44/175 (25%), Positives = 45/175 (25%), Gaps = 11/175 (6%)
Frame = +1
Query: 595 PXQXGXLXPPGXKXPPXDWXPRGXXPPX---PPXXGGXXNXPPGXNXGXPPXQXPXXXXX 765
P G PP PP PRG P PP GG PP G PP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPP--------- 336
Query: 766 *AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPGGAL---PRXGGYXXX 936
P K+ R PP P P P G PR G
Sbjct: 337 ----PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGP 392
Query: 937 RS--HXXXPXXGXXXXPPXXLXRXAXXGXXXTXSPP---PPXXXPXRGGXXXXXP 1086
R P R G T SPP PP P G P
Sbjct: 393 RGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 447
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 941 PTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
P P PP G PPL S G PPPP P PP SPP
Sbjct: 243 PPPPPPPKGS--PPLAGS-GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPP 1039
PP G+PP P P G + PP G PP P P P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Query: 1040 PXXXXP 1057
P P
Sbjct: 356 PTGSPP 361
Score = 29.9 bits (64), Expect = 5.0
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 848 TXXXPPXXXGAPPXXXPGGRFPGXGVIXXXDPTP--XXPPXGXXXPPLXPSXGXLXVGDX 1021
T PP G+PP GG P P P PP G PP G
Sbjct: 275 TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP-PAGTG 333
Query: 1022 XPXPPP 1039
P PPP
Sbjct: 334 SPPPPP 339
Score = 29.5 bits (63), Expect = 6.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 1025 PXPPPPXXXXPXAGXXXXXXPPQXFXSPPXXT 1120
P PPPP P AG PP PP T
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT 275
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +3
Query: 636 PPXRLXTXGXPPPXT----PPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGP 779
PP R T PPP T PP GG PPR P G+ P S P
Sbjct: 271 PPPR--TGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 34.7 bits (76), Expect = 0.17
Identities = 38/146 (26%), Positives = 41/146 (28%), Gaps = 12/146 (8%)
Frame = +1
Query: 523 GXGXSXXXXXNXPPPXRXXXRG-----GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPX 687
G G S PPP + G G G P G P P G PP PP
Sbjct: 137 GKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPG--PPGPPG 194
Query: 688 XGGXXNXP-----PGXNXGXPPXQXPXXXXX*AXAXPXXIKKGXKXRXPPXALPGXAXXP 852
G PG + P P P A PG A P
Sbjct: 195 PAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPP 254
Query: 853 XXPXPLXGGXPXXXPGGALP--RXGG 924
P P P PG A P + GG
Sbjct: 255 GPPGPAGAPGPDGNPGTAGPPGKAGG 280
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 34.3 bits (75), Expect = 0.23
Identities = 35/144 (24%), Positives = 39/144 (27%), Gaps = 10/144 (6%)
Frame = +1
Query: 523 GXGXSXXXXXNXPPPXRXXXRG--GXPXQXGXLXPPG------XKXPPXDWXPRGXXPPX 678
G G + PPP + G G P G P G P P G P
Sbjct: 136 GKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGPA 195
Query: 679 PPXXGGXXNXPPGXNXGXPPXQXPXXXXX*AXAXPXXIKKGXKXRXPPXALPGXAXXPXX 858
P PG + P P P A PG A P
Sbjct: 196 GPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGP 255
Query: 859 PXPLXGGXPXXXPGGALP--RXGG 924
P P P PG A P + GG
Sbjct: 256 PGPAGAPGPDGNPGTAGPPGKAGG 279
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 33.9 bits (74), Expect = 0.30
Identities = 24/84 (28%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Frame = -1
Query: 1107 GEXXXWGGXXXXXXPAXGXXXXG-GGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXX 931
G WGG + G G GGG G G RGG G G GS
Sbjct: 33 GSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGG 92
Query: 930 XITPXPGKRPPGXXXGGAPXQXGG 859
G + G GG GG
Sbjct: 93 W-----GGQDGGSSAGGWGGSQGG 111
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXG-XXXPPLXPSXGXLXVGDXXPXPP 1036
PP G PP PG R+PG P P P G PP PS PP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGG---MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Query: 1037 PP 1042
PP
Sbjct: 384 PP 385
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Frame = +2
Query: 860 PPXXXGA--PPXXXPGGRFPGXGVIXXXDPTP----XXPPXGXXXPPLXPSXGXLXVGDX 1021
PP G PP P GR PG + P P PP PP P G G
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGM 347
Query: 1022 XPXPPPPXXXXPXAGXXXXXXPP 1090
P PPP P AG PP
Sbjct: 348 PPPPPP---RYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.30
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXG-XXXPPLXPSXGXLXVGDXXPXPP 1036
PP G PP PG R+PG P P P G PP PS PP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGG---MPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Query: 1037 PP 1042
PP
Sbjct: 394 PP 395
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Frame = +2
Query: 860 PPXXXGA--PPXXXPGGRFPGXGVIXXXDPTP----XXPPXGXXXPPLXPSXGXLXVGDX 1021
PP G PP P GR PG + P P PP PP P G G
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP-PPPPGMRYPGGM 357
Query: 1022 XPXPPPPXXXXPXAGXXXXXXPP 1090
P PPP P AG PP
Sbjct: 358 PPPPPP---RYPSAGPGMYPPPP 377
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical protein
T01C3.7 protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.40
Identities = 24/72 (33%), Positives = 25/72 (34%)
Frame = -1
Query: 1041 GGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXXXITPXPGKRPPGXXXGGAPXQXG 862
GGG G G GG P GG G GS P G+ P GGA G
Sbjct: 59 GGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGS-----PRGGRGSPRGGRGGAGGMRG 113
Query: 861 GXXXVXXXPRXG 826
G V R G
Sbjct: 114 GKTVVVEPHRLG 125
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.5 bits (73), Expect = 0.40
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 157 PSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFD 216
Query: 744 XTGATPXLSXGPSXXYK-KGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 217 PSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 256
Score = 33.1 bits (72), Expect = 0.53
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 367 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 426
Query: 744 XTGATPXLSXGPSXXYK-KGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 427 PSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 466
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 232 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 291
Query: 744 XTGATPXLSXGPSXXY-KKGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 292 PSGAPP--SGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGP 331
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 307 PSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 366
Query: 744 XTGATPXLSXGPSXXY-KKGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 367 PSGAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 406
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 352 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 411
Query: 744 XTGATPXLSXGPSXXYK-KGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 412 PSGAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGP 451
Score = 32.7 bits (71), Expect = 0.70
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 412 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 471
Query: 744 XTGATPXLSXGPSXXY-KKGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 472 PSGAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 511
Score = 32.3 bits (70), Expect = 0.93
Identities = 25/96 (26%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = +3
Query: 582 TGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLXXTGATP 761
+G P S GPP G PP PP G P P + A P
Sbjct: 148 SGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPP 207
Query: 762 XLSXGPSXXY-KKGXXXTXAPXXPXGXSXXPXRXXP 866
S GP+ + G + P P S P P
Sbjct: 208 --SGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 241
Score = 32.3 bits (70), Expect = 0.93
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 292 PSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFN 351
Query: 744 XTGATPXLSXGPSXXY-KKGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 352 PSGAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 391
Score = 29.5 bits (63), Expect = 6.5
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = +2
Query: 875 GAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXX 1054
GAPP P G F G P P G PP G P PP
Sbjct: 264 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG--APPSGGPPGPFDPSGAQPSGGPPGPFN 321
Query: 1055 PXAGXXXXXXPPQXF 1099
P +G PP F
Sbjct: 322 P-SGAPPSGGPPGPF 335
Score = 29.5 bits (63), Expect = 6.5
Identities = 25/102 (24%), Positives = 29/102 (28%), Gaps = 1/102 (0%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G P PP P P
Sbjct: 277 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFD 336
Query: 744 XTGATPXLSXGPSXXYK-KGXXXTXAPXXPXGXSXXPXRXXP 866
+GA P S GP + G + P P S P P
Sbjct: 337 PSGAPP--SGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 376
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +3
Query: 564 PXXEXXTGRAPXTXXXSXXSRXXGPPXRLXTXGXPPPXTPPXGGGXKXPPRXKXXXSPLX 743
P +G P S GPP G PP PP P P
Sbjct: 217 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 276
Query: 744 XTGATPXLSXGP 779
+GA P S GP
Sbjct: 277 PSGAPP--SGGP 286
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = +2
Query: 875 GAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVGDXXPXPPPPXXXX 1054
GAPP P G F G P P G PP G P PP
Sbjct: 354 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG--APPSGGPPGPFDPSGAPPSGGPPGPFN 411
Query: 1055 PXAGXXXXXXPPQXF 1099
P +G PP F
Sbjct: 412 P-SGAPPSGGPPGPF 425
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.53
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +3
Query: 948 PRPXPRGXSXPPXXPPXXG--XXWXTXXPLPPPPXXXXQXRGXXGGAXXPRXSPPP 1109
PRP P S P PP G T P+PPPP GA P PPP
Sbjct: 531 PRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQN--LSGAPPPPPPPPP 584
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 881 PPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXV-GDXXPXPPPP 1042
PP PG P P PP PP P G L G P PPPP
Sbjct: 511 PPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPP-PPIAGLLAANGTNVPIPPPP 564
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 32.3 bits (70), Expect = 0.93
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGX--XNXPPGXNXGXPPXQXP 750
G P + G PPG PP P PP PP G + PPG + P P
Sbjct: 213 GAPGEPGDSGPPGPPGPPG--APGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/104 (27%), Positives = 30/104 (28%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXPPXQXPXXXXX* 768
G P + G PG P PRG PP P G P G P P
Sbjct: 160 GDPGEAGTPGRPGTDAAPGSPGPRG--PPGPAGEAGAPG--PAGEPGTPAISEPLTPG-- 213
Query: 769 AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPG 900
A P G P PG P P P P PG
Sbjct: 214 APGEPG--DSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPG 255
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 32.3 bits (70), Expect = 0.93
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGX--XNXPPGXNXGXPPXQXP 750
G P + G PPG PP P PP PP G + PPG + P P
Sbjct: 213 GAPGEPGDSGPPGPPGPPG--APGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/104 (27%), Positives = 30/104 (28%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXPPXQXPXXXXX* 768
G P + G PG P PRG PP P G P G P P
Sbjct: 160 GDPGEAGTPGRPGTDAAPGSPGPRG--PPGPAGEAGAPG--PAGEPGTPAISEPLTPG-- 213
Query: 769 AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPG 900
A P G P PG P P P P PG
Sbjct: 214 APGEPG--DSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPG 255
>Z93377-1|CAB07573.1| 340|Caenorhabditis elegans Hypothetical protein
F13A7.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = -1
Query: 1056 GXXXXGGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXXXITPXPGKRPPGXXXGGA 877
G G G + G GG GG G G +T G G GGA
Sbjct: 123 GSKAQGSVAQGSAVQGSAVQGAGGGGGGASAGGGAAGAGGASQMTAAQGSAAQGAGGGGA 182
Query: 876 PXQ 868
Q
Sbjct: 183 VSQ 185
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/104 (27%), Positives = 30/104 (28%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXPPXQXPXXXXX* 768
G P + G PG P PRG PP P G P G P P
Sbjct: 165 GDPGEAGTPGRPGTDAAPGSPGPRG--PPGPAGEAGAPG--PAGEPGTPAISEPLTPG-- 218
Query: 769 AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPG 900
A P G P PG P P P P PG
Sbjct: 219 APGEPG--DSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPG 260
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGX--XNXPPGXNXGXPPXQXP 750
G P + G PPG PP P PP PP G + PPG + P P
Sbjct: 218 GAPGEPGDSGPPGPPGPPG--APGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -3
Query: 1108 GGGEXLGXXAPPXXPRXWXXXXGGGGXGXSVXHXKPXXGGXXGGXXXPLGXGRG 947
GGG G APP P GGGG G GG GG G G G
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -3
Query: 1108 GGGEXLGXXAPPXXPRXWXXXXGGGGXGXSVXHXKPXXGGXXGGXXXPLGXGRG 947
GGG G APP P GGGG G GG GG G G G
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGG 154
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 939 IPXPRPXPRGXSXPPXXPPXXGXXWXTXXPLPPPPXXXXQXRGXXGGAXXPRXSPPP 1109
+P P G PP PP P PPPP +G G PPP
Sbjct: 525 MPGMAPLSTGAPTPPPPPPVG---MANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPP 578
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXPPXQ 744
G P G + PPG P P PP P G P PP Q
Sbjct: 259 GPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQ 310
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 31.1 bits (67), Expect = 2.1
Identities = 26/88 (29%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Frame = +2
Query: 860 PPXXXGAPPXXXPGGRFPGXGVIXXXDPTPXXPPXGXXXPPLXPSXGXLXVG----DXXP 1027
PP APP PG + P P G PL P L +G P
Sbjct: 268 PPPMGTAPPTSVADAP-PGVDMSSDLPPGVESAP-GASVAPLLPGGLDLNLGLPPLGFNP 325
Query: 1028 XPPPPXXXXPXAGXXXXXXPPQXFXSPP 1111
PPP P G PP F PP
Sbjct: 326 NMPPPGM--PPMGMMSTSLPPPGFAMPP 351
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 1/81 (1%)
Frame = +2
Query: 818 PRXPXRGXXXTXXXPPXXXGAPPXXXPGGRFPGXGVIXXXDPT-PXXPPXGXXXPPLXPS 994
P P PP G PP G FP + P+ P P G P P
Sbjct: 212 PGAPQVPQAPNSFIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPP 271
Query: 995 XGXLXVGDXXPXPPPPXXXXP 1057
V P PP P
Sbjct: 272 GASAPVAPGMPGAFPPGQGGP 292
Score = 30.7 bits (66), Expect = 2.8
Identities = 29/113 (25%), Positives = 32/113 (28%), Gaps = 2/113 (1%)
Frame = +1
Query: 595 PXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPG--XNXGXPPXQXPXXXXX* 768
P PPG P G PP P G + P G P P
Sbjct: 218 PQAPNSFIPPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPV 277
Query: 769 AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPGGALPRXGGY 927
A P G P + P A P P + G PG P GGY
Sbjct: 278 APGMPGAFPPGQGGPGMPGSFPPGAPGPGGPG-MPGSFAPGAPGPGGP--GGY 327
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +1
Query: 529 GXSXXXXXNXPP-PXRXXXRGGXPXQXGXLXPPGXKXPPXD--WXPRGXXPPXPPXXGGX 699
G S PP P R G P G + PG D P PP PP G
Sbjct: 232 GQSGGSALPGPPGPAGSPGRSGQPGSNGNVGAPGAPGQVVDVPGAPGPAGPPGPPGPSGA 291
Query: 700 XNXPPGXNXGXPPXQXP 750
P P P
Sbjct: 292 PGHPGQAGSSLPGAPGP 308
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/83 (22%), Positives = 20/83 (24%)
Frame = -1
Query: 1110 GGEXXXWGGXXXXXXPAXGXXXXGGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXX 931
GG+ GG G GG G G GG GG G
Sbjct: 324 GGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGG 383
Query: 930 XITPXPGKRPPGXXXGGAPXQXG 862
P P AP G
Sbjct: 384 GGAPQAAPAPQAAPAPAAPAGGG 406
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 30.3 bits (65), Expect = 3.7
Identities = 29/114 (25%), Positives = 32/114 (28%)
Frame = -1
Query: 1209 GXGXRXIYXXTXXGGXPSPLXXXXVXXQXXVFXGGEXXXWGGXXXXXXPAXGXXXXGGGG 1030
G R + T GG P GG +GG P G GGGG
Sbjct: 139 GGAPRGVSTMTAVGGAPGGASTMTAM-------GGGPSAFGGAPP---PPSGSAMGGGGG 188
Query: 1029 XGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXXXITPXPGKRPPGXXXGGAPXQ 868
G S GG GVG + G G GG P Q
Sbjct: 189 GGATSAYFGVGSGAMGGGGAGAQSAYFGVGG-GPVGGGGGGAKSGGGGGGIPGQ 241
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 666 PPPXTPPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGPSXXYKKGXXXT 812
PPP PP G G PP + L + TP L+ ++G T
Sbjct: 235 PPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSLAEQLKMRSQQGLKAT 283
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 30.3 bits (65), Expect = 3.7
Identities = 30/119 (25%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Frame = +1
Query: 559 PPPXRXXXRGGXPXQXGXLXPPGXKXPPXD----WXPRGXXPPXPPXXGGXXNXPPGXNX 726
P P + G P Q G PPG + P D P P P GG +
Sbjct: 148 PGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGTPGAS 207
Query: 727 GXPPXQXPXXXXX*AXAXPXXIKKGXKXRXPPXALPGXAXXPXXPXPLXGGXPXXXPGG 903
G P Q P G + P PG + P G P PGG
Sbjct: 208 GRPGPQGPAGAPGQPGRSGGAGTPGPQGPPGPSGQPGHSGNDGVPG--TPGNP-GAPGG 263
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 666 PPPXTPPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGPSXXYKKGXXXT 812
PPP PP G G PP + L + TP L+ ++G T
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSLAEQLKMRSQQGLKAT 269
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 666 PPPXTPPXGGGXKXPPRXKXXXSPLXXTGATPXLSXGPSXXYKKGXXXT 812
PPP PP G G PP + L + TP L+ ++G T
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSLAEQLKMRSQQGLKAT 269
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/110 (20%), Positives = 29/110 (26%), Gaps = 1/110 (0%)
Frame = -2
Query: 911 GSAPPGXXXGXPPXXGXGXXGXXAXPGRAXGGXRXXXPFFIXXGXAXA*XWXXXGXXXGG 732
G + G P G G G + G + G + + G GG
Sbjct: 194 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGG 253
Query: 731 XPXF-XPGGXFXXPPXXGGXGGXXPRGXQSXGGXXXPGGXRXPXCXGXPP 585
GG + G GG G S G GG PP
Sbjct: 254 YSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPP 303
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/84 (23%), Positives = 21/84 (25%)
Frame = -1
Query: 1110 GGEXXXWGGXXXXXXPAXGXXXXGGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXX 931
GGE GG GG G S + S G GG G
Sbjct: 353 GGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSSSSSSGGYS 412
Query: 930 XITPXPGKRPPGXXXGGAPXQXGG 859
G G GG GG
Sbjct: 413 S-----GGGDAGASSGGESSSAGG 431
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/110 (20%), Positives = 29/110 (26%), Gaps = 1/110 (0%)
Frame = -2
Query: 911 GSAPPGXXXGXPPXXGXGXXGXXAXPGRAXGGXRXXXPFFIXXGXAXA*XWXXXGXXXGG 732
G + G P G G G + G + G + + G GG
Sbjct: 194 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGG 253
Query: 731 XPXF-XPGGXFXXPPXXGGXGGXXPRGXQSXGGXXXPGGXRXPXCXGXPP 585
GG + G GG G S G GG PP
Sbjct: 254 YSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPP 303
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/84 (23%), Positives = 21/84 (25%)
Frame = -1
Query: 1110 GGEXXXWGGXXXXXXPAXGXXXXGGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXX 931
GGE GG GG G S + S G GG G
Sbjct: 353 GGESSSSGGSSYSSGGDSSSSSGGGYSSGGDSSSSSSSSGGYSGGSDSSSSSSSSSGGYS 412
Query: 930 XITPXPGKRPPGXXXGGAPXQXGG 859
G G GG GG
Sbjct: 413 S-----GGGDAGASSGGESSSAGG 431
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/81 (28%), Positives = 25/81 (30%)
Frame = -1
Query: 1110 GGEXXXWGGXXXXXXPAXGXXXXGGGGXGXXSPTXSXPXEGXRGGXXXPXGGXXGVGSXX 931
GG +GG P G GGGG G S GG GVG
Sbjct: 271 GGGPSAFGGAPP---PPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGG-G 326
Query: 930 XITPXPGKRPPGXXXGGAPXQ 868
+ G G GG P Q
Sbjct: 327 PVGGGGGGAKSGGGGGGIPGQ 347
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 939 IPXPRPXPRGXSXPPXXPPXXGXXWXTXXPLPPPP 1043
+P P+ S PP PP + P PPPP
Sbjct: 110 VPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPP 144
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 666 PPPXTPPXGGGXKXPP 713
PPP PP GGG + PP
Sbjct: 40 PPPPPPPCGGGYEAPP 55
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +1
Query: 589 GXPXQXGXLXPPGXKXPPXDWXPRGXXPPXPPXXGGXXNXPPGXNXGXP 735
G P + G PPG P + P+G PP P G P N G P
Sbjct: 214 GQPGEPGAQGPPGEDGRPGNSGPQG--PPGPQGEPGQDGAP--GNPGAP 258
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 633 GPPXRLXTXGXPPPXTPPXGGGXKXP 710
GPP RL G PPP PP GG P
Sbjct: 1591 GPPPRL---GMPPPGPPPPNGGPPPP 1613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,191,165
Number of Sequences: 27780
Number of extensions: 359933
Number of successful extensions: 2212
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4369516058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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