Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_B07_e146_03.seq
         (1430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    39   1e-04
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   6.5  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 38.7 bits (86), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 15  LPVAKYDFDDEAFNEISDDAKDFIGKLLVKDKDDRLQASATLTHPWLIQ 161
           +    YD+    ++ ++ +AK+ I ++L  +   R+ AS  L HPW+ Q
Sbjct: 124 IKTGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 172


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 267 MGAKFEDVHEECGXKNGE 320
           +  KF D+ E+C  +NG+
Sbjct: 368 IACKFADIKEKCDRRNGK 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,673
Number of Sequences: 438
Number of extensions: 2143
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 49946208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)