Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_B04_e122_04.seq
(1469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 36 0.081
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544... 33 0.43
08_02_0545 + 18470313-18470669,18470901-18471095,18471183-184713... 32 1.3
02_01_0381 - 2764331-2764342,2768966-2769907 32 1.3
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 1.7
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 2.3
04_03_0212 + 12697854-12698549,12698655-12698930,12698991-126990... 27 2.8
05_03_0032 - 7582595-7582690,7582879-7583004,7583119-7583185,758... 31 3.0
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 30 5.3
04_04_0462 + 25393733-25394347 29 7.0
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 29 7.0
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 7.0
>04_04_1098 + 30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 35.9 bits (79), Expect = 0.081
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Frame = +1
Query: 7 EAQPSSSXHNXKCKVIKSSLKGSNKSFLF---QESDSPARTGPRKRSYTQNDAEYASAKR 177
E++ S + K K + S S+K +E +S RKR T +D++ + +R
Sbjct: 514 ESETDSETYVKKKKNLPKSYHHSDKPAQRGKEKEENSGKNVDKRKRHDTDSDSDSHARER 573
Query: 178 KR-LTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNFAAL 354
KR L L+ ++ ++S +++ S+ ++ S E S D + S +L + L
Sbjct: 574 KRHLDARASLAAQKKRSVTSSSESSESSDYSSSSDSESDVSSDSREDRKSARQLKH-DEL 632
Query: 355 HQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPL-KESQKDIQKPPRESTKK 528
+K+ ++ E E +++K + R+ L L K+ Q++ ++ E K+
Sbjct: 633 ERKKRSQDEKRKELEKQKQEEERKELDRQKQREEERKAKELEKQKQREEERKALEKQKQ 691
>01_05_0474 -
22552599-22552687,22553494-22553631,22553766-22554447,
22555120-22555167,22555395-22556042,22556960-22557310,
22558622-22558690
Length = 674
Score = 33.5 bits (73), Expect = 0.43
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 13/122 (10%)
Frame = +1
Query: 19 SSSXHNXKCKVIKSSL-----KGSNKSFLFQESDSPARTG--------PRKRSYTQNDAE 159
SSS + K V+K S+ K S K F P R +K N E
Sbjct: 178 SSSRRSQKNTVVKLSMRMVSHKDSQKIFCQDSQGIPPRIRVPDLSCKKTQKEELNSNCCE 237
Query: 160 YASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLP 339
+ KRKR TE+ S +R S S + K ES TP+ K S K S P
Sbjct: 238 KLARKRKRGTEERMSSSKRQSHKDPKSLSLKCQES-TPTNKPRNTSHKKGENNSSSMPQP 296
Query: 340 NF 345
F
Sbjct: 297 KF 298
>08_02_0545 +
18470313-18470669,18470901-18471095,18471183-18471362,
18471462-18471656,18472081-18472179,18472271-18472780,
18472896-18473225
Length = 621
Score = 31.9 bits (69), Expect = 1.3
Identities = 31/132 (23%), Positives = 48/132 (36%)
Frame = +1
Query: 109 PARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEF 288
PA P A+ A A R +T ++ + + + A L P +
Sbjct: 396 PAEQEPAPLKKPAKQAKEAPAPRADVTPKDEIRAK--APAKAAKAKQPLDIDDIPDVHDD 453
Query: 289 TPSKDKTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXK 468
P K+KT KV KL K+ ++E ERK K+A + +
Sbjct: 454 EPPKEKTKPKVDEAKLKEM-----KRQEEIEKNKLALERKKKQAEKQAMKAAARAEKEAE 508
Query: 469 NPLKESQKDIQK 504
LKE +K +K
Sbjct: 509 KKLKEKEKKARK 520
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +1
Query: 100 SDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSK 279
+ SPA N EY ++R E +L RLS+P S++A + S P
Sbjct: 6 ASSPATAAAANSDDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPP 65
Query: 280 KEFTPSKDKTGG 315
P++ GG
Sbjct: 66 PPPPPNQPSAGG 77
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/136 (20%), Positives = 49/136 (36%)
Frame = +1
Query: 124 PRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKD 303
P + + D E A + E + ++ + + K + +KKE + +
Sbjct: 351 PPAAAMVKEDTETAEDGKAGEGEVESAAAKKKKKKKEKEKEKKAAAKEADAKKEEEKAVE 410
Query: 304 KTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPLKE 483
GKV KLP Q+ A+ + E +ERK + + L + K
Sbjct: 411 APKGKVDMKKLPKHVREMQEALARRQ---EAEERKKREEEERLRKEEEERLKKEEEERKA 467
Query: 484 SQKDIQKPPRESTKKL 531
+ +K RE K L
Sbjct: 468 EEAKRRKKEREKEKLL 483
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.1 bits (67), Expect = 2.3
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Frame = +1
Query: 55 KSSLKGSNKSFLFQESDSPAR-TGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPR 231
+SS + S +SD PA+ T P KR T+ D + +K + + S E P
Sbjct: 280 ESSDSSDSDSESESDSDEPAKPTIPAKRPLTK-DTKKGQSKDESEDSSDESSEESGDEP- 337
Query: 232 TTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKA 411
K+ +STT + PS T ++S + + + ES DE ++K
Sbjct: 338 ---PQKKIKDSTTSGTTK--PSPKATKKEISSDDESD------EDDSSDESSDEDVKQKQ 386
Query: 412 KRARQLLSPVXXXXXXXXKNPLKESQKDIQKPPRESTKKL 531
+A+++ +PV ++ ++S + +P + KK+
Sbjct: 387 TQAKKVQAPVAQESSSSDESSEEDSDMESDEPAKTPQKKI 426
>04_03_0212 +
12697854-12698549,12698655-12698930,12698991-12699038,
12699659-12699715,12700965-12701163,12702267-12702373,
12702586-12702759,12702844-12703083,12703638-12703693,
12704499-12704622
Length = 658
Score = 27.5 bits (58), Expect(2) = 2.8
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3
Query: 462 GGGDGGGYWRQ 430
GGG GGG+WRQ
Sbjct: 61 GGGGGGGWWRQ 71
Score = 21.8 bits (44), Expect(2) = 2.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 456 GDGGGYWRQELPRSLRLTFLALVQG 382
GDG W Q L L L F+ L G
Sbjct: 80 GDGWWRWLQSLHPELLLLFVLLHSG 104
>05_03_0032 -
7582595-7582690,7582879-7583004,7583119-7583185,
7583268-7583470
Length = 163
Score = 30.7 bits (66), Expect = 3.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 477 KWVLCGGGDGGGY 439
KWV CGG DGGG+
Sbjct: 71 KWVACGGDDGGGF 83
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 29.9 bits (64), Expect = 5.3
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +1
Query: 166 SAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNF 345
SA +R T +++ + L+ RT ++T S +T S + F P+ GG LP F
Sbjct: 8 SASGRRATGHRRIA-DYLADDRTEASTENGSFNTAYSDELFAPTSSSAGGDGVGGMLPAF 66
Query: 346 AALHQKQFAKMESLDE 393
A M LDE
Sbjct: 67 LADQSDLVEVMLELDE 82
>04_04_0462 + 25393733-25394347
Length = 204
Score = 29.5 bits (63), Expect = 7.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 513 SRWLLYILLTFFKWVLCGGGDGGGYWRQELPRSLRLTFLALVQGLHLSELLL 358
S + L+I L GGG GG R+E R+ + ++ GLH S LL
Sbjct: 28 SLFCLFIALVLQSTSTSGGGGDGGGVREECGRAAYSAAVTVLSGLHPSNDLL 79
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 29.5 bits (63), Expect = 7.0
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 43 CKVIKSSLKGSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAK--RKRLTEDMQLSVER 216
C L ++K F +++ SP+ GP S + + A + RK+ T+ S+++
Sbjct: 735 CDSCNKRLLSTDKLFEDEQNTSPSNVGPNSMSDMASATDMADIEQSRKQTTQHSSSSIDK 794
Query: 217 LSRPRTTSATAKLSESTTPSKK 282
+ + + A +S+T S++
Sbjct: 795 PTLHKHQKSIASNEQSSTISQR 816
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.5 bits (63), Expect = 7.0
Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 5/179 (2%)
Frame = +1
Query: 70 GSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATA 249
GS++S+ + D R+G R+ +++ Y+S+ R+ + + ++ SR + S
Sbjct: 568 GSDRSYR-DDRDKYGRSGRRESDRSRD--HYSSSSRRNRSRSISPRHKKSSRSDSRSPKR 624
Query: 250 KLSESTTPSK-KEFTPSKDKTGGKVSXTKLPNFAALH-QKQFAKMESLDECQERKAKRAR 423
ES +PSK + + ++ G+ +KL H ++ + S + + R + +
Sbjct: 625 HREESLSPSKSRRSARAGSRSPGQHKGSKLSPTRDHHSSRRSRRSRSRSQEKNRNSDKKD 684
Query: 424 QLLSPVXXXXXXXXKNPLKESQKDIQKPPRESTKKLDFGM---KPSTLPSQAERLHXVS 591
S + + + + K P E KKLD K S+ S+ E L+ S
Sbjct: 685 SKKSEMEDKKRRSDRGNRGDKDEKYLKDPMED-KKLDVSSVAHKRSSSASEDEMLNSNS 742
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,816,832
Number of Sequences: 37544
Number of extensions: 376714
Number of successful extensions: 1556
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4687251632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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