Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_B04_e122_04.seq
(1469 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 33 0.44
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 33 0.44
SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4) 33 0.58
SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.76
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 33 0.76
SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.76
SB_55836| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.0
SB_38480| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 31 3.1
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 30 4.1
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 30 4.1
SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6) 30 4.1
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 30 5.4
SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_771| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.27) 30 5.4
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 7.1
SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0) 29 7.1
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 29 7.1
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 29 7.1
SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095) 29 7.1
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 29 7.1
SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) 29 9.4
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 33.5 bits (73), Expect = 0.44
Identities = 31/124 (25%), Positives = 51/124 (41%)
Frame = +1
Query: 133 RSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTG 312
RS T A A+ + E +++ E + + R T+ LSES KKE + K +
Sbjct: 693 RSVTATLASADKAEFGKKEESLKVKYEEMLK-RVTAEKITLSESVQALKKEISVLKCERR 751
Query: 313 GKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPLKESQK 492
T+ + Q + K+ D C ERK K + L V K +++
Sbjct: 752 ESRCKTRAELDKVIKQSELEKLTIKDSC-ERKQKDELKRLEQVFQDRLLKDKIRFEQTID 810
Query: 493 DIQK 504
D+Q+
Sbjct: 811 DMQR 814
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 33.5 bits (73), Expect = 0.44
Identities = 39/149 (26%), Positives = 60/149 (40%)
Frame = +1
Query: 130 KRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKT 309
K+ + A A RK+ T Q ++ +RPR S K S+ K+E +DK
Sbjct: 175 KQDQEKQAARKRQASRKKKTSKPQDQDKQAARPRQASRKKKTSKPQEKDKQE----QDKQ 230
Query: 310 GGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPLKESQ 489
++ P A+L K S + Q ++A R RQ K K+ Q
Sbjct: 231 DQDKQASR-PRQASLKTK-----TSKQQDQGKQAARPRQASRKTKTSKTKTSKPQEKDKQ 284
Query: 490 KDIQKPPRESTKKLDFGMKPSTLPSQAER 576
PR++++K KP +QAER
Sbjct: 285 ---AARPRQASRKTKTS-KPQEKDNQAER 309
>SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4)
Length = 488
Score = 33.1 bits (72), Expect = 0.58
Identities = 28/135 (20%), Positives = 49/135 (36%)
Frame = +1
Query: 130 KRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKT 309
K+ Q+ A RK T Q ++ +RPR S K S+ K+ P +
Sbjct: 260 KQQDKQDKQALRQASRKTKTSKPQDQDKQAARPRQASRKTKTSKPQDQDKQAARPRQASC 319
Query: 310 GGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPLKESQ 489
K S + + +Q + + Q+R + ARQ K + Q
Sbjct: 320 ETKTSKLQDQDKLDARPRQASCKTKTSKPQDRDKQAARQARQASHKTKTKTSKTSKPQDQ 379
Query: 490 KDIQKPPRESTKKLD 534
PR++++K +
Sbjct: 380 DKQAARPRQASRKTE 394
>SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 32.7 bits (71), Expect = 0.76
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +1
Query: 214 RLSRPRTTSATA--KLSESTT-PSKKEFTPSKDKTGGKVSXTKLPNFAALHQKQFAKMES 384
RL +P+ A+ KL+ + P+KK P K T K P A +K+ A ++
Sbjct: 100 RLVQPKGKGASGSFKLTAAAKKPAKKAVKPKKKATPKKKKPAAKPKKKATPKKKAAAKKT 159
Query: 385 LDECQERKAKRARQLLSPVXXXXXXXXKNPLKESQKDIQKPPRESTKK 528
+KAK ++ P + P K+S K KP +++ K
Sbjct: 160 KKAKSPKKAKSPKKAKKPKKSPAKKAARKPAKKSAK---KPAKKAGAK 204
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 32.7 bits (71), Expect = 0.76
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 9/151 (5%)
Frame = +1
Query: 151 DAEYASAKRKRLTEDMQLSVERLSRPRTT---------SATAKLSESTTPSKKEFTPSKD 303
D + A+ R+ + + + +RPR S T+K S+ K+E +D
Sbjct: 1100 DQDQAARPRRASLKTSKAQDKHAARPRQARQASRKTKTSKTSKTSKPQDQDKQEKRDKQD 1159
Query: 304 KTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPLKE 483
K G +K + + K + D Q+++A R RQ S +N
Sbjct: 1160 KQGASCKTSKPEDQDKTAARPSCKTKQQD--QDKQAARPRQASSKTKTSKTSKPQNKQAA 1217
Query: 484 SQKDIQKPPRESTKKLDFGMKPSTLPSQAER 576
K ++ R++ K D K + P QA R
Sbjct: 1218 RPKQARQASRKTNKPQDQD-KQAARPRQASR 1247
>SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 32.7 bits (71), Expect = 0.76
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 100 SDSPARTG-PRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPS 276
S S TG P++R T +D+EY K ED +P+ AT+ +S PS
Sbjct: 493 SPSKQDTGKPQEREATSDDSEYQLPKLSPSKEDT-------GKPQEWEATS--DDSECPS 543
Query: 277 KKEFTPSKDKTGGKVSXTKLPNFAALHQ 360
KK+ ++ GKV + LHQ
Sbjct: 544 KKDTGKIQESPSGKVPQEHEEDIETLHQ 571
>SB_55836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 32.3 bits (70), Expect = 1.0
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 5/181 (2%)
Frame = +1
Query: 40 KCKVIKSSLKGSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERL 219
K +++ S + N +F+ + P ++ P++ T+N +S K Q+ +
Sbjct: 69 KSEIVPSPSEAMNATFIKNSPEVP-KSSPKQ---TKNSDSPSSLKENDTYYKAQVMQQLE 124
Query: 220 SRPRTT--SATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNFAALHQKQFAKMESLDE 393
++ + T S T + S P K K GK +++++H + F KM+S+D
Sbjct: 125 NKVQETLKSTTFQFQASRIPRFKMQQDEKKTPKGK-------DWSSVHGQLFKKMDSIDV 177
Query: 394 CQERKAKRARQLLSPV--XXXXXXXXKNPLKESQKDIQKPPRESTKKLDFGM-KPSTLPS 564
E+K KR + V K+ + E +K P ++ K L + K T+ S
Sbjct: 178 YLEKKRKRTQSFYQNVKKAKMTLDAAKSSVAEMKK-AHHTPSKTRKSLGKPVSKTVTIAS 236
Query: 565 Q 567
Q
Sbjct: 237 Q 237
>SB_38480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +1
Query: 79 KSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLS 222
K LF S RT PRKR+Y YA KR L E + +V LS
Sbjct: 15 KQLLFTLYLSDPRTMPRKRNYNFPIGTYAKKKRAILEELFEENVNALS 62
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/114 (21%), Positives = 48/114 (42%)
Frame = +1
Query: 94 QESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTP 273
+E+ SP++ + R T +K +D+Q E+ + + + L +
Sbjct: 269 RENLSPSKIHKKDREKTPTKKNKEKNVKKNEEKDVQKEEEKDVQKKVEKSAKHLPQKKPE 328
Query: 274 SKKEFTPSKDKTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLS 435
SKK KD G K+ ++Q + E ++E ++ K K+ ++LS
Sbjct: 329 SKKHEQTKKDLKGRKL------------KRQLSDKEKIEEIKKEKLKKVEEILS 370
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +1
Query: 124 PRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKD 303
P++ T +D+EY K ED +P+ AT+ +S PSKKE +++
Sbjct: 722 PQEWEATSDDSEYQLPKLSPSKEDT-------GKPQEWEATS--DDSECPSKKETGKTQE 772
Query: 304 KTGGKVSXTKLPNFAALHQ 360
GKV + LHQ
Sbjct: 773 SPSGKVPQEHEEDIETLHQ 791
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 3.1
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +1
Query: 94 QESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTP 273
++ SP T P++ S + + +S+K+ + S P+TT++ ++ ST+P
Sbjct: 655 KQQTSPKVTSPQQTSTSPQETSTSSSKQTSTQQTSSSQQTSTSPPQTTTSPSQ-QTSTSP 713
Query: 274 SKKEFTPSKDKT 309
+ +PS+ T
Sbjct: 714 PQTTTSPSQQTT 725
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 30.3 bits (65), Expect = 4.1
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Frame = +1
Query: 277 KKEFTPSKDKTGGKVSXTKLPN--FAALHQKQFAKMESLDECQERKAKRARQLLSPVXXX 450
KKE + GK+ K P+ F+ QK+ ++ ECQ R++ R R S +
Sbjct: 429 KKEQFDEEVLDKGKIKEDKKPDKRFSRKGQKRERSVDYQSECQ-RRSTRTRTPSSKIEPE 487
Query: 451 XXXXXKNPLKESQK-----DIQKPPRESTKKLDFGMKPSTLPSQAERL 579
K +++K D+ R++ K P TLPS+ RL
Sbjct: 488 GKVEKKTETSKTKKRKTMDDLTDDVRKTDKTDGETKTPKTLPSEDSRL 535
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 30.3 bits (65), Expect = 4.1
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +1
Query: 130 KRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKT 309
K++ A A RK+ T Q ++ +RPR S + S+ K+ P +
Sbjct: 301 KQAARPRQARTRQASRKKKTRKPQEQAKQAARPRQASRKTRTSKPQDKDKQAARPGQASR 360
Query: 310 GGKVSXTKLPNFAALHQKQFAK--MESLDECQERKAKRARQ 426
K S + + A +Q + S + Q+++A RQ
Sbjct: 361 KTKTSKPQDQDKQAARPRQAGRKTKTSKPQAQDKQAASPRQ 401
>SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6)
Length = 325
Score = 30.3 bits (65), Expect = 4.1
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 220 SRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTK 333
+RP+T++ TAK++ +T + + T +K+ T K S T+
Sbjct: 186 NRPQTSTITAKITTESTTATQATTKTKEYTTNKPSTTE 223
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 29.9 bits (64), Expect = 5.4
Identities = 24/112 (21%), Positives = 52/112 (46%)
Frame = +1
Query: 4 HEAQPSSSXHNXKCKVIKSSLKGSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKR 183
H ++ SS + K + S + ++S S S +++ R + Y+++ + S++R+R
Sbjct: 277 HRSRSSSLSSRRRSKHKRKSKRDRSRSR--DRSSSKSKSLRRSKKYSRSRSR--SSERRR 332
Query: 184 LTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLP 339
+ SR R+ + S ST+PS++ + K S +++P
Sbjct: 333 RSRSRSTEHRYRSRSRSPRRKHRRSTSTSPSRRYRSGKKGHKRRSRSASRVP 384
>SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 29.9 bits (64), Expect = 5.4
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 97 ESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTP 273
++ P R PR R+ SA+RK LT D+Q S+ T K+S T P
Sbjct: 517 DTSLPPRVRPRSRTADNRSTSDMSAQRKLLTADLQKSLR-----TKFGETPKISSETRP 570
>SB_771| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.27)
Length = 506
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +1
Query: 250 KLSE--STTPSKKEFTPSKDKTGGKVS-XTKLPNFAALHQKQFAKMESLDECQ--ERKAK 414
KL E S PS ++FT ++D GG S T L ++Q AK E+ D C+ E AK
Sbjct: 405 KLEEPISEPPSPRQFTEAEDTVGGIASHITSLREEIRRLRQQLAKSEA-DYCEKMEAYAK 463
Query: 415 RARQ 426
RQ
Sbjct: 464 EERQ 467
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 29.5 bits (63), Expect = 7.1
Identities = 26/137 (18%), Positives = 56/137 (40%)
Frame = +1
Query: 118 TGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPS 297
T P++RS ++ + Y+S R + S S+ T S+ + S+ + + + S
Sbjct: 184 TSPKRRSPRRSSSSYSSRSRSSSSSSSGSSHSSRSQSHTPSSGSGSRNSSRSASRSQSHS 243
Query: 298 KDKTGGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXKNPL 477
++ K S ++ + + H ++ S + R R+R ++P
Sbjct: 244 VSRSRSK-SLSQSRSRSQSHSA--SRSVSRSRSRSRSGSRSRTRSHSPSDHSSVGSRSPS 300
Query: 478 KESQKDIQKPPRESTKK 528
K+ Q + +E +KK
Sbjct: 301 KQPQTPPHESGKEESKK 317
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 29.5 bits (63), Expect = 7.1
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Frame = +1
Query: 211 ERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNFAALHQ--KQFAKMES 384
++ +RPR S K S+ K+ K T K+S + P A+ Q KQ ++
Sbjct: 109 KQAARPRQASRKKKTSKPQDQDKQSTDQDKQATSPKISKQQAPRQASNKQQDKQATSPKT 168
Query: 385 LDECQERKAKRARQLLSPVXXXXXXXXKNPLKESQKDIQKPPRESTKK 528
+ R+A R Q + P K S+K P+ T K
Sbjct: 169 SKQQAPRQASRKPQ-DKQAASPKTSKPQAPGKASRKTKTSNPQTKTSK 215
>SB_18984| Best HMM Match : DNA_topoisoIV (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 55 KSSLKGSNKSFLFQESDSP-ARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPR 231
KSS K K+ + +DS A+ G +K + + A+ +A + D SVE +S+ +
Sbjct: 1116 KSSPKKKGKAPSSKSADSDEAQPGKKKAAPRKRPAKGVTAASRDGDSDSDASVEVVSKKK 1175
Query: 232 TTSATAK 252
TT A K
Sbjct: 1176 TTKAVKK 1182
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 29.5 bits (63), Expect = 7.1
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 7/170 (4%)
Frame = +1
Query: 4 HEAQPSSSXHNXKCKVIKSSLKGSNKSFLFQES--DSPARTGPRKRSYTQNDAEYASAKR 177
H PS S H+ K K + +K N + +E + RK S +++ A
Sbjct: 155 HRETPSCS-HDEKIKAAEQKIKILNNNLEEKEKVYEKVLEELKRKESVMESELLRQKASL 213
Query: 178 KRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTPSKDKTGGKVS---XTKLP-NF 345
+ ED++ S++ L LSE K+ K K K+ KL
Sbjct: 214 ENEKEDLERSLKELLEKSPKEKEEMLSEELETQKELLIKEKHKVEEKLQNELNQKLELKD 273
Query: 346 AALHQKQFAKMESLDECQERKAKRARQLLSPVXXXXXXXXK-NPLKESQK 492
L +K A+ L++ K + ++L + K L+E++K
Sbjct: 274 KELEEKLLAQKADLEKVIAEKEAQQKELQQELSIHKSATEKLKDLEENEK 323
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 462 GGGDGGGYWRQELPRSLRLTFLAL 391
GGG GGG WR E PR L +AL
Sbjct: 3235 GGGGGGGMWR-EFPRVRTLIVIAL 3257
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 29.5 bits (63), Expect = 7.1
Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 3/148 (2%)
Frame = +1
Query: 94 QESDSPA-RTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTT 270
Q S P + R R ++ ++ + +D Q + +R +R S AK S+
Sbjct: 239 QASRKPQDKQAARPRQASRKTKTNKPQEKDKQEQDKQAARKRQARSSQASRKAKPSKPQG 298
Query: 271 PSKKEFTPSKDKT--GGKVSXTKLPNFAALHQKQFAKMESLDECQERKAKRARQLLSPVX 444
+K+ PS+DK+ K + K + + K + D+ R + +R+ +
Sbjct: 299 QAKQAARPSQDKSQDQDKQAARKRQARTSQASPKTNKQQDQDKQAARPRQASRKTKTSKP 358
Query: 445 XXXXXXXKNPLKESQKDIQKPPRESTKK 528
P + S K + P+E K+
Sbjct: 359 QDQDKQATRPRQASHKTKPRKPKEKDKQ 386
>SB_16800| Best HMM Match : DUF1662 (HMM E-Value=0.095)
Length = 142
Score = 29.5 bits (63), Expect = 7.1
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 55 KSSLKGSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRT 234
+ L GS+K+F QE +SP T R+R ASA KR+ +M S+ +L +P
Sbjct: 53 QGQLLGSSKTFK-QEYESPI-TRARERD--------ASAYEKRIGGEMAESLRKLIQPHF 102
Query: 235 TSATAKLSESTTPSKKEFT--PSKDKTGGKVSXTKLP 339
T + T ++E T +++ G S K+P
Sbjct: 103 LRRTKAMVLKNTKKEEEGTIKEREEQIDGSQSIPKMP 139
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 29.5 bits (63), Expect = 7.1
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 58 SSLKGSNKSFLFQESDSPARTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTT 237
+S K SNK+ SDS + +K T +DA K+ +LT L+ L P
Sbjct: 321 NSYKNSNKNSYISTSDSYPKN--QKEKKTWSDA--LRLKQSKLTRAHTLAGMVLGTPGHE 376
Query: 238 SATAKL---SESTTPSKKEFTPSKDKTG 312
SA +K S+ + PS P DK G
Sbjct: 377 SAKSKAGPQSKRSIPSYSHLLPLFDKEG 404
>SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082)
Length = 363
Score = 29.1 bits (62), Expect = 9.4
Identities = 24/92 (26%), Positives = 37/92 (40%)
Frame = +1
Query: 229 RTTSATAKLSESTTPSKKEFTPSKDKTGGKVSXTKLPNFAALHQKQFAKMESLDECQERK 408
R T+ LSES KKE + K + T+ + Q + K+ D C ERK
Sbjct: 4 RVTAEKITLSESVQALKKEISVLKCERRESRCKTRAELDKVIKQSELEKLTIKDSC-ERK 62
Query: 409 AKRARQLLSPVXXXXXXXXKNPLKESQKDIQK 504
K + L V K +++ D+Q+
Sbjct: 63 QKDELKRLEQVFQDRLLKDKIRFEQTIDDMQR 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,249,982
Number of Sequences: 59808
Number of extensions: 402027
Number of successful extensions: 1368
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4742061908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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