Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_B04_e122_04.seq
         (1469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   5.5  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   9.7  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 5.5
 Identities = 15/65 (23%), Positives = 27/65 (41%)
 Frame = +1

Query: 115 RTGPRKRSYTQNDAEYASAKRKRLTEDMQLSVERLSRPRTTSATAKLSESTTPSKKEFTP 294
           R   R+ ++   +  Y SAK+     + +L+  +       S    L  + TP K +F  
Sbjct: 742 RNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTARALCANKTPDKPDFPY 801

Query: 295 SKDKT 309
            K+ T
Sbjct: 802 RKEFT 806


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 24.2 bits (50), Expect = 9.7
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 356 TRSSSLRWSPWTSARNVRRSERGNSCLQXXXXXXXXQRTH 475
           T S+ L W+ +  A N    E+G  C+Q        + T+
Sbjct: 307 TSSTLLTWTLYELALNPEVQEKGRQCVQEVLAKHNGEMTY 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,935
Number of Sequences: 2352
Number of extensions: 13273
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 171498690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)