BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_B03_e114_03.seq (1559 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 24 2.6 AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 8.1 >EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase protein. Length = 475 Score = 24.2 bits (50), Expect = 2.6 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 Query: 69 RXAKLAFVIRIRGVNQVSPKVRKVLQL 149 R KL FV+R+ G+ + +RK ++L Sbjct: 356 RALKLWFVLRLYGIENLQAFIRKHVEL 382 >AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor (isoform A) protein. Length = 549 Score = 22.6 bits (46), Expect = 8.1 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 Query: 621 VPNSPYSESXYNVTG 665 V N PYS YN+ G Sbjct: 417 VNNQPYSRDSYNLAG 431 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 205,718 Number of Sequences: 336 Number of extensions: 3492 Number of successful extensions: 17 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 122,585 effective HSP length: 60 effective length of database: 102,425 effective search space used: 47013075 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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