Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_B01_e098_03.seq
(1423 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 109 3e-23
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 79 3e-14
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 77 2e-13
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 77 2e-13
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 77 2e-13
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 77 2e-13
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 77 2e-13
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 77 2e-13
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 31 7.7
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 31 7.7
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 31 7.7
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 31 7.7
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 31 7.7
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 31 7.7
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 31 7.7
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 109 bits (261), Expect = 3e-23
Identities = 51/109 (46%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+ +L H DNAP+H+S A + E R++++ H PYSPDLAPSDFFLFP+LK SL G FS
Sbjct: 247 QRVLLHHDNAPAHSSHQTRAILREFRWEIIRHPPYSPDLAPSDFFLFPNLKKSLKGTHFS 306
Query: 503 T----NKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDYVKK 369
+ K A+T++N+ ++ +++ DGL W H +KC+EL G YV+K
Sbjct: 307 SVNNVKKTALTWLNS----QDPQFFRDGLNGWYHRLQKCLELDGAYVEK 351
Score = 49.2 bits (112), Expect = 4e-05
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -2
Query: 843 FSAGKVMVXVFCDSHGVILIXYIQKGKXITGAYYASLFDNLKAEFAEKRP-RLQKR 679
+S KVM VF D+ G++L+ +++ + IT AYY S+ L AEKRP +L +R
Sbjct: 193 WSRAKVMATVFWDAQGILLVDFLEGQRTITSAYYESVLRKLAKALAEKRPGKLHQR 248
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL+P+D+ F HL L G+RF
Sbjct: 240 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLSPTDYHFFKHLDNFLQGKRF 298
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 299 HNQQDAENAFQEFVESRSTDFYATGINKLISRWQKCVDCNGSY 341
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 568 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 626
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 627 HNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 241 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 299
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 300 HNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 342
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 326 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 384
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 385 HNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 427
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 568 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 626
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 627 HNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 568 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 626
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 627 HNQQDAENAFQEFVESQSTDFYATGINQLISRWQKCVDCNGSY 669
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 76.6 bits (180), Expect = 2e-13
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 686 KKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRF 507
K IL H DNA H + + K++EL +++L H PYSPDL P+++ +F HL L G+RF
Sbjct: 568 KGPILLH-DNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRF 626
Query: 506 STNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDY 378
++A + ++ ++Y G+ + +KC++ G Y
Sbjct: 627 HNQQDAENAFQEFVESQSTDFYATGINQLIFRWQKCVDCNGSY 669
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 8 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 62
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 54 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 108
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 573 RSSPKRLLFVPSSKNFARRTEIFDK*RGNHLRE*LFCSEKRRVLFGRVTEMGASP 409
R +P + F +RTE+F G H + ++C +K ++ G V +G P
Sbjct: 50 RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMP 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,802,287
Number of Sequences: 237096
Number of extensions: 2683085
Number of successful extensions: 4119
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4119
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20827470920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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