Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_B01_e098_03.seq
(1423 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 84 3e-16
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 64 3e-10
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 60 5e-09
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 58 1e-08
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 40 0.004
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 40 0.004
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 40 0.004
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 40 0.004
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 38 0.017
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 38 0.017
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 38 0.023
U13071-3|AAA20673.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.030
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 32 0.86
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 32 0.86
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 32 0.86
AF022972-6|AAM29670.1| 370|Caenorhabditis elegans Hypothetical ... 30 3.5
AF022972-5|AAC48237.1| 523|Caenorhabditis elegans Udp-glucurono... 30 3.5
AF016670-4|AAB66105.2| 232|Caenorhabditis elegans Hypothetical ... 29 8.0
AF016670-3|AAB66106.1| 232|Caenorhabditis elegans Hypothetical ... 29 8.0
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 83.8 bits (198), Expect = 3e-16
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
K +L H DNA HT+ K+ L ++L H PYSPDLAP+D+ LF L+ L GQ+F
Sbjct: 208 KLLLLH-DNARPHTALKTRQKLQTLGIEVLPHPPYSPDLAPTDYHLFRSLQNHLAGQKFH 266
Query: 503 TNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDYV 375
K T+++++FA K+ E+Y +G+ + ++ I+ G+Y+
Sbjct: 267 DRKAVETWLDDFFASKSQEFYAEGIAQLPLRWQEVIDTNGEYI 309
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 63.7 bits (148), Expect = 3e-10
Identities = 27/103 (26%), Positives = 57/103 (55%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+++ F DNA H + K+ +L + +L H PYSPDLAP+D+ LF L + ++F
Sbjct: 235 EKLYFLHDNARPHVAKKTFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFD 294
Query: 503 TNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQGDYV 375
+ T ++ +F+ ++ +++ G+ ++ ++ G+Y+
Sbjct: 295 DEEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNGEYL 337
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/100 (26%), Positives = 54/100 (54%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+++ F DNA H + K+ +L + +L H PYSPDLAP+D+ LF L + ++F
Sbjct: 210 EKLYFLHDNARPHVAKKTFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFD 269
Query: 503 TNKEAITFVNNYFAVKNAEYYLDGLQRWEHHREKCIELQG 384
+ T ++ +F+ ++ +++ G+ ++ ++ G
Sbjct: 270 DEEHLKTELSTFFSSRSPDFFSRGIMMLPSKWQQVVDTNG 309
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 58.4 bits (135), Expect = 1e-08
Identities = 25/85 (29%), Positives = 49/85 (57%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+++ F DNA H + K+ +L + +L H PYSPDLAP+D+ LF L + ++F
Sbjct: 235 EKLYFLHDNARPHVAKKTFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFD 294
Query: 503 TNKEAITFVNNYFAVKNAEYYLDGL 429
+ T ++ +F+ ++ +++ G+
Sbjct: 295 DEEHLKTELSTFFSSRSPDFFSRGI 319
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + R LLD SPDL P + L+ L+ LGG R S
Sbjct: 214 VFQQDNDPKHTSLHVRSWFQRRRVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 269
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + R LLD SPDL P + L+ L+ LGG R S
Sbjct: 243 VFQQDNDPKHTSLHVRSWFQRRRVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 298
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + R LLD SPDL P + L+ L+ LGG R S
Sbjct: 173 VFQQDNDPKHTSLHVRSWFQRRRVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 228
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 39.9 bits (89), Expect = 0.004
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + R LLD SPDL P + L+ L+ LGG R S
Sbjct: 173 VFQQDNDPKHTSLHVRSWFQRRRVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 228
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 37.9 bits (84), Expect = 0.017
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + LLD SPDL P + L+ L+ LGG R S
Sbjct: 173 VFQQDNDPKHTSLHVRSWFQRRHVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 228
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 37.9 bits (84), Expect = 0.017
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + LLD SPDL P + L+ L+ LGG R S
Sbjct: 243 VFQQDNDPKHTSLHVRSWFQRRHVHLLDWPSQSPDLNPIE-HLWEELERRLGGIRAS 298
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 37.5 bits (83), Expect = 0.023
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = -3
Query: 674 LFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
+F QDN P HTS + LLD SPDL P + L+ L+ LGG R S
Sbjct: 243 VFQQDNDPKHTSLHVRSWFQRRHVHLLDWPSQSPDLNPIE-HLWEKLERRLGGIRAS 298
>U13071-3|AAA20673.1| 286|Caenorhabditis elegans Hypothetical
protein T22F7.4 protein.
Length = 286
Score = 37.1 bits (82), Expect = 0.030
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = -3
Query: 683 KEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAPSDFFLFPHLKISLGGQRFS 504
K++ F Q+NA + + ++ + +L + PYS APS+++ F + LGG+ F+
Sbjct: 3 KQLHFQQNNACPYGLKQVLQELARRGWMVLLYPPYSQGTAPSEYWSFSDVARVLGGRTFN 62
Query: 503 TN 498
T+
Sbjct: 63 TH 64
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 32.3 bits (70), Expect = 0.86
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 695 HVCKKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAP 561
H +K+ F QDNA H S + LLD SPDL P
Sbjct: 220 HYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNP 264
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 32.3 bits (70), Expect = 0.86
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 695 HVCKKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAP 561
H +K+ F QDNA H S + LLD SPDL P
Sbjct: 220 HYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNP 264
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.86
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 695 HVCKKEILFHQDNAPSHTSAVAMAKIHELRFQLLDHSPYSPDLAP 561
H +K+ F QDNA H S + LLD SPDL P
Sbjct: 350 HYSRKDFRFQQDNATIHVSNSTRDYFKLKKINLLDWPARSPDLNP 394
>AF022972-6|AAM29670.1| 370|Caenorhabditis elegans Hypothetical
protein F10D2.12 protein.
Length = 370
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 765 KXITGAYYASLFDNLKAEFAEKRPRLQKRNPVSPRQRTVSH 643
K I A+ A LFD+ AE A+K + P+ P + V H
Sbjct: 267 KKIIEAFQAILFDSSYAENAQKLAEQLENQPIKPEKMMVKH 307
>AF022972-5|AAC48237.1| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein38 protein.
Length = 523
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 771 KGKXITGAYYASLFDNLKAEFAEKRPRLQKRNPVSPRQRTVSH 643
K + I A+ A LFD+ A+ A+K + P+ P++ V H
Sbjct: 418 KSEKIIEAFQAILFDSSYAKNAQKLAEQLENQPIKPKEMMVKH 460
>AF016670-4|AAB66105.2| 232|Caenorhabditis elegans Hypothetical
protein K02F6.5 protein.
Length = 232
Score = 29.1 bits (62), Expect = 8.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -3
Query: 536 LKISLGGQRFSTNKEAITFVNNYF 465
+++ +GG++FSTN+ +T + YF
Sbjct: 2 IRLDVGGRKFSTNRSTLTKFDGYF 25
>AF016670-3|AAB66106.1| 232|Caenorhabditis elegans Hypothetical
protein K02F6.8 protein.
Length = 232
Score = 29.1 bits (62), Expect = 8.0
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = -3
Query: 536 LKISLGGQRFSTNKEAITFVNNYF 465
+++ +GG++FSTN+ +T + YF
Sbjct: 2 IRLDVGGRKFSTNRSTLTKFDGYF 25
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,720,891
Number of Sequences: 27780
Number of extensions: 431803
Number of successful extensions: 931
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4048197742
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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