Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A10_e169_02.seq
(1499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 262 2e-68
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 255 2e-66
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 199 2e-49
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 159 2e-37
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 152 2e-35
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 142 2e-32
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 139 2e-31
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 128 4e-28
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 116 2e-24
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 113 9e-24
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 112 3e-23
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 101 4e-20
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 87 9e-16
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 65 4e-09
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 65 4e-09
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 61 6e-08
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 61 8e-08
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 60 1e-07
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 58 5e-07
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 56 2e-06
UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellula... 56 2e-06
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 54 7e-06
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 54 1e-05
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 54 1e-05
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 53 2e-05
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 53 2e-05
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 53 2e-05
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 53 2e-05
UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial... 52 4e-05
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 51 7e-05
UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9; Bacteria... 51 9e-05
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 51 9e-05
UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - ... 50 2e-04
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 50 2e-04
UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32; Bacteri... 49 3e-04
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 48 5e-04
UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29; Proteob... 47 0.001
UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellula... 47 0.001
UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial... 46 0.002
UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep:... 46 0.003
UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellula... 45 0.004
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 45 0.004
UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular... 45 0.004
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.010
UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20; Bacteri... 44 0.014
UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex ... 43 0.018
UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondr... 43 0.024
UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;... 42 0.032
UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial... 42 0.032
UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachi... 41 0.073
UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep... 41 0.073
UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.073
UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellula... 40 0.13
UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, wh... 40 0.17
UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial... 40 0.17
UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:... 40 0.22
UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1; Fusobact... 39 0.29
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 39 0.29
UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5... 39 0.39
UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.52
UniRef50_A7NSS9 Cluster: Chromosome chr18 scaffold_1, whole geno... 38 0.68
UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n... 38 0.68
UniRef50_Q4N5E3 Cluster: 40S ribosomal protein S9, putative; n=2... 37 1.2
UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1; Ba... 37 1.2
UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1; To... 37 1.6
UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5... 36 2.1
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 36 3.6
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 36 3.6
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 36 3.6
UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FA... 36 3.6
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 36 3.6
UniRef50_A6DHM5 Cluster: Putative uncharacterized protein; n=1; ... 34 8.4
UniRef50_A0UPY8 Cluster: Putative uncharacterized protein precur... 34 8.4
UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein DKFZp4... 34 8.4
UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n... 34 8.4
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 262 bits (642), Expect = 2e-68
Identities = 118/141 (83%), Positives = 137/141 (97%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 255 bits (625), Expect = 2e-66
Identities = 118/145 (81%), Positives = 135/145 (93%)
Frame = +1
Query: 106 ARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKE 285
A +E IQ+VQV GRKKTATAVAYCKRG+G+L+VNGRPL+ +EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 286 KFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLV 465
+F+GVDIR+ VKGGG+VAQ+YAIRQAISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLV
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLV 123
Query: 466 ADPRRCEPKKFGGPGARARYQKSYR 540
ADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 124 ADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 199 bits (485), Expect = 2e-49
Identities = 89/140 (63%), Positives = 116/140 (82%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 300
+ +VQ FG+KK+ATAVA+ K G G+++VNG P+ LVEP +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 301 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 480
DIRV V GGGHV+QVYAIRQAI+K L+A++QKYVDE SK E+K YDR+LL+AD RR
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRR 123
Query: 481 CEPKKFGGPGARARYQKSYR 540
EPKKFGG GAR+R+QKSYR
Sbjct: 124 PEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 159 bits (385), Expect = 2e-37
Identities = 76/146 (52%), Positives = 102/146 (69%)
Frame = +1
Query: 103 EARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGK 282
E R V G+KK + AVA+ K G G + VN PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 283 EKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLL 462
F G+D+ + V GGGHV+Q+YA+RQAIS+ ++A + DEA++ E++ LV YDR L+
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISRGVLASVK---DEAARSELRAKLVSYDRQLV 132
Query: 463 VADPRRCEPKKFGGPGARARYQKSYR 540
V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 133 VSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 152 bits (369), Expect = 2e-35
Identities = 69/94 (73%), Positives = 82/94 (87%)
Frame = +1
Query: 259 EPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDIL 438
EP+L++G +KF+GVDIRV V GGGH +QVYAIRQAI+K+L+A+YQKYVDE SK ++K
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQAIAKSLVAYYQKYVDEHSKNQLKQAF 121
Query: 439 VQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 540
VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 122 VQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 142 bits (345), Expect = 2e-32
Identities = 72/141 (51%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVA-YCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
++ VQ FG+KKTA AVA K ++VNG PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
+ I V V GGG V+Q YA RQAI+K LIAF+QKY +E K +KD + YD+ LL+ADPR
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLLIADPR 128
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCEPKK+G AR R+ KSYR
Sbjct: 129 RCEPKKWGRHSARTRFTKSYR 149
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 139 bits (336), Expect = 2e-31
Identities = 62/137 (45%), Positives = 93/137 (67%)
Frame = +1
Query: 130 VQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIR 309
+Q FG+KK A A+ K+G G +++NG P++LV P ++ K+ EP +LG + ++
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 310 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 489
+ KGGG V+Q+YAIRQ+ISK L+ +Y KY+ + +K + YD+ LL++D R EP
Sbjct: 63 IFSKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEP 122
Query: 490 KKFGGPGARARYQKSYR 540
KK+GG GARAR+QKSYR
Sbjct: 123 KKYGGLGARARFQKSYR 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 128 bits (309), Expect = 4e-28
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKR-GHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
+++V G+KK A A C + G +R+N P L+ L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
+ +T K GG V++VYA+R A +KA++AFY Y DE K+EI+ L+ +DR LVAD R
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSR 124
Query: 478 RCEPKKFGGPGARARYQKSYR 540
+ EPKKFGGPGARARYQKSYR
Sbjct: 125 KREPKKFGGPGARARYQKSYR 145
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 116 bits (279), Expect = 2e-24
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +1
Query: 292 SGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 471
S VDIR+ V GGG +Q+YAIRQAI+K+L+A+Y KY D AS E++ + V YDR+LL+AD
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIAD 176
Query: 472 PRRCEPKKFGGPGARARYQKSYR 540
RR EPKKFGG GARAR QKSYR
Sbjct: 177 TRRSEPKKFGGHGARARRQKSYR 199
Score = 79.0 bits (186), Expect = 3e-13
Identities = 31/56 (55%), Positives = 49/56 (87%)
Frame = +1
Query: 127 AVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFS 294
+V FG+KKTATAVA+CK G G++R+NG+P+ LV+P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 113 bits (273), Expect = 9e-24
Identities = 58/108 (53%), Positives = 76/108 (70%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 300
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ +G+
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 301 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 444
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 112 bits (269), Expect = 3e-23
Identities = 57/142 (40%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 300
++ +Q G++KTA A A + G G +R+NG+P++++EP + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 301 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 480
DI V V+GGG + Q A R AI++AL V+ +K+ ++YDR++LV DPRR
Sbjct: 61 DIDVKVQGGGFMGQAEAARIAIARAL-------VEWTGDMNLKEKFIKYDRTMLVGDPRR 113
Query: 481 CEPKK--FGGPGARARYQKSYR 540
EP K G RA+ QKSYR
Sbjct: 114 TEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 101 bits (243), Expect = 4e-20
Identities = 54/142 (38%), Positives = 90/142 (63%), Gaps = 9/142 (6%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
G++K A A A + G G + +NG PL++ + + K+ EP+L+ G+ S VDIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 322 GGGHVAQVYAIRQAISKALIAFYQ---------KYVDEASKKEIKDILVQYDRSLLVADP 474
GGG + Q A+R AI++ L+ F++ + +D+ S ++++ +++DR++LV DP
Sbjct: 71 GGGVMGQADAVRMAIARGLVEFFRCEESDDELCRMMDKIS-RDLRTAFLEHDRTMLVGDP 129
Query: 475 RRCEPKKFGGPGARARYQKSYR 540
RR EP+K+ AR R+QKSYR
Sbjct: 130 RRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 87.4 bits (207), Expect = 9e-16
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Frame = +1
Query: 139 FGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
F +K A+A Y +G G +R+N P +++ + + P+ + G + VDI V V
Sbjct: 10 FATRKAASAHVYIIKGTGRVRINNVPAEMIVHESAREAILAPLDIAGDAR-KKVDISVRV 68
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPR 477
KGGG + Q A IS+ALI + + + + ++++++ + +D+ L+ D R
Sbjct: 69 KGGGFMGQAGASATGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDAR 128
Query: 478 RCEPKKFGGPGARARYQKSYR 540
R EPKKFGGPGAR R QKSYR
Sbjct: 129 RKEPKKFGGPGARRRKQKSYR 149
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 65.3 bits (152), Expect = 4e-09
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNG-RPLDLVEPRLLQYKLQEPILLLGKEKFS 294
P+Q+ QVFG KK A +A +G +++V L++ EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 295 GVDIRVTVKGGGHVAQVYAI 354
V I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 65.3 bits (152), Expect = 4e-09
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Frame = +1
Query: 130 VQVFGRKKTATAVAYCKRGHGVLRVNGRPL-DLVEPRLLQYKLQEPILL-LGKEKFSGVD 303
+ GR+KTA A Y K G G+++VN P + LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 304 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 483
+ V GGG +Q AI AIS+AL F D K +K +++LL DPR
Sbjct: 65 FYIKVSGGGINSQAEAISLAISRALCKF-----DINHKPILK------EQNLLTRDPRMV 113
Query: 484 EPKKFGGPGARARYQKSYR 540
E KK+G +R +Q S R
Sbjct: 114 ERKKYGKKKSRKNFQFSKR 132
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 61.3 bits (142), Expect = 6e-08
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+KT+TA + +G G + VNG+PLD R + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
KGGG Q AIR I++ALI DE K +K + + D R+ E KK
Sbjct: 66 KGGGINGQAGAIRHGITRALIE-----SDETLKPALK------EAGFVTRDSRQVERKKL 114
Query: 499 GGPGARARYQKSYR 540
G AR R Q S R
Sbjct: 115 GLRKARKRPQFSKR 128
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 60.9 bits (141), Expect = 8e-08
Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRP-LDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+KT+ A G G + VNG P L+ L L++P++ G EK DI VTV
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQDLEQPLVATGTEK--DFDITVTV 68
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
KGGG Q A R I++AL+ + Y +K ++ + LL D R E KK+
Sbjct: 69 KGGGFTGQAGATRLGIARALLVASEDY-----RKGLRAV------GLLTRDARIKERKKY 117
Query: 499 GGPGARARYQKSYR 540
G GAR Q S R
Sbjct: 118 GLRGARRAPQYSKR 131
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 60.1 bits (139), Expect = 1e-07
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSGVDIRVT 315
G++K A A + K G G + VNG+PLD L L+ +++ P++L+ +E DI V
Sbjct: 11 GKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFDIEVK 68
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKY 399
V GGG AQ AI+ ISKAL+ + ++
Sbjct: 69 VLGGGFAAQADAIKHGISKALVEYAPEF 96
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 58.4 bits (135), Expect = 5e-07
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+KT++A + + G G + +NG PLD R + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
+GGG Q AIR I++ALI +Y +E + ++ + DPR E KK
Sbjct: 71 QGGGDSGQAGAIRHGITRALI----QYDEEGGEGGTWRSTLR-KAGFVTRDPRMVERKKV 125
Query: 499 GGPGARARYQKSYR 540
G GAR Q S R
Sbjct: 126 GLHGARRGTQFSKR 139
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 56.4 bits (130), Expect = 2e-06
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 112 REPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQ-YKLQEPILLLGKEK 288
+ IQ GR+K A + + G+G + VNG+ L+ P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 289 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 468
+ D+ + V GGG QV A R +++A++ +K E K+E+K + L
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATRLGLARAVL--QEK---EDMKQELK------SQGFLTR 109
Query: 469 DPRRCEPKKFGGPGARARYQKSYR 540
DPR+ E KK+G AR +Q S R
Sbjct: 110 DPRKKERKKYGRKKARKSFQFSKR 133
>UniRef50_O51313 Cluster: 30S ribosomal protein S9; n=87; cellular
organisms|Rep: 30S ribosomal protein S9 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 136
Score = 56.4 bits (130), Expect = 2e-06
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+K++ A Y + G G ++VN R D ++ L+ P++L D+ + V
Sbjct: 16 GRRKSSVARVYIREGSGNIKVNNRDFDSYIQLENLRTMALSPLVL--TNTLGKYDLYINV 73
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q AIR IS+AL +DE++K ++ L D R+ E KKF
Sbjct: 74 YGGGISGQSGAIRHGISRALFK-----LDESNK------MILRSNGFLTRDSRKVERKKF 122
Query: 499 GGPGARARYQKSYR 540
G AR +Q S R
Sbjct: 123 GQKKARKSFQFSKR 136
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 54.4 bits (125), Expect = 7e-06
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+KTA A K G G L +NG+ L D + + ++ P L E F VD+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVEAP--LKATETFGKVDVWVRV 138
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q AI I++AL A+ ++ + S L D R E KKF
Sbjct: 139 TGGGTTGQTGAIVLGIARALEAYNNQFHETLSAGR-----------FLTRDSRMVERKKF 187
Query: 499 GGPGARARYQKSYR 540
G AR +Q S R
Sbjct: 188 GFKKARKSFQFSKR 201
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 54.0 bits (124), Expect = 1e-05
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLLGK-EKFSGVDIRVT 315
GR+K +TA + + G G +++N R L+ R Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
V GGG Q AIR I++AL+ + DEA + ++ + D R+ E KK
Sbjct: 67 VSGGGTTGQAGAIRHGITRALMQY-----DEALRGPLR------KEGYVTRDARQVERKK 115
Query: 496 FGGPGARARYQKSYR 540
G AR R Q S R
Sbjct: 116 IGLHKARKRPQFSKR 130
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 54.0 bits (124), Expect = 1e-05
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPL-DLVEPR--LLQYKLQEPILLLGKEK 288
P + + GR+KT+ A A K G G + VN + + D ++ R +++ ++ LL ++K
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQDK 69
Query: 289 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVA 468
+ D+ + V GGG QV AIR A+++A+ ++ A KKE L
Sbjct: 70 Y---DLNLNVTGGGTTGQVGAIRHALARAICRIKPEF-RPAVKKE----------GFLTR 115
Query: 469 DPRRCEPKKFGGPGARARYQKSYR 540
DPR E KK+G AR Q S R
Sbjct: 116 DPRMVERKKYGLHKARRGTQFSKR 139
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 53.2 bits (122), Expect = 2e-05
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLL-GKEKFS 294
++ + GR+KT+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 295 GVDIRVTVKGGGHVAQVYAIRQAISKAL 378
DIR V GGG Q A+R AI++AL
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIARAL 91
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 53.2 bits (122), Expect = 2e-05
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +1
Query: 142 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 499 GGPGARARY 525
G GAR ++
Sbjct: 383 GQEGARRKF 391
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 53.2 bits (122), Expect = 2e-05
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 142 GRKKTATAVAYC--KRGHGVLRVNGR-PLDLVEPRLLQYKLQEPILLLG-KEKFSGVDIR 309
GR+K++TA Y + G + +N R P D +L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 310 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 489
V VKGGG Q AIR I +ALI F ++K +L + L D R E
Sbjct: 67 VVVKGGGFTGQAGAIRLGIVRALIKF---------NPDLKKLL--KTKKLTTRDKRAKER 115
Query: 490 KKFGGPGARARYQKSYR 540
KKFG GAR Q + R
Sbjct: 116 KKFGLYGARRAPQFTKR 132
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 52.8 bits (121), Expect = 2e-05
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSGVDIRVTV 318
G++K A A + K G G + VN + R +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q A+R IS+AL FY+ + KK L D R E KK+
Sbjct: 98 VGGGLSGQAGAVRHGISRAL-TFYEPELRAVLKK----------GGFLTRDSRVVERKKY 146
Query: 499 GGPGARARYQKSYR 540
G AR +Q S R
Sbjct: 147 GRAKARRSFQFSKR 160
>UniRef50_O14006 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=1; Schizosaccharomyces pombe|Rep: 40S
ribosomal protein S9, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 132
Score = 52.0 bits (119), Expect = 4e-05
Identities = 41/128 (32%), Positives = 60/128 (46%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
G++K++ A G G VNG P D+ R++ K L + + ++ TV
Sbjct: 12 GKRKSSKATVKMLPGTGKFYVNGSPFDVYFQRMVHRK-HAVYPLAACNRLTNYNVWATVH 70
Query: 322 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 501
GGG Q A+ AISK+LI + E S K+ V D ++ D R+ E KK G
Sbjct: 71 GGGPTGQSGAVHAAISKSLI------LQEPSLKQ-----VIKDTHCVLNDKRKVERKKTG 119
Query: 502 GPGARARY 525
P AR +Y
Sbjct: 120 QPKARKKY 127
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 51.2 bits (117), Expect = 7e-05
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+K + A + K+G G + VNGR +D + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGGH Q A+ I+KALI F D ++ +K L D R E KK
Sbjct: 87 AGGGHTGQAGAMVHGIAKALILF-----DSENRAVLK------TEKLNTRDSRSVERKKP 135
Query: 499 GGPGARARYQKSYR 540
G AR +Q S R
Sbjct: 136 GRRKARRSFQFSKR 149
>UniRef50_Q9X1G4 Cluster: 30S ribosomal protein S9; n=9;
Bacteria|Rep: 30S ribosomal protein S9 - Thermotoga
maritima
Length = 134
Score = 50.8 bits (116), Expect = 9e-05
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLV-----EPRLLQYKLQEPILLLGKEKFSGVDI 306
GR+KTA A Y + G G ++VNG+ + + P ++ + EP+ + D+
Sbjct: 11 GRRKTAVARVYLRPGEGKVKVNGKEYESLNDYFKNPAWTKHAI-EPLEV--TNTLGKFDL 67
Query: 307 RVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCE 486
+ V GGG Q A+R I++AL+ + Q ++ +L +Y +L DPR E
Sbjct: 68 VIRVNGGGLSGQSGAVRLGIARALLQYDQ---------NLRPVLKKY--KMLTRDPREVE 116
Query: 487 PKKFGGPGARARYQKSYR 540
KK+G AR Q S R
Sbjct: 117 RKKYGLKKARRAPQFSKR 134
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 50.8 bits (116), Expect = 9e-05
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPR-LLQYKLQEPILLLGKEKFSGVDIRVTV 318
G++K A A + K G G + VN + R +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q A+R ISKAL +Y+ + KK L D R E KK+
Sbjct: 98 VGGGLSGQAGAVRHGISKAL-TYYEPALRAVLKK----------GGFLTRDSRVVERKKY 146
Query: 499 GGPGARARYQKSYR 540
G AR +Q S R
Sbjct: 147 GKAKARRSFQFSKR 160
>UniRef50_Q8SXF0 Cluster: RH44312p; n=5; Diptera|Rep: RH44312p -
Drosophila melanogaster (Fruit fly)
Length = 395
Score = 50.0 bits (114), Expect = 2e-04
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +1
Query: 148 KKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKG 324
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 325 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 504
GG Q AIR I+ +L +F + + E+ + LL D RR E KKFG
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383
Query: 505 PGARARY 525
GAR +Y
Sbjct: 384 EGARRKY 390
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 50.0 bits (114), Expect = 2e-04
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+K + A G G + +NGR LD L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q AIR I++AL+ VD + +K L D R E KK+
Sbjct: 68 DGGGFTGQAGAIRHGIARALL-----QVDPEYRPSLK------SAGFLTRDARMKERKKY 116
Query: 499 GGPGARARYQKSYR 540
G AR Q S R
Sbjct: 117 GLKAARRAPQFSKR 130
>UniRef50_Q8FS19 Cluster: 30S ribosomal protein S9; n=32;
Bacteria|Rep: 30S ribosomal protein S9 - Corynebacterium
efficiens
Length = 182
Score = 49.2 bits (112), Expect = 3e-04
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
GR+K A G G + NGR L D +L Q ++ P++LLG+E DI +
Sbjct: 62 GRRKRAIVRVRMVAGSGEITCNGRTLEDYFPNKLHQQLIKAPLVLLGRE--GQFDIHANL 119
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG Q A R AI++AL A+ + A + +K L D R E KK
Sbjct: 120 GGGGPTGQAGAFRLAIARALNAY-----NPAERPTLK------KAGFLTRDARAVERKKA 168
Query: 499 GGPGARARYQKSYR 540
G AR Q S R
Sbjct: 169 GLHKARRAPQYSKR 182
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 48.4 bits (110), Expect = 5e-04
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNG-RPLDLVEPR-LLQYKLQEPILLLG-KEKFSGVDIRV 312
GR+KT+ A G+G +NG ++ ++ + L + +QEP+ L K +F ++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEF---NLII 76
Query: 313 TVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPK 492
VKGGG V QV AI+ I++AL F Y + K L DPR E K
Sbjct: 77 KVKGGGLVGQVNAIKLGIARALCEFDLTYRNSLKLK-----------GFLTRDPRCKERK 125
Query: 493 KFGGPGARARYQKSYR 540
K+G AR Q S R
Sbjct: 126 KYGLKKARKAPQFSKR 141
>UniRef50_Q9ZDU0 Cluster: 30S ribosomal protein S9; n=29;
Proteobacteria|Rep: 30S ribosomal protein S9 -
Rickettsia prowazekii
Length = 161
Score = 46.8 bits (106), Expect = 0.001
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Frame = +1
Query: 76 TRVKMAAVQEARREPIQAVQVF---GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQ 246
T+ + +V + +E I +V F G++K A A + K G G + VN + L+ P
Sbjct: 16 TKESLKSVLKIPKEKIDSVSKFYATGKRKNAIARVWLKVGKGKIVVNNKILNQYFPSETY 75
Query: 247 YK-LQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 423
K + +P +L + D+ TVKGGG Q AI ISKAL + S
Sbjct: 76 VKTILQPFILT--KTIDQYDVICTVKGGGISGQKGAILHGISKAL---------DKSAPC 124
Query: 424 IKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 540
IL + LL D R E KK+G AR + Q S R
Sbjct: 125 FHAILRK--GGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
>UniRef50_Q8YPK7 Cluster: 30S ribosomal protein S9; n=26; cellular
organisms|Rep: 30S ribosomal protein S9 - Anabaena sp.
(strain PCC 7120)
Length = 138
Score = 46.8 bits (106), Expect = 0.001
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQY--KLQEPILLLGKEKFSGVDIRVT 315
GR+K+A A G G L VNG+P DL Y ++ P+ LG E + DI V
Sbjct: 17 GRRKSAVARVRLVPGTGQLIVNGKPGDLYFQFNANYLGVIKAPLETLGLE--NEYDILVK 74
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
+GGG Q ++R +++AL +D ++ +K L DPR E KK
Sbjct: 75 AEGGGLTGQADSVRLGVARALC-----QLDPENRPPLK------TEGYLTRDPRAKERKK 123
Query: 496 FGGPGARARYQKSYR 540
+G AR Q S R
Sbjct: 124 YGLHKARKAPQYSKR 138
>UniRef50_P38120 Cluster: 37S ribosomal protein S9, mitochondrial
precursor; n=7; Saccharomycetales|Rep: 37S ribosomal
protein S9, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 278
Score = 46.4 bits (105), Expect = 0.002
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL--LLGKEKFSGVDIRVT 315
G++K++TA + RG G + VNGR L+ L+ K +E I+ L E +I T
Sbjct: 158 GKRKSSTAKVFVVRGTGEILVNGRQLN---DYFLKMKDRESIMYPLQVIESVGKYNIFAT 214
Query: 316 VKGGGHVAQVYAIRQAISKALIAF 387
GGG Q +I AI+KAL+ F
Sbjct: 215 TSGGGPTGQAESIMHAIAKALVVF 238
>UniRef50_Q9AR08 Cluster: 9S ribosomal protein; n=4; Poaceae|Rep: 9S
ribosomal protein - Zea mays (Maize)
Length = 221
Score = 46.0 bits (104), Expect = 0.003
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Frame = +1
Query: 124 QAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLV---EPRLLQYKLQEPILLLGKEKFS 294
Q + GR+KTA A + G G + +N R P ++Y + P++ LG EK
Sbjct: 94 QRITATGRRKTAIARVVLQEGTGKVFINFRDAKEYLQGNPMWMEY-CKVPLMTLGFEK-- 150
Query: 295 GVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADP 474
D+ V V GGG Q AI +++AL+ + A++ +K LL D
Sbjct: 151 NYDVFVKVHGGGLSGQAQAICLGVARALVK-----ISNANRVPLK------SEGLLTRDT 199
Query: 475 RRCEPKKFGGPGARARYQKSYR 540
R E KK G AR R Q S R
Sbjct: 200 RIVERKKAGLKKARKRPQFSKR 221
>UniRef50_Q1IU83 Cluster: 30S ribosomal protein S9; n=22; cellular
organisms|Rep: 30S ribosomal protein S9 - Acidobacteria
bacterium (strain Ellin345)
Length = 131
Score = 45.2 bits (102), Expect = 0.004
Identities = 38/133 (28%), Positives = 62/133 (46%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
GR+K+A A + + G G +VNG+ + Q + + L+L E + ++ V
Sbjct: 11 GRRKSAVARVFLRPGSGEFKVNGKGFEEYFVTEAQRQSAKSPLVL-TETIATFNVVANVS 69
Query: 322 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 501
GGG Q A++ +++AL Q++ E K + + D R E KK+G
Sbjct: 70 GGGVNGQADAVKMGLARAL----QEFNAELRGKMKAE-------GFMTRDARMKERKKYG 118
Query: 502 GPGARARYQKSYR 540
GAR R+Q S R
Sbjct: 119 QKGARKRFQFSKR 131
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 45.2 bits (102), Expect = 0.004
Identities = 39/125 (31%), Positives = 60/125 (48%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
G++KT++AV + G G + VNG+ L PR L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 322 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 501
GGG Q A+ A+ +AL+ V E + +K IL + ++ D RR E KK G
Sbjct: 254 GGGVTGQAEAVTLALGRALL------VHEPA---LKPILRK--AGVITVDARRVERKKPG 302
Query: 502 GPGAR 516
AR
Sbjct: 303 HVKAR 307
>UniRef50_Q8DMK7 Cluster: 30S ribosomal protein S9; n=6; cellular
organisms|Rep: 30S ribosomal protein S9 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 137
Score = 45.2 bits (102), Expect = 0.004
Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRP-LDLVEPRLLQYKL-QEPILLLGKEKFSGVDIRVT 315
GR+K+A A G G L +NGR D ++ + L + P+ LG E + DI V
Sbjct: 16 GRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLE--NSYDIYVN 73
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
GGG Q AIR I++AL +D ++K +K L DPR E +K
Sbjct: 74 ATGGGLTGQADAIRLGIARALC-----QLDIENRKPLK------TEGYLTRDPRAKERRK 122
Query: 496 FGGPGARARYQKSYR 540
+G AR Q S R
Sbjct: 123 YGLRKARKAPQYSKR 137
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 44.0 bits (99), Expect = 0.010
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 112 REPIQAVQVFGRKKTATAVAYCKRGHGVLRV 204
R P VQ FGRKKTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q7UEY4 Cluster: 30S ribosomal protein S9; n=20;
Bacteria|Rep: 30S ribosomal protein S9 - Rhodopirellula
baltica
Length = 137
Score = 43.6 bits (98), Expect = 0.014
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSGVDIRVT 315
GR+K++ A + G G + +NG+ ++ V + +Y + E + G + VD+ +
Sbjct: 17 GRRKSSVARVRVRPGSGKITINGKSIEEYFVNDQH-RYAITETLEAAGLTE--SVDLLIR 73
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
V GGG Q A+R +++AL + DEA ++ + S L D R E KK
Sbjct: 74 VSGGGMTGQAGAVRMGLARALCSH-----DEALHDPMR------EGSFLTRDSRMKERKK 122
Query: 496 FGGPGARARYQKSYR 540
G GAR Q S R
Sbjct: 123 PGLRGARRGVQFSKR 137
>UniRef50_O67723 Cluster: 30S ribosomal protein S9; n=2; Aquifex
aeolicus|Rep: 30S ribosomal protein S9 - Aquifex
aeolicus
Length = 147
Score = 43.2 bits (97), Expect = 0.018
Identities = 36/107 (33%), Positives = 51/107 (47%)
Frame = +1
Query: 220 DLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 399
+ V+ L K+ P + G E G I TV+GGG AQ AI ++KAL+
Sbjct: 54 EYVQRETLYNKIMYPFKVTGHEGKFG--IYATVRGGGISAQAEAIMYGVAKALLQH---- 107
Query: 400 VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 540
+++ L + LL D R E KK+G GARA+Y+ S R
Sbjct: 108 -----NPDLRPTLKK--AGLLTRDAREKERKKYGQMGARAKYRWSKR 147
>UniRef50_UPI0000E7FB25 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S9 isoform 1; n=1; Gallus gallus|Rep:
PREDICTED: similar to mitochondrial ribosomal protein S9
isoform 1 - Gallus gallus
Length = 340
Score = 42.7 bits (96), Expect = 0.024
Identities = 45/130 (34%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +1
Query: 142 GRKKT--ATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVT 315
G +KT ATAV Y G G + VNG + P +LQ + Q ++ D T
Sbjct: 218 GVRKTSRATAVVY-DNGTGKITVNGIDILRYFP-VLQDREQLLFPFQFLDRVGKHDAICT 275
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
V GGG +Q AIR A +KAL + +V E ++ LL DPR E KK
Sbjct: 276 VSGGGRSSQAGAIRLATAKAL----RSFVTET------EVEFMRQAGLLTVDPRVRERKK 325
Query: 496 FGGPGARARY 525
G GAR ++
Sbjct: 326 PGQEGARRKF 335
>UniRef50_A2R4K9 Cluster: Contig An15c0060, complete genome; n=5;
Pezizomycotina|Rep: Contig An15c0060, complete genome -
Aspergillus niger
Length = 221
Score = 42.3 bits (95), Expect = 0.032
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPIL-LLGKEKFSGVDIRVTV 318
G++K ++AV G G + VNG+ L+ PRL + + + L + ++ TV
Sbjct: 101 GKRKASSAVVQLVEGEGEVLVNGKTLNEAFPRL--HDRESAVWPLRCTSRLDKYNVWATV 158
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
+GGG Q AI A+++AL+ V E + +K IL + ++ D RR E KK
Sbjct: 159 RGGGVTGQAEAITLAVARALL------VHEPA---LKPILRK--AGVVTVDARRVERKKP 207
Query: 499 GGPGAR 516
G AR
Sbjct: 208 GHVKAR 213
>UniRef50_O94150 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=5; Saccharomycetales|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Candida albicans
(Yeast)
Length = 336
Score = 42.3 bits (95), Expect = 0.032
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 145 RKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYK-LQEPILLLGKEKFSGVDIRVTVK 321
++K++ A Y +G G + VNG+ L P + K L P ++ +E V +VT
Sbjct: 217 KRKSSIAKIYLVKGEGEVLVNGKSLIEFFPNIYARKNLLYPFQVVEQEGKYNVFAQVT-- 274
Query: 322 GGGHVAQVYAIRQAISKALIAF 387
GGG+ Q AI AI+KAL+ F
Sbjct: 275 GGGYTGQSEAIMYAIAKALVVF 296
>UniRef50_Q5GS63 Cluster: 30S ribosomal protein S9; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: 30S
ribosomal protein S9 - Wolbachia sp. subsp. Brugia
malayi (strain TRS)
Length = 148
Score = 41.1 bits (92), Expect = 0.073
Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGK------EKFSGVD 303
GR+K + A + K G G VN + +LL Y +E + + K D
Sbjct: 27 GRRKESAARVWIKSGSGKFSVNQ------QDKLLSYFKRESVCQIVKMPLIVTSTLDKYD 80
Query: 304 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRC 483
+ TVKGGG Q A+ ISKAL Q ++ IL + L +
Sbjct: 81 VFATVKGGGLSGQAGALAHGISKALSKISQ---------DLYSILRK--SGYLTRNSCVK 129
Query: 484 EPKKFGGPGARARYQKSYR 540
E KK+G GARA+YQ S R
Sbjct: 130 ERKKYGQRGARAKYQFSKR 148
>UniRef50_A5FRV9 Cluster: Ribosomal protein S9; n=5; Bacteria|Rep:
Ribosomal protein S9 - Dehalococcoides sp. BAV1
Length = 132
Score = 41.1 bits (92), Expect = 0.073
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYK-LQEPILLLG-KEKFSGVDIRVT 315
GR+KTA A G+GV+ ++G+P++ R+ + + P+++ KF+ V +
Sbjct: 12 GRRKTAVATVKLMSGNGVIVIDGKPIEERFTRIQERNVILNPMMVTDTMGKFNAV---IK 68
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
V GGG Q AI I++AL + DE + +K LL D R E KK
Sbjct: 69 VLGGGVTGQSGAIAHGIARAL-----EKTDEKLRATLK------SNGLLTRDDRTKERKK 117
Query: 496 FGGPGARARYQKSYR 540
G AR Q + R
Sbjct: 118 PGLKRARKAPQYTKR 132
>UniRef50_Q2GXL6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 321
Score = 41.1 bits (92), Expect = 0.073
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL-GKEKFSGVDIRVTV 318
G++K++ A AY G G + +NG+ L R+ + + + L ++ ++ V
Sbjct: 201 GKRKSSIARAYVVEGDGQVLINGKTLPDYFGRI--HDRESAVWALHSTDRIDKYNVWARV 258
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
+GGG Q A+ AI+KAL+A + A K ++ + DPRR E KK
Sbjct: 259 EGGGTTGQAEALTLAIAKALLAH-----EPALKPALR------RAGCVTRDPRRVERKKH 307
Query: 499 GGPGAR 516
G AR
Sbjct: 308 GRVKAR 313
>UniRef50_Q82DL8 Cluster: 30S ribosomal protein S9; n=23; cellular
organisms|Rep: 30S ribosomal protein S9 - Streptomyces
avermitilis
Length = 173
Score = 40.3 bits (90), Expect = 0.13
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Frame = +1
Query: 115 EPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPL-DLVEPRLLQYKLQEPILLLGKEKF 291
EP Q GR+K A A G G ++NGR L D ++ Q ++ EP +L E
Sbjct: 44 EP-QPAAGLGRRKNAIARVRIVPGTGKWKINGRTLEDYFPNKVHQQEVNEPFKVLELE-- 100
Query: 292 SGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 471
D+ + GGG Q A+R +++AL +EA + L + L D
Sbjct: 101 GRYDVIARISGGGVSGQAGALRLGVARAL--------NEADVDNNRGALKK--AGFLKRD 150
Query: 472 PRRCEPKKFGGPGARARYQKSYR 540
R E KK G AR Q S R
Sbjct: 151 DRAVERKKAGLKKARKAPQYSKR 173
>UniRef50_A0DAX2 Cluster: Chromosome undetermined scaffold_43, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_43,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 700
Score = 39.9 bits (89), Expect = 0.17
Identities = 38/133 (28%), Positives = 60/133 (45%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
GR+K++ K+G G + VNG+ L + + +L L VD+ V ++
Sbjct: 580 GRRKSSICYVQLKKGVGEVTVNGKNLINYFTHPIYRRTALRVLELAHLSCL-VDVNVVIR 638
Query: 322 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 501
GG AQ I A+S+A++ + + KK + +L L D R+ E KK G
Sbjct: 639 GGSQSAQSQCICSALSRAIVK-----MCPSIKKIFRKLL------LTRTDSRQVERKKLG 687
Query: 502 GPGARARYQKSYR 540
AR +Y S R
Sbjct: 688 LYKARKKYPYSRR 700
>UniRef50_Q7S7R6 Cluster: 40S ribosomal protein S9, mitochondrial
precursor; n=3; Pezizomycotina|Rep: 40S ribosomal
protein S9, mitochondrial precursor - Neurospora crassa
Length = 314
Score = 39.9 bits (89), Expect = 0.17
Identities = 37/125 (29%), Positives = 57/125 (45%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVK 321
G++K ++A A+ G G + VNG+ L R+ + L + ++ V V+
Sbjct: 194 GKRKASSARAFVVEGTGEVLVNGKTLAEYFGRVHDRE-SAVWALRATNRIDKYNVWVKVE 252
Query: 322 GGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 501
GGG Q AI AI+KAL+A + A K ++ + DPR+ E KK G
Sbjct: 253 GGGTTGQAEAITLAIAKALLAH-----EPALKPALR------RAGCVTRDPRKVERKKHG 301
Query: 502 GPGAR 516
AR
Sbjct: 302 HVKAR 306
>UniRef50_Q7Q0M0 Cluster: ENSANGP00000014497; n=4; Coelomata|Rep:
ENSANGP00000014497 - Anopheles gambiae str. PEST
Length = 84
Score = 39.5 bits (88), Expect = 0.22
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +1
Query: 271 LLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYD 450
LL + + +D+ V GGG +Q A+R I+ AL +F + D+ ++ +
Sbjct: 5 LLFTKMYGKIDVTANVSGGGPSSQAGAVRWGIAMALRSFVDE--DQIARMRV-------- 54
Query: 451 RSLLVADPRRCEPKKFGGPGARARY 525
LL D RR E KK G GAR +Y
Sbjct: 55 AGLLTRDYRRRERKKPGQAGARRKY 79
>UniRef50_Q7P3E8 Cluster: 30S ribosomal protein S9; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
30S ribosomal protein S9 - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 101
Score = 39.1 bits (87), Expect = 0.29
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 142 GRKKTATA-VAYCKRGHGVLRVNGRPLD-LVEPRLLQYKLQEPILLLGKEKFSGVDIRVT 315
GR+KT+ A V G GV +NG+ +D R + K+ E L L E + ++V
Sbjct: 12 GRRKTSVARVRLIPGGQGV-EINGKAMDEYFGGRAILSKIVEQPLAL-TETLNKFAVKVN 69
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQK 396
V GGG+ Q AIR K++I K
Sbjct: 70 VVGGGNSGQAGAIRHGCCKSIITLLMK 96
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 39.1 bits (87), Expect = 0.29
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +1
Query: 127 AVQVFGRKKTATAVAYCKRGHGVLRVNGRPLD--LVEPRLLQYKLQEPILLLGKEKFSGV 300
A + GR+K++ A +G G +N R L ++ LQ L F
Sbjct: 11 AFRGLGRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLTQTNNTF--- 67
Query: 301 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKY 399
DIRVTV+GGG Q AIR I++AL+ Y
Sbjct: 68 DIRVTVRGGGLAGQAGAIRLGIARALLEISADY 100
>UniRef50_A5K195 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 604
Score = 38.7 bits (86), Expect = 0.39
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRP-LDLVEPRLLQY-KLQEPILLLGKEKFSGVDIRVT 315
G+KK A A+ + +RG+ L +N R ++ ++ K+ P+L L + V RV
Sbjct: 482 GKKKRAVAMVFLQRGNNNLIINNRDGYQYLQYQIFNINKIFSPLLHLCMHRHFNVVARVV 541
Query: 316 VKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
GGG Q AI A+ KY+ +IK + + D R+ E KK
Sbjct: 542 --GGGLSGQSVAIFHAL--------VKYIVYNLSLKIKPYFRSF--KFMTVDSRKVERKK 589
Query: 496 FGGPGARARYQKSYR 540
+G AR R Q S R
Sbjct: 590 YGLKKARKRKQYSKR 604
>UniRef50_P32060 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Euglena|Rep: Chloroplast 30S ribosomal protein S9 -
Euglena gracilis
Length = 134
Score = 38.3 bits (85), Expect = 0.52
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYC---KRGHGVLRVNG-RPLDLVEPRLLQYKLQ-EPILLLGKE 285
+ +++V G++K++ A K G G + +NG + + ++ L K+ P LL
Sbjct: 3 LNSIEVIGKRKSSIAKIILFLPKDGGGEILINGEKAFNYLQNNLRTLKVVCSPFELLNIN 62
Query: 286 KFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 444
+ + VKGGG Q AI+ AISK+L F +K ++ K ++ L +
Sbjct: 63 NYK---VHAYVKGGGLSGQADAIKLAISKSLSVFIEK--EDKKKLKVNGFLTR 110
>UniRef50_A7NSS9 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 37.9 bits (84), Expect = 0.68
Identities = 14/45 (31%), Positives = 30/45 (66%)
Frame = -3
Query: 399 IFLVESDKGFRDGLSDCINLCNMSTTFYSHSNIHTRELFLA*QKD 265
+ L+E ++GF + L+DC+ L ++TTFY+ ++++ E ++D
Sbjct: 26 VLLIEGNEGFGNALADCVYLGGVTTTFYAGAHVNVGETVATEKED 70
>UniRef50_P56358 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlorella vulgaris|Rep: Chloroplast 30S ribosomal
protein S9 - Chlorella vulgaris (Green alga)
Length = 137
Score = 37.9 bits (84), Expect = 0.68
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGV-LRVNGRPL-DLVEPRL--LQYKLQEPILLLGKEKFSGVDIR 309
G +KTA A G G + VNG+ D + LQ L+ + K+ D+
Sbjct: 15 GGRKTAKARVQLLPGTGTKVMVNGKQASDYFQNNAVYLQNMFTPRDLVKTETKY---DVH 71
Query: 310 VTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEP 489
+ V+GGG AQ A++ A+SKA + F+ +Y +K K LL D R E
Sbjct: 72 ILVEGGGLSAQAQAVKLALSKAFVDFFPEY-----RKVFK------KPGLLTRDARIKER 120
Query: 490 KKFGGPGARARYQKSYR 540
+K+G AR Q S R
Sbjct: 121 RKYGLKKARKAPQFSKR 137
>UniRef50_Q4N5E3 Cluster: 40S ribosomal protein S9, putative; n=2;
Theileria|Rep: 40S ribosomal protein S9, putative -
Theileria parva
Length = 639
Score = 37.1 bits (82), Expect = 1.2
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGK-EKFSGVDIRVTV 318
G++K A+ Y + G+G + +N R +++L+E + L K E + +I
Sbjct: 517 GKRKRGKAMVYLEPGNGNIIINNRD-GYQYVYYNEFRLREILEPLSKLEINTNFNIVAKT 575
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
KGGG Q AIR A+ +Y+ ++K IL ++D L+ D RR E KK
Sbjct: 576 KGGGISGQSVAIRHAL--------VRYLYRILSPKLKYILRKFD--LVSIDRRRTERKKT 625
Query: 499 GGPGARARYQKSYR 540
AR + + S R
Sbjct: 626 NLRKARKKEKYSKR 639
>UniRef50_A7ANP2 Cluster: Ribosomal protein S9, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S9, putative -
Babesia bovis
Length = 683
Score = 37.1 bits (82), Expect = 1.2
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +1
Query: 115 EPIQAVQVF--GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGK-E 285
EP++ +V+ G +KT+ AV Y + G+G + +N R R ++L+E + L
Sbjct: 550 EPVKFTKVYERGSRKTSVAVVYLEPGNGHIIINDRD-GYQYVRYCTHRLREILEPLDSIY 608
Query: 286 KFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLV 465
+ +I V GGG Q AIR A+ +Y+ ++ L R L
Sbjct: 609 AYKRFNIVARVNGGGISGQSGAIRHALC--------RYISRVLAPKLDSYLSM--RGLGK 658
Query: 466 ADPRRCEPKKFGGPGARARYQKSYR 540
AD R+ E KK AR + S R
Sbjct: 659 ADTRQVERKKTNLRKARKKEHYSKR 683
>UniRef50_Q1JSU2 Cluster: Ribosomal protein s9, putative; n=1;
Toxoplasma gondii|Rep: Ribosomal protein s9, putative -
Toxoplasma gondii
Length = 286
Score = 36.7 bits (81), Expect = 1.6
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 142 GRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYK---LQEPILLLGKEKFSGV-DIR 309
G +K A A +RG G +RVN DL Y + +P L G +G+ D+
Sbjct: 165 GTRKRAAAHVIIRRGTGQVRVNNDE-DLYVRWPFYYNRMDVLQPFFLTGT---AGIYDLF 220
Query: 310 VTVKGGGHVAQVYAIRQAISKALIA 384
+ V+GGG Q A+R A+ +AL++
Sbjct: 221 IHVRGGGSSGQAGAVRLAVGRALVS 245
>UniRef50_A5K530 Cluster: 30S ribosomal protein S9, putative; n=5;
Plasmodium|Rep: 30S ribosomal protein S9, putative -
Plasmodium vivax
Length = 304
Score = 36.3 bits (80), Expect = 2.1
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 115 EPIQAVQVFGRKKTATAVAYCKRGHGVLRVNG-RPLDLVEPRLL-QYKLQEPILLLGKEK 288
E ++ + G K ++A Y KRG G+++VN L + P + + EP +
Sbjct: 174 EWLEESEGIGTNKRSSAYVYIKRGSGIVKVNDEEDLYIRWPYFYNRMDVLEPFYVTNTA- 232
Query: 289 FSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEI 426
D+ + +KGGG Q A R A+ +AL+ DE + I
Sbjct: 233 -CVFDVFIKLKGGGISGQSKAARLAVGRALLNACPLIYDELKQHHI 277
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 35.5 bits (78), Expect = 3.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 751 ENPGVTQLNRLAAQSPFS 804
ENPGVTQLNRLAA PF+
Sbjct: 78 ENPGVTQLNRLAAHPPFA 95
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 35.5 bits (78), Expect = 3.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 751 ENPGVTQLNRLAAQSPFS 804
ENPGVTQLNRLAA PF+
Sbjct: 32 ENPGVTQLNRLAAHPPFA 49
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 35.5 bits (78), Expect = 3.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 751 ENPGVTQLNRLAAQSPFS 804
ENPGVTQLNRLAA PF+
Sbjct: 36 ENPGVTQLNRLAAHPPFA 53
>UniRef50_Q2TXK4 Cluster: Enoyl reductase domain of yeast-type FAS1;
n=3; Aspergillus|Rep: Enoyl reductase domain of
yeast-type FAS1 - Aspergillus oryzae
Length = 2063
Score = 35.5 bits (78), Expect = 3.6
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 106 ARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYK-LQEPILL 273
ARR P+ + VF R ++ V K G GV + G LD +P L K L P+LL
Sbjct: 505 ARRPPVSHIIVFDRGGLSSLVKKLKEGQGVRVIQGSDLDSRDPELGTMKDLFSPLLL 561
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 35.5 bits (78), Expect = 3.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 751 ENPGVTQLNRLAAQSPFS 804
ENPGVTQLNRLAA PF+
Sbjct: 18 ENPGVTQLNRLAAHPPFA 35
>UniRef50_A6DHM5 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 108
Score = 34.3 bits (75), Expect = 8.4
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 220 DLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIR---QAISKALIAF- 387
DL+E L K +E +L L K++ G +R+ VKGGG Y+I Q +++F
Sbjct: 3 DLIE---LTEKAKEHVLELIKKEDEGKGLRLGVKGGGCSGLSYSITFDGQKERDNILSFE 59
Query: 388 -YQKYVDEASKKEIKDILVQYDRSL 459
++ +D S +K I++ YD SL
Sbjct: 60 GFEVLLDPKSAVYLKGIVLDYDDSL 84
>UniRef50_A0UPY8 Cluster: Putative uncharacterized protein
precursor; n=12; Burkholderia|Rep: Putative
uncharacterized protein precursor - Burkholderia
multivorans ATCC 17616
Length = 848
Score = 34.3 bits (75), Expect = 8.4
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +1
Query: 196 LRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKA 375
LRV+GR V L+ +L+ + LLG+E + +D+ V+ G + QV A +
Sbjct: 499 LRVDGRERVAVFAELVDDRLRRLLQLLGRETIARLDLDQLVQFGFAIEQVARQLDARHRV 558
Query: 376 LIAFYQKYVDEASKKEIKDILVQYDRSL 459
+AF Q+ +++ +LV+ DR L
Sbjct: 559 RLAFVQR------DRQVHVLLVRRDRHL 580
>UniRef50_Q5RBV9 Cluster: Putative uncharacterized protein
DKFZp469B0933; n=7; Theria|Rep: Putative uncharacterized
protein DKFZp469B0933 - Pongo pygmaeus (Orangutan)
Length = 300
Score = 34.3 bits (75), Expect = 8.4
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 331 HVAQVYAIRQAISKALIAFYQKYVD--EASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
H++QV++ ++ + LIAFY+ + E + +E + LV D+ L V E KKF
Sbjct: 73 HISQVWSFQKKQTDLLIAFYKHRITKLETAMQETQQALVSQDKELSVLRKENGELKKF 130
>UniRef50_O20029 Cluster: Chloroplast 30S ribosomal protein S9; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast 30S ribosomal
protein S9 - Chlamydomonas reinhardtii
Length = 191
Score = 34.3 bits (75), Expect = 8.4
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +1
Query: 220 DLVEPRLLQYKLQEPILLL----GKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAF 387
D+V P L L+ L G E D V VKGGG + Q AIR IS+AL
Sbjct: 62 DMVSPDLSLTNLESTFTNLMQFSGGENAVKFDTIVKVKGGGLMGQTEAIRLGISRALCLL 121
Query: 388 YQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 495
A++ + +I + +A P + +K
Sbjct: 122 STNTNPSANQNNLPNIYIPEGEGEALAIPNASDIRK 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,060,345,670
Number of Sequences: 1657284
Number of extensions: 19481450
Number of successful extensions: 44726
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 43074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44677
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 159295392625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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