Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A10_e169_02.seq
(1499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 262 2e-69
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 262 2e-69
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 262 2e-69
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 262 2e-69
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 140 2e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 113 1e-24
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 53 2e-06
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 53 2e-06
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 32 6.3
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 32 6.3
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 262 bits (642), Expect = 2e-69
Identities = 118/141 (83%), Positives = 137/141 (97%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 262 bits (642), Expect = 2e-69
Identities = 118/141 (83%), Positives = 137/141 (97%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 262 bits (642), Expect = 2e-69
Identities = 118/141 (83%), Positives = 137/141 (97%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 262 bits (642), Expect = 2e-69
Identities = 118/141 (83%), Positives = 137/141 (97%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPR 477
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 478 RCEPKKFGGPGARARYQKSYR 540
RCE KKFGGPGARARYQKSYR
Sbjct: 126 RCESKKFGGPGARARYQKSYR 146
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 140 bits (338), Expect = 2e-32
Identities = 61/83 (73%), Positives = 76/83 (91%)
Frame = +1
Query: 118 PIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSG 297
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+G
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 298 VDIRVTVKGGGHVAQVYAIRQAI 366
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 113 bits (273), Expect = 1e-24
Identities = 58/108 (53%), Positives = 76/108 (70%)
Frame = +1
Query: 121 IQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGV 300
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ +G+
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 301 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 444
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 53.2 bits (122), Expect = 2e-06
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +1
Query: 142 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 382
Query: 499 GGPGARARY 525
G GAR ++
Sbjct: 383 GQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 53.2 bits (122), Expect = 2e-06
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Frame = +1
Query: 142 GRKKTATAVAYC-KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTV 318
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 319 KGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKF 498
GGG AQ AIR A++KAL +F + DE LL DPR E KK
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRVRERKKP 288
Query: 499 GGPGARARY 525
G GAR ++
Sbjct: 289 GQEGARRKF 297
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 6.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 229 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 405
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.9 bits (69), Expect = 6.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 229 EPRLLQYKLQEPILLLGKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 405
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,891,740
Number of Sequences: 237096
Number of extensions: 3342507
Number of successful extensions: 11453
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11449
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22252508404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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