Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A09_e161_01.seq
(1550 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 29 0.12
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 25 1.5
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 25 1.5
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 2.6
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 24 3.5
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 4.6
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 23 4.6
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 6.1
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 23 8.0
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 28.7 bits (61), Expect = 0.12
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
F C+VC FG+ +L H+R H +
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGE 160
Score = 22.6 bits (46), Expect = 8.0
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
++C+ C F + L H R+H +
Sbjct: 191 YRCEHCDRQFVQVANLRRHLRVHTGE 216
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 25.0 bits (52), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIH 667
++C +C L F LN H R+H
Sbjct: 106 YECKLCLLRFSQSGNLNRHMRVH 128
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVVATGVSTGNDVTMPPHIPILSSD 766
F+C VC F + + H R H+ + + S + T+ H+ I S +
Sbjct: 50 FRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSS--TLTKHLRIHSGE 103
Score = 23.0 bits (47), Expect = 6.1
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVVATGVSTGNDVT 733
++C C F L AH R H+ + V S + VT
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 66
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 25.0 bits (52), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIH 667
++C +C L F LN H R+H
Sbjct: 362 YECKLCLLRFSQSGNLNRHMRVH 384
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/56 (23%), Positives = 23/56 (41%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVVATGVSTGNDVTMPPHIPILSSD 766
F+C VC F + + H R H+ + + S + T+ H+ I S +
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSS--TLTKHLRIHSGE 359
Score = 23.0 bits (47), Expect = 6.1
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVVATGVSTGNDVT 733
++C C F L AH R H+ + V S + VT
Sbjct: 278 YRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVT 322
Score = 22.6 bits (46), Expect = 8.0
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +2
Query: 605 CDVCGLMFGHLTLLNAHKRIHAXD 676
C +CG + + L H R H+ +
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGE 275
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 2.6
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 554 QIAPNGIQNTISNISFKCDV--CGLMFGHLTLLNAHKRIHAXD 676
++ P G+ NI C + CG ++G + L AH R H +
Sbjct: 301 RLGPAGVHLRKKNIH-SCHIPGCGKVYGKTSHLKAHLRWHTGE 342
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.8 bits (49), Expect = 3.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIH 667
FKC +CG F L H +H
Sbjct: 163 FKCKICGRAFTTKGNLKTHMGVH 185
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 23.4 bits (48), Expect = 4.6
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 572 IQNTISNISFKCDVCGLMFGHLTLLNAHKRIHA 670
++N + F+C+ C + ++LN+H + H+
Sbjct: 250 LRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHS 282
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 23.4 bits (48), Expect = 4.6
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +2
Query: 572 IQNTISNISFKCDVCGLMFGHLTLLNAHKRIHA 670
++N + F+C+ C + ++LN+H + H+
Sbjct: 8 LRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHS 40
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.0 bits (47), Expect = 6.1
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 602 KCDVCGLMFGHLTLLNAHKRIHAXD 676
KC +C F LL H R H +
Sbjct: 9 KCTICPKAFSRPWLLQGHIRTHTGE 33
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 22.6 bits (46), Expect = 8.0
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
++C+ C F + L H R+H +
Sbjct: 38 YRCEHCDRQFVQVANLRRHLRVHTGE 63
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,019
Number of Sequences: 336
Number of extensions: 4427
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46705800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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