Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A09_e161_01.seq
(1550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated p... 33 0.41
AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein. 33 0.41
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 33 0.72
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 32 0.95
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 32 0.95
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 32 1.3
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 32 1.3
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 32 1.3
Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical pr... 31 1.7
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 1.7
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.7
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.7
AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein. 31 1.7
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 31 2.2
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 31 2.9
U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical pr... 30 3.8
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 30 5.1
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 30 5.1
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 30 5.1
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 29 6.7
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 29 6.7
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 29 6.7
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 6.7
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 29 6.7
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 29 8.9
>U29378-6|AAA68726.2| 310|Caenorhabditis elegans Uncoordinated
protein 98 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.41
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 593 ISFKCDVCGLMFGHLTLLNAHKRIH 667
+ +KC CGL F + L AH+RIH
Sbjct: 111 VFYKCRFCGLTFNFMNTLRAHERIH 135
>AF515600-1|AAM76039.1| 310|Caenorhabditis elegans UNC-98 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.41
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 593 ISFKCDVCGLMFGHLTLLNAHKRIH 667
+ +KC CGL F + L AH+RIH
Sbjct: 111 VFYKCRFCGLTFNFMNTLRAHERIH 135
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.72
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 509 IAQPFSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKRIHA 670
+ +P + + +Q NG++ N FKC++C F + LN H++IH+
Sbjct: 182 VCEPANSLSSTRHQTLTGSNGVRPV--NRQFKCEICEKQFANKPNLNRHRKIHS 233
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 32.3 bits (70), Expect = 0.95
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
F+C CG F L AHKRIH +
Sbjct: 166 FRCQTCGKAFSQAANLTAHKRIHTGE 191
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 32.3 bits (70), Expect = 0.95
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
F+C CG F L AHKRIH +
Sbjct: 107 FRCQTCGKAFSQAANLTAHKRIHTGE 132
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 31.9 bits (69), Expect = 1.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 521 FSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKRIHAXD 676
F Y LVN M++ F CDVC +F L HKRIH+ +
Sbjct: 120 FKAKYKLVNHMRVHTG-------ERPFLCDVCNKVFARSENLKIHKRIHSGE 164
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 31.9 bits (69), Expect = 1.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 521 FSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKRIHAXD 676
F Y LVN M++ F CDVC +F L HKRIH+ +
Sbjct: 133 FKAKYKLVNHMRVHTG-------ERPFLCDVCNKVFARSENLKIHKRIHSGE 177
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 31.9 bits (69), Expect = 1.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 521 FSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKRIHAXD 676
F Y LVN M++ F CDVC +F L HKRIH+ +
Sbjct: 121 FKAKYKLVNHMRVHTG-------ERPFLCDVCNKVFARSENLKIHKRIHSGE 165
>Z79755-8|CAB02113.1| 270|Caenorhabditis elegans Hypothetical
protein F43G9.11 protein.
Length = 270
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 590 NISFKCDVCGLMFGHLTLLNAHKRIH 667
N S +C+VCG F L LL H R H
Sbjct: 188 NASHECNVCGKRFSRLWLLQGHLRSH 213
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
+KCD+C F H L HKR+H+ +
Sbjct: 509 YKCDICEKAFKHKHHLTEHKRLHSGE 534
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
+KCD+C F H L HKR+H+ +
Sbjct: 509 YKCDICEKAFKHKHHLTEHKRLHSGE 534
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.5 bits (68), Expect = 1.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
+KCD+C F H L HKR+H+ +
Sbjct: 509 YKCDICEKAFKHKHHLTEHKRLHSGE 534
>AF169201-1|AAF01678.1| 270|Caenorhabditis elegans CES-1 protein.
Length = 270
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 590 NISFKCDVCGLMFGHLTLLNAHKRIH 667
N S +C+VCG F L LL H R H
Sbjct: 188 NASHECNVCGKRFSRLWLLQGHLRSH 213
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 31.1 bits (67), Expect = 2.2
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 539 LVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKR 661
+V ++ + I+N + F+C VC FG ++LL H R
Sbjct: 92 MVPASSLSIDEIRNAVRKSMFRCKVCKNRFGEMSLLERHLR 132
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +2
Query: 596 SFKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVVATGVSTGNDVTMPPHIPILSSDHTG 775
SF+C C + F T+ H +HA S G GN + HI S D G
Sbjct: 270 SFECKHCTIKFHDATMSIMHNALHA--PGSPFKCAICGAECGNKIVFTMHIITASHDFGG 327
>U55376-1|AAA98003.1| 434|Caenorhabditis elegans Hypothetical
protein F16H11.3 protein.
Length = 434
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 509 IAQPFSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLT 640
IA FS+ Y M PN + + S + + VC LM G LT
Sbjct: 373 IAMSFSHGYLSALAMGYTPNVVPSHYSRFAAQLSVCTLMVGLLT 416
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 29.9 bits (64), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVV 700
F+CD C F + L HKRIH+ DA + V
Sbjct: 112 FECDTCNARFNRRSTLWNHKRIHS-DAKPFVCTV 144
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
++CDVC F L HKRIH +
Sbjct: 168 YRCDVCDKTFSRSNTLITHKRIHTGE 193
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 29.9 bits (64), Expect = 5.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIH 667
FKC++CG+ F T + H R H
Sbjct: 479 FKCEICGMAFSQKTPMRLHLRRH 501
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 29.5 bits (63), Expect = 6.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 599 FKCDVCGLMFGHLTLLNAHKRIHAXD 676
+ CDVC F L HKR+HA +
Sbjct: 592 YTCDVCDAKFTQYVHLRLHKRLHANE 617
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = +2
Query: 557 IAPNGIQNTI------SNISFKCDVCGLMFGHLTLLNAHKRIHAXDADSXITVV 700
I PN +NT S S C+VCG + + L HKR H D I ++
Sbjct: 19 ITPNCSENTKLFMIFQSRKSIICEVCGKKYSSKSALAKHKRTHETDKRCKIKLI 72
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +2
Query: 503 CYIAQPFSYNYALVNQMQIAPNGIQNTISNISFKCDVCGLMFGHLTLLNAHKRIHAXD 676
C Q +N L+ + QI + I S C+VCG + + L HKR H D
Sbjct: 43 CSTCQKRFHNAELLRKHQIV-----HDIPKKSIICEVCGKKYSSKSALAKHKRTHETD 95
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 605 CDVCGLMFGHLTLLNAHKRIHAXDADSXITVVAT-----GVSTGNDVTMPPHIPILSSDH 769
C++CG + LN H + H ADS + + S+G + P P+LS+
Sbjct: 66 CEICGAHYSSKIYLNRHMKKHLETADSGAHAIPSLGSPAPSSSGFATMIVPPAPLLSAIS 125
Query: 770 TG 775
+G
Sbjct: 126 SG 127
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 29.5 bits (63), Expect = 6.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 605 CDVCGLMFGHLTLLNAHKRIHAXD 676
C VCG F + ++L +HKR H +
Sbjct: 106 CTVCGKGFSYFSILESHKRSHTGE 129
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 29.5 bits (63), Expect = 6.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 602 KCDVCGLMFGHLTLLNAHKRIHA 670
KCD+C F + T LN HK +H+
Sbjct: 3 KCDICHQKFSNKTNLNRHKVMHS 25
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 602 KCDVCGLMFGHLTLLNAHKRIH 667
KC CG F + LN H RIH
Sbjct: 109 KCKTCGKCFNRSSTLNTHVRIH 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,755,569
Number of Sequences: 27780
Number of extensions: 412096
Number of successful extensions: 1192
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4473305038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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