BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_A07_e145_01.seq (1543 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4; ... 37 1.2 >UniRef50_Q4XTX4 Cluster: Putative uncharacterized protein; n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium chabaudi Length = 1031 Score = 37.1 bits (82), Expect = 1.2 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = -3 Query: 434 IGNNKYRSFFLQYIFPSLLXQYISEVNFVKSFXIXVSFKINY 309 I N K R + L YIF +YI N KSF + S+K+ Y Sbjct: 283 ISNKKIRRYILNYIFNMYYEKYIGLKNLYKSFDLQESYKLKY 324 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 682,517,315 Number of Sequences: 1657284 Number of extensions: 7697469 Number of successful extensions: 13435 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 12821 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13417 length of database: 575,637,011 effective HSP length: 104 effective length of database: 403,279,475 effective search space used: 164941305275 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -