Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A04_e121_02.seq
(1483 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 112 1e-25
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 112 1e-25
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 112 1e-25
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 112 1e-25
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 112 1e-25
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 112 1e-25
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 112 1e-25
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 112 1e-25
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 112 1e-25
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 112 1e-25
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 112 1e-25
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 27 8.7
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 8.7
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 112 bits (269), Expect = 1e-25
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 3/163 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK WTP + E+ K L + +L H + + + TDASD A+GAVL K D
Sbjct: 670 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 729
Query: 270 G-WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVE--LKPFTVFTDHKPITSA 440
+ P+G++S K++ AQ YS D+E+LAI +S+K++R +E ++PF + TDH+ +
Sbjct: 730 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 789
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
S+ + R R+ F+ F +I Y G NH+ DALSR+
Sbjct: 790 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRI 832
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 270 GWVPLGFFSKKLNNAQRKYSPYD-RELLAI 356
GW+ +GF S K+ N++ K + +D E+L I
Sbjct: 76 GWLAIGFLSYKIANSRLKLNIWDPYEILGI 105
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 318 VERCSVSSRKILEEPSLNLIXA 253
+ERCS S+ LEEP LI A
Sbjct: 527 LERCSTSNGSTLEEPDRELIIA 548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,023,988
Number of Sequences: 5004
Number of extensions: 45140
Number of successful extensions: 145
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 826566558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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