Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A04_e121_02.seq
(1483 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 90 6e-18
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 90 6e-18
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 89 1e-17
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 88 3e-17
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 88 3e-17
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 87 4e-17
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 86 1e-16
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 86 1e-16
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 85 3e-16
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 85 3e-16
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 84 4e-16
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 83 9e-16
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 80 7e-15
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 79 1e-14
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 78 3e-14
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 77 5e-14
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 75 3e-13
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 71 4e-12
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 69 1e-11
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 69 2e-11
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 69 2e-11
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 69 2e-11
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 69 2e-11
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 69 2e-11
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 69 2e-11
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 69 2e-11
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 68 4e-11
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 67 7e-11
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 64 5e-10
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 61 3e-09
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 53 9e-07
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 53 9e-07
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 90.2 bits (214), Expect = 6e-18
Identities = 54/159 (33%), Positives = 80/159 (50%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K WT E +F KS L N TLL +P+ I TDAS A GAVL +
Sbjct: 579 KKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGH 638
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +FR + K FTV TDH+P+T
Sbjct: 639 QLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMV 698
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R L+ + ++ + Y+ G NHV DALSR+
Sbjct: 699 NPSSKLTRIR-LE-LEEYNFTVEYLKGKDNHVADALSRI 735
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 90.2 bits (214), Expect = 6e-18
Identities = 54/159 (33%), Positives = 80/159 (50%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K WT E +F KS L N TLL +P+ I TDAS A GAVL +
Sbjct: 342 KKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGH 401
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +FR + K FTV TDH+P+T
Sbjct: 402 QLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMV 461
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R L+ + ++ + Y+ G NHV DALSR+
Sbjct: 462 NPSSKLTRIR-LE-LEEYNFTVEYLKGKDNHVADALSRI 498
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 89.0 bits (211), Expect = 1e-17
Identities = 51/159 (32%), Positives = 81/159 (50%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K W+ E +FE K L + TLL +P+ R I+TDAS A GAVL +
Sbjct: 168 KKNVPFEWSSECQNAFEYLKENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGI 227
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +FR + K FT+ TDH+P+T
Sbjct: 228 QLPIAYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMT 287
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R L+ + ++ + Y+ G N V DALSR+
Sbjct: 288 NPSSKLTRMR-LE-LEEYDFTVEYLRGKDNFVADALSRI 324
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 88.2 bits (209), Expect = 3e-17
Identities = 51/159 (32%), Positives = 81/159 (50%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K WT + +FE K L N TLL +P+ I+TDAS A GAVL +
Sbjct: 473 KKNVKFEWTADCQHAFEHLKKQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQNYNGI 532
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +F+ + + FTV TDH+P+T
Sbjct: 533 HLPVAYASRSFTKGESNKSTTEQELSAIHWAINHFKPYIYGRHFTVKTDHRPLTYLFSMV 592
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R LD + ++ + Y+ G N+V DALSR+
Sbjct: 593 NPSSKLTRMR-LD-LEEYEFTVEYLKGKDNYVADALSRI 629
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 87.8 bits (208), Expect = 3e-17
Identities = 51/159 (32%), Positives = 80/159 (50%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K W+ E +FE K L TLL +P+ R I+TDAS A GAVL +
Sbjct: 168 KKNVPFEWSSEYQNAFEYLKENLMYPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGI 227
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +FR + K FT+ TDH+P+T
Sbjct: 228 QLPIAYASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMT 287
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R L+ + ++ + Y+ G N V DALSR+
Sbjct: 288 NPSSKLTRMR-LE-LEEYDFTVEYLRGKDNFVADALSRI 324
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 87.4 bits (207), Expect = 4e-17
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Frame = +3
Query: 84 QCLKATTLISWT-PELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXK 260
+CLK I T PE +F+ K ++ +L P+ + TDASD A+GAVL
Sbjct: 468 KCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVL--- 524
Query: 261 SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSA 440
S G PL + S+ LN + YS ++ELLAI + K FR + + F + +DH+P+ S
Sbjct: 525 SQDGH-PLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL-SW 582
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRVEXYQQDYGS*QNTH 611
+ D S + R+ +S+F DI+YI G N V DALSR++ ++ Y S Q H
Sbjct: 583 LYRMKDPNS-KLTRWRVKLSEFDFDIKYIKGKENCVADALSRIK-LEETYLSEQTQH 637
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 86.2 bits (204), Expect = 1e-16
Identities = 50/159 (31%), Positives = 79/159 (49%)
Frame = +3
Query: 93 KATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSG 272
K WT E +FE K+ L TLL +P+ I TDAS A GAVL +
Sbjct: 334 KKNVQFEWTAECNDAFEYLKTELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQDHNGQ 393
Query: 273 WVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKN 452
+P+ + S+ + S ++EL AI+ +I +FR + K F V +DH+P++
Sbjct: 394 QLPVAYASRMFTQGESNKSTTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLFSMK 453
Query: 453 SDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ + R LD + ++ + Y+ G NH+ DALSR+
Sbjct: 454 NPSSKLTRMR-LD-LEEYDFTVEYLKGKDNHIADALSRI 490
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 85.8 bits (203), Expect = 1e-16
Identities = 51/161 (31%), Positives = 86/161 (53%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK ++ + +FE K+ L+N +L HP+ + TDAS+ A+GAVL S
Sbjct: 579 LKGKRQVTTDKDFVDAFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQ 638
Query: 270 GWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXK 449
P+ F S+ L++ + YS ++E+LAI ++KYFR + FT+ TDHKP+
Sbjct: 639 NDRPVCFASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPL--IWLM 696
Query: 450 NSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRVE 572
N + + + R+ + ++ +I + G N + DALSR +
Sbjct: 697 NFKEPNSKIIRWRLQLMEYNFEIIHKKGSQNVIADALSRAD 737
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 84.6 bits (200), Expect = 3e-16
Identities = 52/150 (34%), Positives = 82/150 (54%)
Frame = +3
Query: 123 ELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKK 302
E SFE K + + +L +P+ ++ TDAS+ AIGAVL P+ + S+
Sbjct: 555 EYIESFEKLKVLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQNHK----PVCYASRT 610
Query: 303 LNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFR 482
LN + Y+ ++ELLAI + KYFR + +PF V +DHKP+ N + + + R
Sbjct: 611 LNEHEINYATIEKELLAIVWATKYFRSYLFGRPFEVLSDHKPL--VWLNNIKEPNMKLQR 668
Query: 483 YLDFISQFTTDIRYIAGDHNHVXDALSRVE 572
+ +++F I+Y+ G NHV DALSR +
Sbjct: 669 WKIKLNEFDYKIKYLPGKENHVADALSRTK 698
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 84.6 bits (200), Expect = 3e-16
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Frame = +3
Query: 87 CLKATTLISW-TPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKS 263
CLK + PE +F+ K ++N +L P+ + + TDAS+ A+GAVL S
Sbjct: 416 CLKKDKKVDIKNPEYIEAFKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVL---S 472
Query: 264 DSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAX 443
G P+ + S+ LN+ + YS ++ELLAI + K FR + + F + +DH+P+
Sbjct: 473 QDGH-PISYISRTLNDHETNYSTIEKELLAIVWATKTFRHYLLGRHFEIASDHQPLCWLH 531
Query: 444 XKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
++++ ++++ DI+Y+ G NHV DALSR+
Sbjct: 532 KMKEPNAKLTRWKFR--LAEYDFDIKYVKGKENHVADALSRI 571
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 84.2 bits (199), Expect = 4e-16
Identities = 51/150 (34%), Positives = 83/150 (55%)
Frame = +3
Query: 123 ELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKK 302
E +FE K+ L+N +L +P+ + TDAS+ AIGAVL P+ F S+
Sbjct: 477 EFKKAFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSDRPVCFASRT 536
Query: 303 LNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFR 482
L+ A+ YS ++E+LAI +++YFR + + FT+ TDHKP+T N + + + R
Sbjct: 537 LSAAETNYSTIEKEMLAIIWAVQYFRPYLFGRRFTIITDHKPLT--WLMNFKQPNSKIVR 594
Query: 483 YLDFISQFTTDIRYIAGDHNHVXDALSRVE 572
+ + ++ ++ Y G N + DALSR E
Sbjct: 595 WRLQLQEYDFEVVYKKGSQNVIADALSRPE 624
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 83.0 bits (196), Expect = 9e-16
Identities = 50/153 (32%), Positives = 85/153 (55%)
Frame = +3
Query: 135 SFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNNA 314
+FE K + + +L HP+ + ++ TDAS+ AIGAVL + P+ + S+ LN
Sbjct: 474 AFEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEHK----PICYASRTLNEH 529
Query: 315 QRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYLDF 494
+ YS ++ELLAI + KYFR + + F + +DH+P+ + + + + R+
Sbjct: 530 EVNYSAIEKELLAIVWATKYFRSYLFGRKFEIHSDHRPL--VWLDSIKEPNMKLQRWKIK 587
Query: 495 ISQFTTDIRYIAGDHNHVXDALSRVEXYQQDYG 593
+++F I+Y+ G NHV DALSRV+ + G
Sbjct: 588 LNEFDYHIKYLPGKENHVADALSRVKIEENFLG 620
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 80.2 bits (189), Expect = 7e-15
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Frame = +3
Query: 84 QCLKATTLISWT-PELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXK 260
+CLK I E +F+ K ++ +L PN + TDAS+ A+GAVL
Sbjct: 430 KCLKKGVKIDTKHKEYIEAFQKLKLLISEDPILKIPNFERKFVLTTDASNVALGAVL--- 486
Query: 261 SDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSA 440
S G P+ + S+ LN + YS ++ELLAI + K FR + + + +DH+P+
Sbjct: 487 SQDGH-PISYISRTLNEHEVNYSAIEKELLAIVWATKTFRHYLLGRHCEIASDHQPL--C 543
Query: 441 XXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRVEXYQQDYG 593
+ + + R+ +S++ DI+YI G NHV DALSR++ Q +G
Sbjct: 544 WLHKLKEPNSKLTRWKIRLSEYDFDIKYIKGKENHVADALSRIKIEQAFFG 594
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 79.4 bits (187), Expect = 1e-14
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Frame = +3
Query: 57 GTRHNILSGQCLKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSA 236
G NI S Q K + T SF D KS L ++ +LA P + TDAS+ A
Sbjct: 388 GLYANIKSSQSSKVPITLDETA--LQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWA 445
Query: 237 IGAVLQXKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVF 413
IGAVL P+ + S+ LN + Y+ ++E+LAI S+ R ++ V+
Sbjct: 446 IGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVY 505
Query: 414 TDHKPITSAXXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
TDH+P+T A + + R+ I ++ ++ Y G N V DALSR+
Sbjct: 506 TDHQPLTFALGNRNFNAKLK--RWKARIEEYNCELIYKPGKSNVVADALSRI 555
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 78.2 bits (184), Expect = 3e-14
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Frame = +3
Query: 87 CLKATTLISWTP-ELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKS 263
CLK T I E +FE K+ + +L P+ + TDAS+ A+GAVL S
Sbjct: 468 CLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVL---S 524
Query: 264 DSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAX 443
+G P+ F S+ LN+ + YS ++ELLAI + K FR + + F + +DH+P+
Sbjct: 525 QNGH-PISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPL--RW 581
Query: 444 XKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRVE 572
N + + R+ +S++ I YI G N V DALSR++
Sbjct: 582 LHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRIK 624
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 77.4 bits (182), Expect = 5e-14
Identities = 44/145 (30%), Positives = 80/145 (55%)
Frame = +3
Query: 135 SFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNNA 314
+F+ K + + ++ +P+ I+TDAS+ A+GAVL + + + S+ L N
Sbjct: 411 AFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNKV----ISYASRSLKNH 466
Query: 315 QRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYLDF 494
+ YS ++ELLAIY S K+F++ + + F + TDH+P+ N + + + R+
Sbjct: 467 ELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPL--VWLNNLKEPNLKLQRWKVQ 524
Query: 495 ISQFTTDIRYIAGDHNHVXDALSRV 569
+++F DI +I G N + D LSR+
Sbjct: 525 LNEFDFDITFIKGKENALADGLSRI 549
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQXKSD 266
L + +S E +F+ KS L + ++ H P+ + + TDAS+ A+GAVL ++
Sbjct: 469 LSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR 528
Query: 267 SGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAX 443
P+ F S+ L+ A+ Y+ ++E+LAI ++K + ++ +FTDH+P+T +
Sbjct: 529 ----PISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSL 584
Query: 444 XKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRVEXYQQ 584
+S + R R+ ++ ++ +I Y G N V DALSR +Q
Sbjct: 585 --SSWNGNARIKRWKAYLEEYDYEIFYKPGRENTVADALSRGPTVEQ 629
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 70.9 bits (166), Expect = 4e-12
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 138 FEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL-QXKSDSGWVPLGFFSKKLNNA 314
F K L + +LA N + + DAS S GAVL Q K D W P+ FFSK+ +
Sbjct: 991 FNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDI 1050
Query: 315 QRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYLDF 494
+ KY ++ E LAI S++ FR + + F + TD + K + +PR R+
Sbjct: 1051 ESKYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKK--ELNPRIARWALE 1108
Query: 495 ISQFTTDIRYIAGDHNHVXDALSR 566
+ +I + AG DALSR
Sbjct: 1109 FQGYDFEIVHRAGSRMQHVDALSR 1132
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 69.3 bits (162), Expect = 1e-11
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = +3
Query: 108 ISWTPELXXSFEDSKSGLANAT-LLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPL 284
IS+ +FE K+ L + +L +P+ R + TDAS +GAVL S G P+
Sbjct: 468 ISFDERQCSAFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVL---SQDG-KPV 523
Query: 285 GFFSKKLNNAQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAXXKNSDK 461
S+ L + + ++ +RELLAI ++K R ++ +K +FTDH+P+T A +
Sbjct: 524 TMISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYAVSDRNPN 583
Query: 462 CSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSR 566
+ R+ FI + I Y G +V DALSR
Sbjct: 584 AKIK--RWKAFIDEHNAKIFYKPGKETYVADALSR 616
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 68.9 bits (161), Expect = 2e-11
Identities = 40/120 (33%), Positives = 63/120 (52%)
Frame = +3
Query: 210 IMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMV 389
I TDAS A GAVL + +P+ + S+ + S ++EL AI+ +I +FR V
Sbjct: 5 ITTDASKQACGAVLSQDHNGQQLPVAYASRSFTKGESNKSTTEQELAAIHWAINHFRPYV 64
Query: 390 ELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYLDFISQFTTDIRYIAGDHNHVXDALSRV 569
+ F V +DH+P++ + + R LD + +F + Y+ G NHV DALSR+
Sbjct: 65 YGRHFLVQSDHRPLSYLFSMRNPSSKLTRMR-LD-LEEFEFTVEYLKGKDNHVADALSRI 122
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 501
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALSR 585
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 536
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 537 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 594
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 595 SYIDQHNAKVFYKPGKENFVADALSR 620
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 536
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 537 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 594
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 595 SYIDQHNAKVFYKPGKENFVADALSR 620
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 501
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALSR 585
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 501
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 502 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 559
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 560 SYIDQHNAKVFYKPGKENFVADALSR 585
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 68.5 bits (160), Expect = 2e-11
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P+ + + TDAS S IGAVL S G P+ S+ L
Sbjct: 899 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVL---SQEG-RPITMISRTLKQ 954
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 955 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 1012
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 1013 SYIDQHNAKVFYKPGKENFVADALSR 1038
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 67.7 bits (158), Expect = 4e-11
Identities = 43/153 (28%), Positives = 76/153 (49%)
Frame = +3
Query: 108 ISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLG 287
I+W+ EL + L N L +P+ + + TDAS GA+L + +S +
Sbjct: 710 ITWSAELEEIRLKVVTILTNEPALVIFDPQYPIELHTDASACGYGAILLHRIESKPHVIE 769
Query: 288 FFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXKNSDKCS 467
+FSK + + +Y Y+ E LA+ +++K+FR + + F V+TD + ++ K +
Sbjct: 770 YFSKTTTSVESRYHSYELETLAVVKAVKHFRHYLIGREFVVYTDCNSLKASRTKID--LT 827
Query: 468 PRQFRYLDFISQFTTDIRYIAGDHNHVXDALSR 566
PR R+ ++ F +I+Y G D LSR
Sbjct: 828 PRVHRWWAYLQSFNFEIQYREGKRMAHVDFLSR 860
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 66.9 bits (156), Expect = 7e-11
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+F+ ++ LA+ +L +P + + TDAS S IGAVL + P+ S+ L
Sbjct: 451 AFQRLRNILASEDVILKYPVFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 506
Query: 312 AQRKYSPYDRELLAIYESI-KYFRFMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
++ Y+ +RELLAI ++ K F+ + +FTDH+P+T A + + R+
Sbjct: 507 PEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIK--RWK 564
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
+I Q + Y G N V DALSR
Sbjct: 565 SYIDQHNAKVFYKPGKENFVADALSR 590
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 64.1 bits (149), Expect = 5e-10
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
Frame = +3
Query: 135 SFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDSGWVPLGFFSKKLNN 311
+FE ++ LA+ +L +P+ + + TDAS IGAVL + P+ S+ L++
Sbjct: 448 AFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGR----PITMISRTLSD 503
Query: 312 AQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPITSAXXKNSDKCSPRQFRYL 488
+ Y+ +RELLAI ++ R ++ +K +FTDH+P+T A +++ + R+
Sbjct: 504 REVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPLTFAVSESNPNAKIK--RWK 561
Query: 489 DFISQFTTDIRYIAGDHNHVXDALSR 566
I + I Y G +N V DALSR
Sbjct: 562 ARIDESGARIFYKPGRNNLVADALSR 587
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 61.3 bits (142), Expect = 3e-09
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQXKSD 266
L + +S E +F+ KS L + ++ H P+ + + TDAS+ A+GAVL ++
Sbjct: 313 LSSKKSVSLNREAIEAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR 372
Query: 267 SGWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFR-FMVELKPFTVFTDHKPIT 434
P+ F S+ L+ A+ Y+ ++E+LAI ++K + ++ +FTDH+P+T
Sbjct: 373 ----PISFLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLT 425
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 53.2 bits (122), Expect = 9e-07
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK + + P S K L N +L + A + TDAS +GAVL K +
Sbjct: 747 LKKDAIFNIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEG 806
Query: 270 GWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXK 449
+ P+ F+S+K A+ Y E+ A Y ++K FR + PF + TD K
Sbjct: 807 SFHPVCFWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQT-TK 865
Query: 450 NSDKCSPRQF-RYLDFISQFTTDIRYIAGDHNHVXDALSR 566
+D PR+ ++ ++ F + AG+ D LSR
Sbjct: 866 KAD--VPREVGPWILYMQDFNFQPEHRAGERMRHVDFLSR 903
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 53.2 bits (122), Expect = 9e-07
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +3
Query: 90 LKATTLISWTPELXXSFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQXKSDS 269
LK + + P S K L N +L + A + TDAS +GAVL K +
Sbjct: 441 LKKDAIFNIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEG 500
Query: 270 GWVPLGFFSKKLNNAQRKYSPYDRELLAIYESIKYFRFMVELKPFTVFTDHKPITSAXXK 449
+ P+ F+S+K A+ Y E+ A Y ++K FR + PF + TD K
Sbjct: 501 SFHPVCFWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQT-TK 559
Query: 450 NSDKCSPRQF-RYLDFISQFTTDIRYIAGDHNHVXDALSR 566
+D PR+ ++ ++ F + AG+ D LSR
Sbjct: 560 KAD--VPREVGPWILYMQDFNFQPEHRAGERMRHVDFLSR 597
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,870,483
Number of Sequences: 53049
Number of extensions: 496646
Number of successful extensions: 1012
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8229622680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -