Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A03_e113_01.seq
(1504 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 0.83
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 1.1
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 25 1.9
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 1.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 5.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 5.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 5.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 5.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 5.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 5.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 5.9
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 23 7.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 7.8
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.8 bits (54), Expect = 0.83
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +3
Query: 519 RRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHA 698
+RG+ + ++L+ P TPPS GPL +V +R S + P+
Sbjct: 210 KRGQKSDADSDSDVVNLSKPGTPPSG----EPGNGPLDLSVSSRKRSNDDSVSQPPNRKP 265
Query: 699 QTDAAPRFTPTGRRP 743
+TD P+ P P
Sbjct: 266 RTDFKPQVLPQWPSP 280
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 25.4 bits (53), Expect = 1.1
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +2
Query: 545 TVSESDAFSSPLNSP---LTHTLRTTRARPLVTYRGSRPPPPN 664
T S +SS SP T T RTT RP T +RP N
Sbjct: 1036 TTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 24.6 bits (51), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 462 RRRTEVHTGDRPLG 503
RR VHTG+RP G
Sbjct: 54 RRHLRVHTGERPYG 67
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 24.6 bits (51), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 462 RRRTEVHTGDRPLG 503
RR VHTG+RP G
Sbjct: 207 RRHLRVHTGERPYG 220
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 103 LSVSTSPPGKPATSTASQN 121
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTASQN 165
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 22.6 bits (46), Expect = 7.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 725 SNGPAPPVHSSTGGVPYYTTNV 790
S P PP H + +PY NV
Sbjct: 142 STNPTPPPHYTYQIIPYEALNV 163
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 373 ISVSCSPPMYPGTDACIQN 317
+SVS SPP P T QN
Sbjct: 147 LSVSTSPPGKPATSTTSQN 165
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,017
Number of Sequences: 336
Number of extensions: 5616
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45067000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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