BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030712_A03_e113_01.seq (1504 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 105 6e-23 AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 105 6e-23 L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 79 1e-14 AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 79 1e-14 AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 76 6e-14 Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 31 1.6 AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 31 1.6 AC024845-4|AAK84623.2| 214|Caenorhabditis elegans Hypothetical ... 31 2.8 Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 30 3.7 DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 30 3.7 AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 30 3.7 Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 29 6.5 AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 8.6 >L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. Length = 152 Score = 105 bits (253), Expect = 6e-23 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 5/152 (3%) Frame = +1 Query: 109 MASGVTVSDACKTTYEEIKKDKKHRYVXFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 282 MASGV V +CK Y+ + +H Y+ F I +++ I VE VG +NA Y F+E+++K Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 Query: 283 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 459 ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 Query: 460 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 549 L G++ +QA+++S+ +++V+ L + R Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151 >AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated protein 60, isoform c protein. Length = 152 Score = 105 bits (253), Expect = 6e-23 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 5/152 (3%) Frame = +1 Query: 109 MASGVTVSDACKTTYEEIKKDKKHRYVXFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 282 MASGV V +CK Y+ + +H Y+ F I +++ I VE VG +NA Y F+E+++K Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 Query: 283 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 459 ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 Query: 460 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 549 L G++ +QA+++S+ +++V+ L + R Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151 >L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. Length = 165 Score = 78.6 bits (185), Expect = 1e-14 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 18/160 (11%) Frame = +1 Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243 M+SGV V +T+++++ + +K +RY+ F I DE ++ VE Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59 Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417 A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118 Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 534 KM+Y+SS A+K SL G Q +D SE S + + KL Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158 >AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated protein 60, isoform a protein. Length = 165 Score = 78.6 bits (185), Expect = 1e-14 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 18/160 (11%) Frame = +1 Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243 M+SGV V +T+++++ + +K +RY+ F I DE ++ VE Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59 Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417 A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118 Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 534 KM+Y+SS A+K SL G Q +D SE S + + KL Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158 >AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated protein 60, isoform b protein. Length = 212 Score = 76.2 bits (179), Expect = 6e-14 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 18/154 (11%) Frame = +1 Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243 M+SGV V +T+++++ + +K +RY+ F I DE ++ VE Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59 Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417 A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118 Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 516 KM+Y+SS A+K SL G Q +D SE S + Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152 Score = 47.6 bits (108), Expect = 2e-05 Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Frame = +1 Query: 334 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 507 Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+ Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197 Query: 508 SQEAVEEKLRATDR 549 +++V+ L + R Sbjct: 198 DEKSVKSDLMSNQR 211 >Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical protein F22E12.1 protein. Length = 763 Score = 31.5 bits (68), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 560 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 661 D + P++ P T T P VT R +RPPPP Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711 >AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical protein F22E12.1 protein. Length = 763 Score = 31.5 bits (68), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 560 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 661 D + P++ P T T P VT R +RPPPP Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711 >AC024845-4|AAK84623.2| 214|Caenorhabditis elegans Hypothetical protein Y65B4BL.7 protein. Length = 214 Score = 30.7 bits (66), Expect = 2.8 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +3 Query: 714 PRFTPTGRRPQFTLQRVVFPITQQTFSVYRGPLPIPTQYSKRPC-AAGF 857 PRF GR P L V+F + F +Y+ IP QY C A GF Sbjct: 18 PRFED-GRHPNVKLFVVIFALLGNIFMIYQSIRDIPRQYRSIICDAFGF 65 >Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical protein Y38F1A.10a protein. Length = 598 Score = 30.3 bits (65), Expect = 3.7 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +2 Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706 L++SE + SP P + + L+T T P + R PP P L QR+ Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236 Query: 707 XXXXVHSNGPAPPVHSSTG 763 SNG PPV S G Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255 >DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated kinase MAX-2 protein. Length = 598 Score = 30.3 bits (65), Expect = 3.7 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +2 Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706 L++SE + SP P + + L+T T P + R PP P L QR+ Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236 Query: 707 XXXXVHSNGPAPPVHSSTG 763 SNG PPV S G Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255 >AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical protein Y38F1A.10a protein. Length = 598 Score = 30.3 bits (65), Expect = 3.7 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +2 Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706 L++SE + SP P + + L+T T P + R PP P L QR+ Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236 Query: 707 XXXXVHSNGPAPPVHSSTG 763 SNG PPV S G Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255 >Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical protein T02G6.2 protein. Length = 314 Score = 29.5 bits (63), Expect = 6.5 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 545 TVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQ 673 T + ++ S L HT+R+T P+V RP PP+ ++ Sbjct: 148 TANSANGVSLTLPRVKNHTIRSTDTVPIVRVPAGRPRPPSKIE 190 >AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical protein Y50D7A.10 protein. Length = 138 Score = 29.1 bits (62), Expect = 8.6 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = +1 Query: 337 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 516 C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132 Query: 517 AVEEK 531 +E K Sbjct: 133 LLESK 137 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,136,282 Number of Sequences: 27780 Number of extensions: 517293 Number of successful extensions: 1793 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1646 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1783 length of database: 12,740,198 effective HSP length: 84 effective length of database: 10,406,678 effective search space used: 4329178048 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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