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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_A03_e113_01.seq
         (1504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.      105   6e-23
AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated...   105   6e-23
L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.       79   1e-14
AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated...    79   1e-14
AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated...    76   6e-14
Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    31   1.6  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    31   1.6  
AC024845-4|AAK84623.2|  214|Caenorhabditis elegans Hypothetical ...    31   2.8  
Z81507-4|CAL49434.1|  598|Caenorhabditis elegans Hypothetical pr...    30   3.7  
DQ523832-1|ABF71877.1|  598|Caenorhabditis elegans P21-activated...    30   3.7  
AL032639-12|CAL49443.1|  598|Caenorhabditis elegans Hypothetical...    30   3.7  
Z81583-2|CAB04670.1|  314|Caenorhabditis elegans Hypothetical pr...    29   6.5  
AC024801-11|AAN84814.2|  138|Caenorhabditis elegans Hypothetical...    29   8.6  

>L18963-1|AAC14457.1|  152|Caenorhabditis elegans unc-60 protein.
          Length = 152

 Score =  105 bits (253), Expect = 6e-23
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
 Frame = +1

Query: 109 MASGVTVSDACKTTYEEIKKDKKHRYVXFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 282
           MASGV V  +CK  Y+ +    +H Y+ F I +++  I VE VG +NA Y  F+E+++K 
Sbjct: 1   MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60

Query: 283 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 459
                ECRY   D E T Q QG    S   K+  + +CPD A V+++MLY+SS  ALK S
Sbjct: 61  VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120

Query: 460 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 549
           L G++    +QA+++S+  +++V+  L +  R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151


>AF024494-2|AAL02463.1|  152|Caenorhabditis elegans Uncoordinated
           protein 60, isoform c protein.
          Length = 152

 Score =  105 bits (253), Expect = 6e-23
 Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
 Frame = +1

Query: 109 MASGVTVSDACKTTYEEIKKDKKHRYVXFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 282
           MASGV V  +CK  Y+ +    +H Y+ F I +++  I VE VG +NA Y  F+E+++K 
Sbjct: 1   MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60

Query: 283 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 459
                ECRY   D E T Q QG    S   K+  + +CPD A V+++MLY+SS  ALK S
Sbjct: 61  VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120

Query: 460 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 549
           L G++    +QA+++S+  +++V+  L +  R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151


>L18963-2|AAC14458.1|  165|Caenorhabditis elegans unc-60 protein.
          Length = 165

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
 Frame = +1

Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243
           M+SGV V    +T+++++ + +K +RY+ F I DE ++ VE                   
Sbjct: 1   MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59

Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417
            A +D F+ED++       +CRY +FDF++T    G    SK  K+  +  CPD A +KK
Sbjct: 60  KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118

Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 534
           KM+Y+SS  A+K SL  G     Q +D SE S + +  KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158


>AF024494-3|AAL02461.1|  165|Caenorhabditis elegans Uncoordinated
           protein 60, isoform a protein.
          Length = 165

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
 Frame = +1

Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243
           M+SGV V    +T+++++ + +K +RY+ F I DE ++ VE                   
Sbjct: 1   MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59

Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417
            A +D F+ED++       +CRY +FDF++T    G    SK  K+  +  CPD A +KK
Sbjct: 60  KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118

Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 534
           KM+Y+SS  A+K SL  G     Q +D SE S + +  KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158


>AF024494-1|AAL02462.2|  212|Caenorhabditis elegans Uncoordinated
           protein 60, isoform b protein.
          Length = 212

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
 Frame = +1

Query: 109 MASGVTVSDACKTTYEEIKKDKK-HRYVXFYIRDEKQIDVETV--------------GGR 243
           M+SGV V    +T+++++ + +K +RY+ F I DE ++ VE                   
Sbjct: 1   MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59

Query: 244 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 417
            A +D F+ED++       +CRY +FDF++T    G    SK  K+  +  CPD A +KK
Sbjct: 60  KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118

Query: 418 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 516
           KM+Y+SS  A+K SL  G     Q +D SE S +
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = +1

Query: 334 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 507
           Q    SE S K+   L++ CPD A V+++MLY+SS  ALK SL G++    +QA+++S+ 
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197

Query: 508 SQEAVEEKLRATDR 549
            +++V+  L +  R
Sbjct: 198 DEKSVKSDLMSNQR 211


>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 560 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 661
           D +  P++ P T     T   P VT R +RPPPP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 560 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPP 661
           D +  P++ P T     T   P VT R +RPPPP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711


>AC024845-4|AAK84623.2|  214|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.7 protein.
          Length = 214

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 714 PRFTPTGRRPQFTLQRVVFPITQQTFSVYRGPLPIPTQYSKRPC-AAGF 857
           PRF   GR P   L  V+F +    F +Y+    IP QY    C A GF
Sbjct: 18  PRFED-GRHPNVKLFVVIFALLGNIFMIYQSIRDIPRQYRSIICDAFGF 65


>Z81507-4|CAL49434.1|  598|Caenorhabditis elegans Hypothetical
           protein Y38F1A.10a protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = +2

Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706
           L++SE +   SP   P + +   L+T T   P +  R   PP P  L QR+         
Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236

Query: 707 XXXXVHSNGPAPPVHSSTG 763
                 SNG  PPV  S G
Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255


>DQ523832-1|ABF71877.1|  598|Caenorhabditis elegans P21-activated
           kinase MAX-2 protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = +2

Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706
           L++SE +   SP   P + +   L+T T   P +  R   PP P  L QR+         
Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236

Query: 707 XXXXVHSNGPAPPVHSSTG 763
                 SNG  PPV  S G
Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255


>AL032639-12|CAL49443.1|  598|Caenorhabditis elegans Hypothetical
           protein Y38F1A.10a protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
 Frame = +2

Query: 542 LTVSESDAFSSPLNSPLTHT---LRT-TRARPLVTYRGSRPPPPNTL-QRAAPLXXXXXX 706
           L++SE +   SP   P + +   L+T T   P +  R   PP P  L QR+         
Sbjct: 177 LSLSERNNVPSPAPVPYSESAPQLKTFTGETPKLHPRSPFPPQPPVLPQRSKTASAVATT 236

Query: 707 XXXXVHSNGPAPPVHSSTG 763
                 SNG  PPV  S G
Sbjct: 237 TTNPTTSNGAPPPVPGSKG 255


>Z81583-2|CAB04670.1|  314|Caenorhabditis elegans Hypothetical
           protein T02G6.2 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 545 TVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQ 673
           T + ++  S  L     HT+R+T   P+V     RP PP+ ++
Sbjct: 148 TANSANGVSLTLPRVKNHTIRSTDTVPIVRVPAGRPRPPSKIE 190


>AC024801-11|AAN84814.2|  138|Caenorhabditis elegans Hypothetical
           protein Y50D7A.10 protein.
          Length = 138

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +1

Query: 337 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 516
           C+  S+      + L+ +CP+ +  + +MLY+ S + +      V K  +  D+ E   E
Sbjct: 74  CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132

Query: 517 AVEEK 531
            +E K
Sbjct: 133 LLESK 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,136,282
Number of Sequences: 27780
Number of extensions: 517293
Number of successful extensions: 1793
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1783
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4329178048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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