Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030712_A03_e113_01.seq
(1504 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 109 4e-24
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 108 8e-24
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 107 2e-23
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 106 3e-23
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 106 4e-23
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 105 6e-23
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 104 2e-22
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 101 9e-22
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 101 1e-21
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 100 3e-21
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 96 6e-20
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 89 7e-18
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 81 2e-15
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 68 1e-11
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 34 0.28
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 34 0.28
At5g49080.1 68418.m06074 proline-rich extensin-like family prote... 31 1.5
At4g08400.1 68417.m01388 proline-rich extensin-like family prote... 31 1.5
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 31 1.5
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 31 1.5
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 31 2.6
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 30 3.4
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 30 3.4
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 30 4.5
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 7.9
At5g06640.1 68418.m00750 proline-rich extensin-like family prote... 29 7.9
At4g08410.1 68417.m01390 proline-rich extensin-like family prote... 29 7.9
At1g78815.1 68414.m09187 expressed protein contains Pfam profile... 29 7.9
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 109 bits (263), Expect = 4e-24
Identities = 54/142 (38%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGG 288
ASG+ V D CK + E+K + HR++ + I + +KQ+ VE VG Y+ F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP--- 61
Query: 289 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 468
ECRY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G
Sbjct: 62 ADECRYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDG 116
Query: 469 VQKYIQATDLSEASQEAVEEKL 534
+Q +QATD +E + ++ ++
Sbjct: 117 IQVELQATDPTEMDLDVLKSRV 138
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 108 bits (260), Expect = 8e-24
Identities = 55/143 (38%), Positives = 88/143 (61%), Gaps = 2/143 (1%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRDEK--QIDVETVGGRNAEYDSFLEDLQKG 285
ASG+ V+D CK + E+K + +R++ F I DEK Q+ +E +G YD F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIPDD 63
Query: 286 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 465
ECRY ++DF++T T + +K K+F ++W PDT++V+ KMLY+SS D K+ +
Sbjct: 64 ---ECRYAVYDFDFT-----TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREME 115
Query: 466 GVQKYIQATDLSEASQEAVEEKL 534
G+Q +QATD SE S + ++ +L
Sbjct: 116 GIQVELQATDPSEMSLDIIKGRL 138
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 107 bits (257), Expect = 2e-23
Identities = 54/140 (38%), Positives = 86/140 (61%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGT 291
ASG+ V D CK + E+K + +R++ F I D +Q+ VE +G YD F L
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLPPN-- 61
Query: 292 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 471
ECRY ++DF++T T+E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+
Sbjct: 62 -ECRYAVYDFDFT-----TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGI 115
Query: 472 QKYIQATDLSEASQEAVEEK 531
Q +QATD SE S + ++ +
Sbjct: 116 QVELQATDPSEMSLDIIKSR 135
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 106 bits (255), Expect = 3e-23
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGG 288
ASG+ V D CK + E+K + HR++ + I + +KQ+ VE VG Y+ F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61
Query: 289 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 468
ECRY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G
Sbjct: 62 ADECRYAIYDFDFV-----TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDG 116
Query: 469 VQKYIQATDLSE 504
+Q +QATD +E
Sbjct: 117 IQVELQATDPTE 128
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 106 bits (254), Expect = 4e-23
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
Frame = +1
Query: 115 SGVTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGGT 291
SG+ V+D KTT+ E+++ K HRYV F I + +K++ VE G YD FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN-- 70
Query: 292 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 471
+CRY ++DF++ TSE +K K+F +W P T+ ++ K+LYS+S D L + L G+
Sbjct: 71 -DCRYAVYDFDFV-----TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGI 124
Query: 472 QKYIQATDLSEASQEAVEEK 531
IQATD +E E + E+
Sbjct: 125 HYEIQATDPTEVDLEVLRER 144
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 105 bits (253), Expect = 6e-23
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRDEK--QIDVETVGGRNAEYDSFLEDLQKG 285
ASG+ VSD CK + E+K + +R++ F I DEK Q+ ++ +G Y+ F + +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPED 63
Query: 286 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 465
ECRY ++D+++T T E +K K+F ++W PDT++V+ KMLY+SS D K+ L
Sbjct: 64 ---ECRYAVYDYDFT-----TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELD 115
Query: 466 GVQKYIQATDLSEASQEAVEEKL 534
G+Q +QATD SE S + ++ ++
Sbjct: 116 GIQVELQATDPSEMSLDIIKGRV 138
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 104 bits (249), Expect = 2e-22
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +1
Query: 121 VTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGGTGE 297
+ V D CK + E+K + HR++ + I + +KQ+ VE VG Y+ F L E
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADE 57
Query: 298 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 477
CRY ++DF++ T+E +K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q
Sbjct: 58 CRYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQV 112
Query: 478 YIQATDLSEASQEAVEEKL 534
+QATD +E + ++ ++
Sbjct: 113 ELQATDPTEMDLDVLKSRV 131
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 101 bits (243), Expect = 9e-22
Identities = 51/137 (37%), Positives = 82/137 (59%)
Frame = +1
Query: 121 VTVSDACKTTYEEIKKDKKHRYVXFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGEC 300
+ V D CK + E+K + +R++ F I D +Q+ VE +G + YD F L EC
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANEC 56
Query: 301 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 480
RY +FDF++ T E +K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q
Sbjct: 57 RYAVFDFDFI-----TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 111
Query: 481 IQATDLSEASQEAVEEK 531
+QATD SE S + ++ +
Sbjct: 112 LQATDPSEMSFDIIKSR 128
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 101 bits (242), Expect = 1e-21
Identities = 53/140 (37%), Positives = 81/140 (57%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGT 291
ASG+ V D CK + E+K + R + + I D KQ+ VE +G YD F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---A 60
Query: 292 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 471
+CRY ++DF++ T+E +K K+F ++W PDTAKV+ KM+Y+SS D K+ L G+
Sbjct: 61 DDCRYCIYDFDFV-----TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGI 115
Query: 472 QKYIQATDLSEASQEAVEEK 531
Q +QATD +E + + +
Sbjct: 116 QVELQATDPTEMGLDVFKSR 135
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 100 bits (239), Expect = 3e-21
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGG 288
ASG+ V D CK + E+K + HR++ + I + +KQ+ VE +G ++ L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 289 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 468
ECRY +FDF++ +SE + ++F ++W PDTA+V+ KM+Y+SS D K+ L G
Sbjct: 62 ADECRYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDG 116
Query: 469 VQKYIQATDLSEASQEAVEEK 531
+Q +QATD +E + + +
Sbjct: 117 IQVELQATDPTEMDLDVFKSR 137
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 95.9 bits (228), Expect = 6e-20
Identities = 46/146 (31%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Frame = +1
Query: 106 KMAS-GVTVSDACKTTYEEIKKDKKHRYVXFYIRDE-KQIDVETVGGRNAEYDSFLEDLQ 279
KMA+ G+ V+D C +++ ++K K HRY+ F I ++ +++ V+ VGG Y + L
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP 65
Query: 280 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 459
+CRY +FDF++ T + +K K+F ++W P+ +K++ K+LY++S D L++
Sbjct: 66 ---VDDCRYAVFDFDFV-----TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRV 117
Query: 460 LVGVQKYIQATDLSEASQEAVEEKLR 537
L G+ +QATD +E + ++++ +
Sbjct: 118 LEGIHYELQATDPTEMGFDIIQDRAK 143
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 89.0 bits (211), Expect = 7e-18
Identities = 41/138 (29%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 127 VSDACKTTYEEIKKDKKHRYVXFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGTGECR 303
++D CK ++ E+K K HRYV + + ++ +++ V+ VG YD L + +CR
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED---DCR 57
Query: 304 YGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYI 483
Y +FDF+Y T + + K+F ++W P+ +++++KM+Y++S L++ L GV +
Sbjct: 58 YAVFDFDYV-----TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYEL 112
Query: 484 QATDLSEASQEAVEEKLR 537
QATD +E + ++++ +
Sbjct: 113 QATDPTEMGFDKIQDRAK 130
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 81.0 bits (191), Expect = 2e-15
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Frame = +1
Query: 121 VTVSDACKTTYEEIKKDKKHRYVXFYIRDEKQIDVETV------GGRNAEYDSFLEDLQK 282
+ + D CK T+ E+K+ + R + + I D Q+ VE G R Y+ F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP- 59
Query: 283 GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 462
ECRY + D E+ ++K+ ++W P TAK++KKM+YSS+ D K+ L
Sbjct: 60 --ADECRYAILDIEFV---------PGERKICFIAWSPSTAKMRKKMIYSSTKDRFKREL 108
Query: 463 VGVQKYIQATDLSEASQEAVEEKL 534
G+Q ATDL++ S +A+ ++
Sbjct: 109 DGIQVEFHATDLTDISLDAIRRRI 132
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 68.1 bits (159), Expect = 1e-11
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 ASGVTVSDACKTTYEEIKKDKKHRYVXFYIRD-EKQIDVETVGGRNAEYDSFLEDLQKGG 288
ASG+ V D CK + E+K + HR++ + I + +KQ+ VE +G ++ L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 289 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 468
ECRY +FDF++ +SE + ++F ++W PDTA+ + L G
Sbjct: 62 ADECRYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTAR---------------RELDG 101
Query: 469 VQKYIQATDLSEASQEAVEEK 531
+Q +QATD +E + + +
Sbjct: 102 IQVELQATDPTEMDLDVFKSR 122
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 33.9 bits (74), Expect = 0.28
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 456 ISRRRTEVHTGDRPLGGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGP--- 626
+S RR + R G RRG+TP +P PS+PP RY RG
Sbjct: 232 LSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPR-RYRSPPRGSPRR 290
Query: 627 LSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPQFTLQR 761
+ + VR RR P+ R P + + PR +P RR + ++R
Sbjct: 291 IRGSPVR-RRSPLPLRRRSPPPR-RLRSPPRRSPIRRRSRSPIRR 333
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 33.9 bits (74), Expect = 0.28
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 456 ISRRRTEVHTGDRPLGGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGP--- 626
+S RR + R G RRG+TP +P PS+PP RY RG
Sbjct: 239 LSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPR-RYRSPPRGSPRR 297
Query: 627 LSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPQFTLQR 761
+ + VR RR P+ R P + + PR +P RR + ++R
Sbjct: 298 IRGSPVR-RRSPLPLRRRSPPPR-RLRSPPRRSPIRRRSRSPIRR 340
>At5g49080.1 68418.m06074 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 609
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
Y+ +PY++ SP PP+ S K++Y + PP V +S
Sbjct: 45 YTPHSKPYIYNSPPPPYYSPSPKVNYKSPPPPYVYSS 81
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTV 228
Y PY++S P PP+ S K++Y +L PP V
Sbjct: 570 YKSPPPPYVYSSPPPPYYSPSPKVTYKSLPPPYV 603
>At4g08400.1 68417.m01388 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 513
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 326 YSKSKRPYLHSPVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY SP PP+ S K+ Y + PP V +S
Sbjct: 255 YKSPPPPYYRSPPPPYYSPSPKVDYKSPPPPYVYSS 290
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++ SP PP+ S K++Y PP V +S
Sbjct: 404 YKSPPPPYIYNSPPPPYYSPSPKVNYKTPPPPYVYSS 440
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 326 YSKSKRPYLHSPVPPFCRSSRKLSYSALRPPTVSTS 219
YS S + Y SP PP+ S K+ Y + PP V +S
Sbjct: 535 YSPSPKVYYKSPPPPYYSPSPKVYYKSPPPPYVYSS 570
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY S PY++S P PP+ S K+ Y + PP V +S
Sbjct: 651 VYKSSPPPYVYSSPPPPYHSPSPKVHYKSPPPPYVYSS 688
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 209 VYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 246
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 259 VYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 296
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 409 VYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 446
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 459 VYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 496
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 851 VYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 888
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 384 VYKSPPPPYVYSSPPPPYYTPSPKVVYKSPPPPYVYSS 421
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 534 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 571
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 559 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 596
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 726 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 763
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 751 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 788
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 776 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 813
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 801 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 838
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K+ Y + PP V +S
Sbjct: 826 VYKSPPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 863
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ + K+ Y + PP V +S
Sbjct: 309 VYKSPPPPYVYSSPPPPYYSPTPKVDYKSPPPPYVYSS 346
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++ SP PP+ S K SY + PP V +S
Sbjct: 403 VYKSPPPPYIYNSPPPPYYSPSPKPSYKSPPPPYVYSS 440
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S KL+Y + PP V +S
Sbjct: 429 YKSPPPPYVYSSPPPPYYSPSPKLTYKSSPPPYVYSS 465
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y S PY++S P PP+ S K+ Y + PP V +S
Sbjct: 454 YKSSPPPYVYSSPPPPYYSPSPKVVYKSPPPPYVYSS 490
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K SY + PP V S
Sbjct: 478 VYKSPPPPYVYSSPPPPYYSPSPKPSYKSPPPPYVYNS 515
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++S P PP+ S K +Y + PP V +S
Sbjct: 228 VYKSPPPPYVYSSPPPPYYSPSPKPAYKSPPPPYVYSS 265
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++ SP PP+ S K +Y + PP V +S
Sbjct: 328 VYKSPPPPYVYNSPPPPYYSPSPKPAYKSPPPPYVYSS 365
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 329 VYSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
VY PY++ SP PP+ S K +Y + PP V +S
Sbjct: 605 VYKSPPPPYVYNSPPPPYYSPSPKPTYKSPPPPYVYSS 642
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y+ +PY++S P PP+ S K++Y + PP V S
Sbjct: 51 YAPHPKPYVYSSPPPPYYTPSPKVNYKSPPPPYVYNS 87
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 30.3 bits (65), Expect = 3.4
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 540 H*PSVNPMHLALPSTPPS-HTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAP 716
H + N + LALP PP +T E+ + LS T+ PP S+ P A +D
Sbjct: 406 HNAASNALALALPDPPPPVNTTKEQDMIDLLSITLCTPSTPPAPSSQPSPPPPAGSDQNT 465
Query: 717 RFTPTGRRPQFTLQRVVFPITQQ 785
P +PQ V P QQ
Sbjct: 466 HIYP---QPQPRFDSYVAPWAQQ 485
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -3
Query: 329 VYSKSKRPYLHS--PVPPFCRSSRKLSYSALRPPTVSTS 219
+Y+ PY++S P PP+ S K+ Y + PP V +S
Sbjct: 146 IYNSPPPPYIYSSPPPPPYYSPSPKVDYKSPPPPYVYSS 184
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYL-HSPVPPFCRSSRKLSYSALRPPTVSTS 219
Y+ +PYL +SP PP+ S K Y + PP V S
Sbjct: 70 YTPHPKPYLFNSPPPPYYSPSPKEDYKSPPPPYVYNS 106
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
Y S PY++ SP PP+ S K+ Y + PP V S
Sbjct: 195 YKFSPPPYVYNSPSPPYYSPSPKVDYKSPPPPYVYNS 231
>At5g06640.1 68418.m00750 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 689
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLH-SPVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++ SP PP+ S K+ Y + PP V +S
Sbjct: 175 YKSPPPPYVYNSPPPPYYSPSPKIEYKSPPPPYVYSS 211
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -3
Query: 329 VYSKSKRP-YLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
VY KS P Y++S P PP+ S K+ Y + PP V +S
Sbjct: 323 VYYKSPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSS 361
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S K++Y + PP V +S
Sbjct: 400 YKSPPPPYVYSSPPPPYYSPSPKVAYKSPPPPYVYSS 436
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S K++Y + PP V +S
Sbjct: 550 YKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSS 586
>At4g08410.1 68417.m01390 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 707
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S K++Y + PP V +S
Sbjct: 523 YKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSS 559
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S K+ Y + PP V +S
Sbjct: 573 YKSPPPPYIYSSPPPPYYAPSPKVDYKSPPPPYVYSS 609
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 326 YSKSKRPYLHS-PVPPFCRSSRKLSYSALRPPTVSTS 219
Y PY++S P PP+ S K++Y + PP V +S
Sbjct: 623 YKSPPPPYVYSSPPPPYYSPSPKVNYKSPPPPYVYSS 659
>At1g78815.1 68414.m09187 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 195
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 504 GVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSH--TVVRDRRPPIH 668
G+A G P+ P P P PP+ +RYE + R + +R+++PP+H
Sbjct: 10 GIAEG--SSQPQSQPQPQPHQPQSPPNPPALSRYESQKRRDWNTFCQYLRNQQPPVH 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,542,878
Number of Sequences: 28952
Number of extensions: 473760
Number of successful extensions: 1797
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4009654272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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