Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_A02_e105_02.seq
         (1389 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   4.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   5.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   5.4  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 579 FHFSVKVNSKQIFCTREELFCTILEEKFEGVIINIDLILKSFT 707
           FHFS+      IF    +    +L+E+     IN++  +  FT
Sbjct: 141 FHFSILQQFVAIFNEETDKLVEVLKEECYKPFINVNAHVAQFT 183


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 157 YTNLFSKYKTYFXKRTKDAHKVTFE 83
           Y +  S    YF  +T D H ++FE
Sbjct: 560 YIDESSNSSNYFANKTYDFHNMSFE 584


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 579 FHFSVKVNSKQIFCTREELFCTILEEKFEGVIINIDLILKSFT 707
           FHFS+      IF    +    +L+E+     +N++  +  FT
Sbjct: 141 FHFSILQQFVAIFNEETDKLVEVLKEECYKPFVNVNAHVAQFT 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,194
Number of Sequences: 336
Number of extensions: 4306
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 41412683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)