Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030712_A01_e097_01.seq
         (1414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   3.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   3.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   5.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   9.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   9.5  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +3

Query: 735 PLSPAGVIAKRPAPIALPNSCA 800
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 432 PSVTSRKTIFGTGSEWWLLHMTHMSFATSTSMLIATMKTT 551
           P+ T ++T +     W+L H       T+T  L    +TT
Sbjct: 220 PTFTQQQTQYSQYGSWFLPHQPIYPAVTATVQLSTCTRTT 259


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 581 NYFIYKQLNPRCLHCRYQ 528
           N  I K+   RC +CRYQ
Sbjct: 127 NCIIDKRQRNRCQYCRYQ 144


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 741 SPAGVIAKRPAPIALPNSCA 800
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -2

Query: 207 LPRILPPFTPFLPVFWC--NWPFFATGXLCNCHXWQ 106
           +PR+L  F  F+       NW FF    L N   W+
Sbjct: 223 VPRVLMYFDIFITEHESKPNWLFFLANFLTNLLFWE 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,045
Number of Sequences: 336
Number of extensions: 4948
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 41994250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)