Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H12_e96_16.seq
(1488 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 38 0.071
AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein. 38 0.071
U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein. 33 2.0
D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein. 33 2.0
AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein ... 33 2.0
AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone recepto... 33 2.0
AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein ... 33 2.0
AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein. 33 2.0
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 33 2.7
AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive dom... 33 2.7
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 33 2.7
AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-ty... 33 2.7
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 33 2.7
AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive dom... 33 2.7
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 33 2.7
AK093501-1|BAC04186.1| 522|Homo sapiens protein ( Homo sapiens ... 33 2.7
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 33 2.7
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 33 2.7
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 33 2.7
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 33 2.7
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 33 2.7
AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein ... 33 2.7
AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein. 33 2.7
AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein pro... 33 2.7
AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein. 33 2.7
AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein. 33 2.7
BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14... 32 6.2
AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens ... 32 6.2
AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein. 32 6.2
AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing pr... 32 6.2
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 38.3 bits (85), Expect = 0.071
Identities = 32/115 (27%), Positives = 49/115 (42%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMA 399
W P S +T P + NVSP + ++H ++ +PQ+S VP ++ MA
Sbjct: 865 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 917
Query: 400 PIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQPS 564
P+ + G+ L PVS Q P P + L S AGP + P+
Sbjct: 918 PMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTAPQQGLPGLSPAGPELGAFSQSPA 972
>AF221759-1|AAF34658.1| 893|Homo sapiens Mam1 protein.
Length = 893
Score = 38.3 bits (85), Expect = 0.071
Identities = 32/115 (27%), Positives = 49/115 (42%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMA 399
W P S +T P + NVSP + ++H ++ +PQ+S VP ++ MA
Sbjct: 716 WQHQGMPNLSGQT---PGNSNVSPFTAASSFHMQQQAH--LKMSSPQFSQA-VP-NRPMA 768
Query: 400 PIPISIPAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGPYVAQTYSQPS 564
P+ + G+ L PVS Q P P + L S AGP + P+
Sbjct: 769 PMSSAAAVGSLLPPVSAQQRTSAPAPAPPPTAPQQGLPGLSPAGPELGAFSQSPA 823
>U80742-1|AAB91440.1| 652|Homo sapiens CAGH45 protein.
Length = 652
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 440 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 499
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 500 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 533
>D83783-1|BAA12112.1| 2124|Homo sapiens KIAA0192 protein.
Length = 2124
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 1912 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1971
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1972 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 2005
>AF132033-1|AAD44162.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 1811 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1870
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1871 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1904
>AF117755-1|AAD22033.1| 2212|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP230
protein.
Length = 2212
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 2000 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 2059
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 2060 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 2093
>AF071309-1|AAC83163.1| 2023|Homo sapiens OPA-containing protein
protein.
Length = 2023
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 1811 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1870
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1871 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1904
>AB102668-1|BAC81137.1| 2027|Homo sapiens TNRC11 protein.
Length = 2027
Score = 33.5 bits (73), Expect = 2.0
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 238 PPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISI 417
PPS Q P+ +PT+ + QAP Y H +
Sbjct: 1815 PPSYSSQPYQSTHPSTNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQT 1874
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQ 519
P +++TP+S Q VQ + PE+ ++ Q+Q
Sbjct: 1875 PMISTMTPMSAQGVQAGVRSTAILPEQQQQQQQQ 1908
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Query: 568 TVSQPVA 588
SQ A
Sbjct: 585 QQSQQTA 591
>AL512408-2|CAI23483.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 661 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 715
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 716 ESYYPVAPHPTQ 727
>AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 622 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 676
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 677 ESYYPVAPHPTQ 688
>AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 661 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 715
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 716 ESYYPVAPHPTQ 727
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Query: 568 TVSQPVA 588
SQ A
Sbjct: 585 QQSQQTA 591
>AL034380-7|CAI21622.1| 1175|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1175
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AK093501-1|BAC04186.1| 522|Homo sapiens protein ( Homo sapiens
cDNA FLJ36182 fis, clone TESTI2026824, weakly similar to
Homo sapiens membrane-associated nucleic acid binding
protein ).
Length = 522
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 50 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 104
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 105 ESYYPVAPHPTQ 116
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA1 protein.
Length = 1999
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 185 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 243
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 244 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 298
Query: 568 TVSQPVA 588
SQ A
Sbjct: 299 QQSQQTA 305
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein
p270 protein.
Length = 1927
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 113 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 171
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 172 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 226
Query: 568 TVSQPVA 588
SQ A
Sbjct: 227 QQSQQTA 233
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor
250a protein.
Length = 2285
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 471 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 529
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 530 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 584
Query: 568 TVSQPVA 588
SQ A
Sbjct: 585 QQSQQTA 591
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling
factor p250 protein.
Length = 1939
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 183
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 184 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 238
Query: 568 TVSQPVA 588
SQ A
Sbjct: 239 QQSQQTA 245
>AB210022-1|BAE06104.1| 1374|Homo sapiens ARID1A variant protein
protein.
Length = 1374
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 125 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 183
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 184 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 238
Query: 568 TVSQPVA 588
SQ A
Sbjct: 239 QQSQQTA 245
>AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein.
Length = 1109
Score = 33.1 bits (72), Expect = 2.7
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 298 RYQYMY-SPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGA--SLTPVSLQHVQLV 468
+Y +Y S Y+ + Y AP Y+ E+ +PIPI IP A S P S + Q +
Sbjct: 637 QYPPIYPSHYDGRRVYP--APSYTREEI---FRESPIPIEIPPAAVPSYVPESRERYQQI 691
Query: 469 PCMCPVAPEEAE 504
PVAP +
Sbjct: 692 ESYYPVAPHPTQ 703
>AB051293-1|BAB55599.1| 1208|Homo sapiens SWI related protein
protein.
Length = 1208
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AB024075-1|BAA83073.1| 1119|Homo sapiens B120 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>AB001895-1|BAA23269.1| 1142|Homo sapiens B120 protein.
Length = 1142
Score = 33.1 bits (72), Expect = 2.7
Identities = 36/127 (28%), Positives = 47/127 (37%), Gaps = 4/127 (3%)
Frame = +1
Query: 220 WGSDSAPPSSQKTWVQPLSPNVSPTIRYQYMYSPYESHKTYQLQAPQYS-HPEVPIHQNM 396
+ S P Q+ P+ +P + Y P Q P YS P P HQ
Sbjct: 88 YNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ-Q 146
Query: 397 APIPISIPAGASLTPVSLQHVQLVPCMC-PVAPEEAEKLQEQSGAGPYVAQ--TYSQPSY 567
+P P P+ S T QH Q P P A ++ Q Q A ++Q Y QP
Sbjct: 147 SPAP--YPSQQSTTQ---QHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQS 201
Query: 568 TVSQPVA 588
SQ A
Sbjct: 202 QQSQQTA 208
>BC052311-1|AAH52311.1| 571|Homo sapiens PR domain containing 14
protein.
Length = 571
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 534
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
>AK022595-1|BAB14120.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ12533 fis, clone NT2RM4000202, weakly similar to
ZINC FINGER PROTEIN MOK-2. ).
Length = 571
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 534
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
>AJ009794-1|CAA08833.1| 362|Homo sapiens hug-1 protein.
Length = 362
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 313 YSPYESHKTYQLQAPQYSHPEVPIHQNMAPIPISIPAGASLTPVSLQH 456
+SPY+SH + S P VP+H ++ P P LT + L H
Sbjct: 66 WSPYKSHPCVTTNSSNNSCPAVPVHFTISTPPSIPPHWQGLTALVLLH 113
>AF319458-1|AAG39635.1| 571|Homo sapiens PR-domain containing
protein 14 protein.
Length = 571
Score = 31.9 bits (69), Expect = 6.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 418 PAGASLTPVSLQHVQLVPCMCPVAPEEAEKLQEQSGAGP 534
PA ASL P L+ QL+PC E+ K Q G P
Sbjct: 154 PADASLLPEGLRTSQLLPCSPSKQSEDGPKPSNQEGKSP 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,542,390
Number of Sequences: 237096
Number of extensions: 2882339
Number of successful extensions: 6063
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6063
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22033271868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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