BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H11_e88_15.seq
(1515 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 25 7.6
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 24.6 bits (51), Expect = 7.6
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Frame = +3
Query: 171 VMEENSRKSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQ- 347
V E+N R+ VK+ V R Q+ ALS GF I++++ P E I
Sbjct: 688 VTEDNKREYVKLYVNYRFMRGIEQQFLALS---KGFGELILSHL-LRPFDERELELLISG 743
Query: 348 ISKLHPLDYNKGPQLLQYVAKT-----IWQSISLLLTLFIS 455
ISK+ D+ +L Q A T WQ S L L +S
Sbjct: 744 ISKIDVNDWKANTRLKQCTADTPQIVWFWQVSSTDLQLSMS 784
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,243,190
Number of Sequences: 2352
Number of extensions: 24089
Number of successful extensions: 76
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177594615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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