Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_H11_e88_15.seq
         (1515 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked glyco...   159   2e-38
BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked glyco...   159   2e-38
AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase pro...   159   2e-38
AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.             159   2e-38
AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4 mannosyltransf...   159   2e-38

>BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score =  159 bits (387), Expect = 2e-38
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
 Frame = +3

Query: 192 KSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPLD 371
           + V  VVL D+GRSPRMQYHALSLA +GF V ++ +  + P  E+ +N  IQI  L  L 
Sbjct: 33  RHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQ 92

Query: 372 -YNKGPQLLQYVAKTIWQSISLLLTLFISGKCHYLLCQNPPAIPTLPICSVYCLVARVQL 548
               GP++ QY  K + Q++ LL  L       Y+  QNPP +P++ +C     +   +L
Sbjct: 93  SLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKL 152

Query: 549 IIDWHNYGYSLMAMSLHRDHLLVLXATHIEKLFGQYAHHNFLCHLCMKEDLLQNWNIVAT 728
           +IDWHNYGYS+M +    +H LVL A   EK FG+ +H N      M+EDL  NW+I A 
Sbjct: 153 VIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAV 212

Query: 729 TLYDRP 746
           T+YD+P
Sbjct: 213 TVYDKP 218


>BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score =  159 bits (387), Expect = 2e-38
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
 Frame = +3

Query: 192 KSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPLD 371
           + V  VVL D+GRSPRMQYHALSLA +GF V ++ +  + P  E+ +N  IQI  L  L 
Sbjct: 33  RHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQ 92

Query: 372 -YNKGPQLLQYVAKTIWQSISLLLTLFISGKCHYLLCQNPPAIPTLPICSVYCLVARVQL 548
               GP++ QY  K + Q++ LL  L       Y+  QNPP +P++ +C     +   +L
Sbjct: 93  SLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKL 152

Query: 549 IIDWHNYGYSLMAMSLHRDHLLVLXATHIEKLFGQYAHHNFLCHLCMKEDLLQNWNIVAT 728
           +IDWHNYGYS+M +    +H LVL A   EK FG+ +H N      M+EDL  NW+I A 
Sbjct: 153 VIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAV 212

Query: 729 TLYDRP 746
           T+YD+P
Sbjct: 213 TVYDKP 218


>AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase
           protein.
          Length = 472

 Score =  159 bits (387), Expect = 2e-38
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
 Frame = +3

Query: 192 KSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPLD 371
           + V  VVL D+GRSPRMQYHALSLA +GF V ++ +  + P  E+ +N  IQI  L  L 
Sbjct: 41  RHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQ 100

Query: 372 -YNKGPQLLQYVAKTIWQSISLLLTLFISGKCHYLLCQNPPAIPTLPICSVYCLVARVQL 548
               GP++ QY  K + Q++ LL  L       Y+  QNPP +P++ +C     +   +L
Sbjct: 101 SLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKL 160

Query: 549 IIDWHNYGYSLMAMSLHRDHLLVLXATHIEKLFGQYAHHNFLCHLCMKEDLLQNWNIVAT 728
           +IDWHNYGYS+M +    +H LVL A   EK FG+ +H N      M+EDL  NW+I A 
Sbjct: 161 VIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAV 220

Query: 729 TLYDRP 746
           T+YD+P
Sbjct: 221 TVYDKP 226


>AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.
          Length = 464

 Score =  159 bits (387), Expect = 2e-38
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
 Frame = +3

Query: 192 KSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPLD 371
           + V  VVL D+GRSPRMQYHALSLA +GF V ++ +  + P  E+ +N  IQI  L  L 
Sbjct: 33  RHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQ 92

Query: 372 -YNKGPQLLQYVAKTIWQSISLLLTLFISGKCHYLLCQNPPAIPTLPICSVYCLVARVQL 548
               GP++ QY  K + Q++ LL  L       Y+  QNPP +P++ +C     +   +L
Sbjct: 93  SLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKL 152

Query: 549 IIDWHNYGYSLMAMSLHRDHLLVLXATHIEKLFGQYAHHNFLCHLCMKEDLLQNWNIVAT 728
           +IDWHNYGYS+M +    +H LVL A   EK FG+ +H N      M+EDL  NW+I A 
Sbjct: 153 VIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAV 212

Query: 729 TLYDRP 746
           T+YD+P
Sbjct: 213 TVYDKP 218


>AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4
           mannosyltransferase protein.
          Length = 464

 Score =  159 bits (387), Expect = 2e-38
 Identities = 80/186 (43%), Positives = 111/186 (59%), Gaps = 1/186 (0%)
 Frame = +3

Query: 192 KSVKVVVLADIGRSPRMQYHALSLANNGFKVNIITYVETTPLTEITENPNIQISKLHPLD 371
           + V  VVL D+GRSPRMQYHALSLA +GF V ++ +  + P  E+ +N  IQI  L  L 
Sbjct: 33  RHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQ 92

Query: 372 -YNKGPQLLQYVAKTIWQSISLLLTLFISGKCHYLLCQNPPAIPTLPICSVYCLVARVQL 548
               GP++ QY  K + Q++ LL  L       Y+  QNPP +P++ +C     +   +L
Sbjct: 93  SLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKL 152

Query: 549 IIDWHNYGYSLMAMSLHRDHLLVLXATHIEKLFGQYAHHNFLCHLCMKEDLLQNWNIVAT 728
           +IDWHNYGYS+M +    +H LVL A   EK FG+ +H N      M+EDL  NW+I A 
Sbjct: 153 VIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAV 212

Query: 729 TLYDRP 746
           T+YD+P
Sbjct: 213 TVYDKP 218


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,715,230
Number of Sequences: 237096
Number of extensions: 3841145
Number of successful extensions: 5481
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5475
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22526554074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)