Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H10_e80_16.seq
(1533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 26 0.74
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 32 0.94
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 25 2.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 25 2.4
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 27 2.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 26 3.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 23 4.6
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 25 5.5
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 29 6.6
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 8.7
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 25.8 bits (54), Expect(2) = 0.74
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 102 PPPPPPAPXXPXS 64
PPPPPPA P S
Sbjct: 173 PPPPPPAQQKPSS 185
Score = 25.4 bits (53), Expect(2) = 0.74
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 141 STALHMS*XXSXXPPPPPPAP 79
S+ H S PPPPPP P
Sbjct: 143 SSFSHHGATSSAPPPPPPPPP 163
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 102 PPPPPPAPXXPXS 64
PPPPPP P S
Sbjct: 157 PPPPPPPVSVPSS 169
Score = 23.4 bits (48), Expect(2) = 9.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PP PPPAP
Sbjct: 118 SSAPPVPPPAP 128
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 32.3 bits (70), Expect = 0.94
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -1
Query: 495 NNGIYVIRMYFNFPFIICVLILYYSI-PIWLKLDHVLQSLGRHYGYLVQL*KKNRKEIL* 319
+NG Y+ R++ ++IC LI++ I ++ R Y+ + K+ K++L
Sbjct: 186 SNGKYIFRIFDAISYLICSLIIFICFSTICFCTSQIMMKQKRQQQYMSEKTKEMNKQLLK 245
Query: 318 RMLFKXXXXXXXXXXRPGAVAT 253
M+F+ G V T
Sbjct: 246 TMIFQTIFPFFMMYITVGVVLT 267
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.5 bits (68), Expect = 1.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 102 PPPPPPAPXXPXSC 61
PPPPPPAP P C
Sbjct: 145 PPPPPPAPEAPTQC 158
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 141 STALHMS*XXSXXPPPPPPAP 79
S+ H S PPPPPP P
Sbjct: 143 SSFSHHGATSSAPPPPPPPPP 163
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 102 PPPPPPAPXXP 70
PPPPPPA P
Sbjct: 173 PPPPPPAQQKP 183
Score = 23.8 bits (49), Expect(2) = 9.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 102 PPPPPPAPXXPXS 64
PPPPPP P S
Sbjct: 157 PPPPPPPVSVPSS 169
Score = 23.4 bits (48), Expect(2) = 9.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PP PPPAP
Sbjct: 118 SSAPPVPPPAP 128
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 102 PPPPPPAPXXPXS 64
PP PPPAP P S
Sbjct: 830 PPNPPPAPQPPSS 842
Score = 24.2 bits (50), Expect(2) = 2.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PPPPPP P
Sbjct: 823 STLPPPPPPNP 833
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 27.5 bits (58), Expect(2) = 2.8
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 102 PPPPPPAPXXP 70
PPPPPPAP P
Sbjct: 53 PPPPPPAPKVP 63
Score = 21.8 bits (44), Expect(2) = 2.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PPPPP P
Sbjct: 48 SSAEPPPPPPP 58
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 26.2 bits (55), Expect(2) = 3.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PPPPPPAP
Sbjct: 20 STPPPPPPPAP 30
Score = 22.6 bits (46), Expect(2) = 3.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 102 PPPPPPAPXXP 70
PPPPP P P
Sbjct: 24 PPPPPAPPALP 34
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 22.6 bits (46), Expect(3) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 102 PPPPPPA 82
PPPPPPA
Sbjct: 90 PPPPPPA 96
Score = 22.6 bits (46), Expect(3) = 4.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 96 PPPPAPXXP 70
PPPPAP P
Sbjct: 111 PPPPAPAAP 119
Score = 21.4 bits (43), Expect(3) = 4.6
Identities = 7/18 (38%), Positives = 7/18 (38%)
Frame = -1
Query: 90 PPAPXXPXSCXXRGXPXN 37
PP P P C P N
Sbjct: 154 PPPPSAPACCVAAPVPTN 171
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 111 SXXPPPPPPAP 79
S PPPPPP P
Sbjct: 751 SSTPPPPPPPP 761
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 102 PPPPPPAPXXP 70
PPPPPP P
Sbjct: 757 PPPPPPLAAAP 767
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 29.5 bits (63), Expect = 6.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 102 PPPPPPAPXXPXSCXXRGXP 43
PPPPPP P P + R P
Sbjct: 73 PPPPPPPPVLPSAASARQLP 92
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 29.1 bits (62), Expect = 8.7
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 158 HGPARRAQVRWLLRLGGVRETRGDSAPAGPRPVATAPG 271
HGPA A R GV GD P GP APG
Sbjct: 199 HGPAGPAGPRGTRHSAGVPGKPGDVGPCGPEGPKGAPG 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,038,212
Number of Sequences: 27780
Number of extensions: 343161
Number of successful extensions: 2360
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2024
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4411031650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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