Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_H08_e64_16.seq
         (1356 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...    35   0.30 
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...    35   0.30 

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 33/115 (28%), Positives = 43/115 (37%)
 Frame = +2

Query: 98  ATXVXXCKRGXGVSXXXNGRPLXLGXPXLVQXXXXXTYXXCXXRXRSGGVYXRGXVXXGX 277
           AT V  CKRG G+    NGRPL    P ++Q            + +  GV  R  V  G 
Sbjct: 21  ATAVAYCKRGNGL-LKVNGRPLEQIEPKVLQYKLQEPLLLLG-KEKFAGVDIRVRVSGGG 78

Query: 278 AXXHRXMXXNXXXLXXLSLXTLYMCPKHLXKXIXDILXXXDXSLLXXDPXXXXPK 442
                           ++    Y+  +   K I DIL   D +LL  DP    PK
Sbjct: 79  HVAQIYAIRQAISKALVAFYQKYV-DEASKKEIKDILVQYDRTLLVGDPRRCEPK 132



 Score = 30.7 bits (66), Expect = 4.8
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +1

Query: 271 GXXXVAQXYAXKXXXSXALIAXYLIYVPEAS 363
           G   VAQ YA +   S AL+A Y  YV EAS
Sbjct: 76  GGGHVAQIYAIRQAISKALVAFYQKYVDEAS 106


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 33/115 (28%), Positives = 43/115 (37%)
 Frame = +2

Query: 98  ATXVXXCKRGXGVSXXXNGRPLXLGXPXLVQXXXXXTYXXCXXRXRSGGVYXRGXVXXGX 277
           AT V  CKRG G+    NGRPL    P ++Q            + +  GV  R  V  G 
Sbjct: 21  ATAVAYCKRGNGL-LKVNGRPLEQIEPKVLQYKLQEPLLLLG-KEKFAGVDIRVRVSGGG 78

Query: 278 AXXHRXMXXNXXXLXXLSLXTLYMCPKHLXKXIXDILXXXDXSLLXXDPXXXXPK 442
                           ++    Y+  +   K I DIL   D +LL  DP    PK
Sbjct: 79  HVAQIYAIRQAISKALVAFYQKYV-DEASKKEIKDILVQYDRTLLVGDPRRCEPK 132



 Score = 30.7 bits (66), Expect = 4.8
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +1

Query: 271 GXXXVAQXYAXKXXXSXALIAXYLIYVPEAS 363
           G   VAQ YA +   S AL+A Y  YV EAS
Sbjct: 76  GGGHVAQIYAIRQAISKALVAFYQKYVDEAS 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,504,095
Number of Sequences: 53049
Number of extensions: 208100
Number of successful extensions: 103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7415810220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)