Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_H06_e48_16.seq
         (1471 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   5.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -2

Query: 225 INVL*DFNVDLYFFVVSEVESPIIGYVEVLLCSECG 118
           +N +  F+ + Y FV++  ++P   ++++    ECG
Sbjct: 382 VNTIISFSGERYDFVINADQTPGAYWIQLRGLGECG 417


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -2

Query: 225 INVL*DFNVDLYFFVVSEVESPIIGYVEVLLCSECG 118
           +N +  F+ + Y FV++  ++P   ++++    ECG
Sbjct: 382 VNTIISFSGERYDFVINADQTPGAYWIQLRGLGECG 417


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 207 FNVDLYFFVVSEVESPIIGYVEVLLCSEC 121
           +   +YF   +  ESPI   + V+L S C
Sbjct: 485 YRPSIYFISKTLAESPIFIIIPVILTSVC 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,344
Number of Sequences: 336
Number of extensions: 4848
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43940325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)