Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H04_e32_16.seq
(1480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 36 0.11
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 35 0.14
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 35 0.14
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 33 0.43
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 33 0.76
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 32 1.3
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 2.3
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 31 2.3
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 30 4.0
11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 29 7.1
02_04_0469 - 23178589-23178755,23179529-23179697,23179836-231799... 29 7.1
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 9.4
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 35.5 bits (78), Expect = 0.11
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = +1
Query: 292 ISNEVQILTNELNAASGKLSSINELADQALKR---AKVVYEEALGLYAEVNTTLLPDIK- 459
+ NEV ++ +L+S D+ KR A+ YE + L +E L K
Sbjct: 1070 LRNEVSEKVIQIEKLETELASSKRALDEQYKRWRSAQDNYERQVILQSETIQELTSASKE 1129
Query: 460 LRKLHEDSLGMNRTIDDKAADLD--RLIAENE--DTLKGLDEAIKRGRDLLEQGHDRQDE 627
L L ++ + + +T++ + A+ D R + E E + +KG DEA+++ +L +Q ++
Sbjct: 1130 LSSLQQEIIVLRQTVETQKAENDGLRTLGEQEKIELVKGKDEALQKYNELNDQNKILHNQ 1189
Query: 628 LNDL 639
L L
Sbjct: 1190 LEAL 1193
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 35.1 bits (77), Expect = 0.14
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 NSGNNPLICPH*PRSPDSXAEKLENEARNIRD-IADKAFNTSXVANKIAKDGITKQANIS 297
NS +N ICP+ P +PDS A ++ N+ D + D + + + + + ANI
Sbjct: 1042 NSADNDAICPNVPDAPDSDAANIDEILPNVDDALDDNSADNDAICPNVPDASDSNAANID 1101
Query: 298 NEVQILTNELNAASGKLSS 354
I N ++A+S S+
Sbjct: 1102 ---AIHPNVVDASSSNASN 1117
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 35.1 bits (77), Expect = 0.14
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 454 IKLRKLHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDL 597
+K+++ E S+ + + ++ K D R+ AENE+ +K +D + RD+
Sbjct: 281 VKIQEKEESSVHLEKELEAKLMDQQRIAAENEELMKKVDAQVVNVRDV 328
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 33.5 bits (73), Expect = 0.43
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Frame = +1
Query: 169 DSXAEKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGKL 348
D +KL ++ NI + ++ + + + K+ K + NE+ EL A L
Sbjct: 282 DDLEQKLASQDANISHLTEE-LSLHRSSEESLKE---KTLKLENELSSAHEELQAKILNL 337
Query: 349 SSIN-ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADL 525
+ +L +QA + K +E L E L ++ ++S G N T+ ADL
Sbjct: 338 QEMEIKLEEQA--KEKQTWEATLEKQQEQILNLQTEL------DESKGGNETLRGTIADL 389
Query: 526 DRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDEL 630
+ +AE + L+ ++ + + LL + +DEL
Sbjct: 390 NSKLAERDSLLRQAEDEHAKAQLLLSEALSHKDEL 424
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 32.7 bits (71), Expect = 0.76
Identities = 24/98 (24%), Positives = 49/98 (50%)
Frame = +1
Query: 325 LNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTI 504
L A KLSS+ + D A+ ++ + L + D + + L +S+ T
Sbjct: 319 LEEAEKKLSSLKKDFDPAVYKSLKEKLDETNLEISSMQKKIEDARAQDL--ESIATVSTE 376
Query: 505 DDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDR 618
D A ++ + +AE E +L+ L E++K+ + +++ HD+
Sbjct: 377 LDDAKEMLQKVAEEESSLRSLVESLKQELEAVKEEHDQ 414
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 31.9 bits (69), Expect = 1.3
Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Frame = +1
Query: 235 NTSXVANKIAKDGITKQANISNEVQILTNELNAASGKLSS---INELADQALKRAKVVYE 405
+T +K+A+ ++K NE++ ++ A + S+ + E +Q ++ +
Sbjct: 935 HTDLEKSKVAE--VSKLQAALNEMEQRMQDVTAMQERESAKKAVEEALEQEREKISSLTS 992
Query: 406 EALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKR 585
E GL A + + +K H ++ N + + D D I + DT++ L+E I+
Sbjct: 993 EIEGLKALLVAEQEENDLTKKAHANAQERNEELSKEVEDADGKIKQLSDTVQRLEETIQE 1052
Query: 586 GRDLLEQGHDRQDELNDLL 642
LL ++E + ++
Sbjct: 1053 REALLLAERQEKEEASAVI 1071
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 31.1 bits (67), Expect = 2.3
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Frame = +1
Query: 172 SXAEKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAA--SGK 345
S +LEN + ++ ++ + NKI K+ + +N+ EV LT +L++ +
Sbjct: 993 SLLSELENIFQEHKEHEERIDRVHLLLNKIEKEKTVELSNLEREVISLTAQLSSTEEERE 1052
Query: 346 LSSINELADQALKRAKVVYEEALGLYAEVNTTLLP-DIKLRKLHEDSLGMNRTIDDKAAD 522
S+++ + + ++ RA EA +VN ++ + +L L E + +D A
Sbjct: 1053 SSTLDTIREVSILRADKAKLEA--NLEDVNAQMIHYESQLEDLRESKTKIKDLVDSLNAS 1110
Query: 523 L--DRLIAENEDTLKGLDEAIKRGRDLLEQ 606
+ ++ + D ++ EA + D L +
Sbjct: 1111 KQNEEMLTTDVDNMRRSIEAARSNEDNLRK 1140
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 31.1 bits (67), Expect = 2.3
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Frame = +1
Query: 253 NKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEAL-GLYAE 429
+K AK I ++++ NE+N + + SS+ A Q L+RA+ EAL + AE
Sbjct: 182 HKRAKQRIQDIQKEKDDMEARFNEINQKAEQASSLQSAAQQELERARQQASEALRSMDAE 241
Query: 430 VNTTLLPDIKLR-KLHEDSLGM---NRTID---DKAADLDRLIAENEDTLKGLDEAIKRG 588
+ KLR L E + + N ++ + ++L+ + + +L+ +E KR
Sbjct: 242 RQQLRTVNSKLRTNLDEARVALEARNNVLEKLRQSMFEKEQLLEQTQASLQSAEE--KRN 299
Query: 589 RDLLEQGHDRQDELNDL 639
+ E Q +L L
Sbjct: 300 ASIAELTAKHQKQLESL 316
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 30.3 bits (65), Expect = 4.0
Identities = 35/138 (25%), Positives = 63/138 (45%)
Frame = +1
Query: 181 EKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSIN 360
++LENE R+ AD N +++ + KQA+ E++ NELN
Sbjct: 579 QRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASKERELEEKENELNRKM------- 631
Query: 361 ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIA 540
+ + LKRA + E +++ LL +L+K E + + ++ AD+ R I
Sbjct: 632 DFVENELKRAAELNE------SKIQKILLEKKQLQKEKEVLVEDRQKLETDKADIRRDI- 684
Query: 541 ENEDTLKGLDEAIKRGRD 594
D+L L +++K R+
Sbjct: 685 ---DSLNTLSKSLKERRE 699
>11_06_0553 -
24920428-24921057,24921149-24921276,24921372-24921409,
24921522-24921734,24921906-24921998,24922089-24922276,
24922396-24922502,24922614-24922775,24922870-24922953,
24923060-24923168,24923340-24923468,24923504-24923556,
24923654-24923759,24924082-24924189
Length = 715
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 511 KAADLDRLIAENEDTLKGLDEAIKRGRDLLEQ 606
+ A+LD+ I + E LK L+E IKR LE+
Sbjct: 515 RIAELDKEICDAEQELKDLNEQIKRAETSLEE 546
>02_04_0469 -
23178589-23178755,23179529-23179697,23179836-23179919,
23180495-23180647,23180798-23180950,23182488-23182589
Length = 275
Score = 29.5 bits (63), Expect = 7.1
Identities = 22/97 (22%), Positives = 43/97 (44%)
Frame = +1
Query: 247 VANKIAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYA 426
+ N+I D + K + + E + +E+NAA G+ S + + V E L A
Sbjct: 112 IQNEINIDDVQKLMDDTAEAKAYQDEINAALGEQLSAED--------EEAVMAEFENLEA 163
Query: 427 EVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLI 537
++ LPD + ++ + + + A D+D +I
Sbjct: 164 QLAVESLPDAPVTEVRPEEKSETPAVTEAAEDIDEVI 200
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 29.1 bits (62), Expect = 9.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 502 IDDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDL 639
+++K+ DL++++ E E LK L+ + + L D+ DEL+ L
Sbjct: 2333 LENKSNDLEKMLQEKEFALKSLEVSRTKALTKLATTVDKFDELHSL 2378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,716,213
Number of Sequences: 37544
Number of extensions: 367708
Number of successful extensions: 843
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4722057956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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