Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030623sawa_H04_e32_16.seq
(1480 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 39 0.009
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.036
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.11
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 33 0.58
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.77
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 33 0.77
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 32 1.0
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 31 1.8
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43) 31 2.3
SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16) 31 2.3
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 31 3.1
SB_58655| Best HMM Match : Flotillin (HMM E-Value=1.1) 30 4.1
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 30 4.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 5.4
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14) 30 5.4
SB_27931| Best HMM Match : Filament (HMM E-Value=0.028) 29 7.2
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_539| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 39.1 bits (87), Expect = 0.009
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +1
Query: 184 KLENEARNIRDIADKAFNTSX-VANKIAKDGITKQANISNEVQILTNELNAASGKLSSIN 360
K E D+ D+ N A ++A DG Q I+ + Q L NA KL +
Sbjct: 274 KKHEEFSKRMDVQDEKINQMIQFAQRLANDGHYAQDKITEKAQNLHERRNANRQKLEAAL 333
Query: 361 ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIA 540
+ AL+ + + ++A +Y +N K + E+S I K + A
Sbjct: 334 QRLRDALQLQQFI-QDAEDMYDWLNE------KHQVASEESYRDLSNIQGKVMKHEAFEA 386
Query: 541 ENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDLL 642
E + + LD+ + GRDL ++ + + E+++LL
Sbjct: 387 ELQANKERLDQISESGRDLADEKPENKPEIDELL 420
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 37.1 bits (82), Expect = 0.036
Identities = 28/143 (19%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Frame = +1
Query: 184 KLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINE 363
KL + R +++AD+ + + N A + + K +NE++ + ++ A+ I +
Sbjct: 1907 KLGSMDRKNKELADELSKSKNLENGKATEMVKKNEEKNNEIEEMREKMRKAN---EEIEK 1963
Query: 364 LADQALKRAKVVYEEALGLYAEVNTTLL----PDIKLRKLHEDSLGMNRTIDDKAADLDR 531
+ + K + ++ E G+ +N L P++KL+KL E + + +++ + ++
Sbjct: 1964 ILSKNSKLSDILNELNSGIENILNEETLSDSDPNVKLQKLREKFENLEKQVNNVKEEAEK 2023
Query: 532 LIAENEDTLKGLDEAIKRGRDLL 600
+ E +D L G + + D++
Sbjct: 2024 NVQE-KDQLTGFLHEVNQEMDVI 2045
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 35.5 bits (78), Expect = 0.11
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 5/169 (2%)
Frame = +1
Query: 163 SPDSXAEKLENEARNIRDIADKAFNTSXVANK----IAKDGITKQANISNEVQILTNELN 330
S ++ ++E R +D+A K ++ V + I D Q + S EV+ L +EL
Sbjct: 437 SVEAYERRIERLEREKKDLARKLQESTKVVREQSAMITNDPGNDQVD-SMEVKKLKDELL 495
Query: 331 AASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLP-DIKLRKLHEDSLGMNRTID 507
+ K + E Q ++ K ++E AL E+ TT+ ++K+R + D NR +
Sbjct: 496 SMKQK---VMEFDAQMTEQDKELHE-ALNSRKELETTVEEMNVKIRSIERD----NRGLK 547
Query: 508 DKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDLLG*VR 654
+ DL+R++ E + + + +K + ELND L +R
Sbjct: 548 VEKEDLERVLQEAGEKVASQQKELKEAHGQRKLAMAEFSELNDKLADMR 596
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 33.1 bits (72), Expect = 0.58
Identities = 31/155 (20%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Frame = +1
Query: 172 SXAEKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNA-ASGKL 348
S E + R I A + + + N+ A + ++ N + ++N AS K+
Sbjct: 715 SQEEASQEVNREINQEASQMVKQAQI-NQGASQEVNREINQETSQMVKQAQINQEASQKV 773
Query: 349 S-SINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHE-DSLGMNRTIDDKAAD 522
+ IN+ A Q +K+A++ E + + E+N +K ++++ S +NR I+ +A+
Sbjct: 774 NREINQEASQMVKQAQINQEASQEVNREINQETSQMVKQAQINQVASQEVNREINQEASQ 833
Query: 523 LDRLIAENEDTLKGLDEAI-KRGRDLLEQGHDRQD 624
+ + N++ + ++ I + +++Q Q+
Sbjct: 834 MVKQAQINQEASQEVNREINQEASQMVKQAQINQE 868
Score = 33.1 bits (72), Expect = 0.58
Identities = 25/128 (19%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Frame = +1
Query: 253 NKIAKDGITKQANISNEVQILTNELN-AASGKLS-SINELADQALKRAKVVYEEALGLYA 426
N+ A + ++ N + ++N AS +++ IN+ A Q +K+A++ E + +
Sbjct: 791 NQEASQEVNREINQETSQMVKQAQINQVASQEVNREINQEASQMVKQAQINQEASQEVNR 850
Query: 427 EVNTTLLPDIKLRKLHED-SLGMNRTIDDKAADLDRLIAENEDTLKGLDEAI-KRGRDLL 600
E+N +K +++++ S +NR I+ +A+ + + N++ + ++ I + ++
Sbjct: 851 EINQEASQMVKQAQINQEASQEVNREINQEASQMVKQAQINQEASQEVNREINQEASQMV 910
Query: 601 EQGHDRQD 624
+Q Q+
Sbjct: 911 KQAQINQE 918
Score = 32.3 bits (70), Expect = 1.0
Identities = 25/128 (19%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +1
Query: 253 NKIAKDGITKQANISNEVQILTNELN-AASGKLS-SINELADQALKRAKVVYEEALGLYA 426
N+ A + ++ N + ++N AS +++ IN+ A Q +K+A++ E + +
Sbjct: 916 NQEASQEVNREINQEASQMVKQAQINQGASQEVNREINQEASQMVKQAQINQEASQEVNR 975
Query: 427 EVNTTLLPDIKLRKLHED-SLGMNRTIDDKAADLDRLIAENEDTLKGLDEAI-KRGRDLL 600
E+N +K ++++ S NR I+ +A+ + + + N++ + ++ I + ++
Sbjct: 976 EINQEASQMVKQAQINQGASQEFNREINQEASQMVKQVQINQEASQEVNREINQEASQMV 1035
Query: 601 EQGHDRQD 624
+Q Q+
Sbjct: 1036 KQAQINQE 1043
Score = 30.7 bits (66), Expect = 3.1
Identities = 25/128 (19%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +1
Query: 253 NKIAKDGITKQANISNEVQILTNELNA-ASGKLS-SINELADQALKRAKVVYEEALGLYA 426
N+ A + ++ N + ++N AS +++ IN+ A Q +K+A++ E + +
Sbjct: 841 NQEASQEVNREINQEASQMVKQAQINQEASQEVNREINQEASQMVKQAQINQEASQEVNR 900
Query: 427 EVNTTLLPDIKLRKLHED-SLGMNRTIDDKAADLDRLIAENEDTLKGLDEAI-KRGRDLL 600
E+N +K +++++ S +NR I+ +A+ + + N+ + ++ I + ++
Sbjct: 901 EINQEASQMVKQAQINQEASQEVNREINQEASQMVKQAQINQGASQEVNREINQEASQMV 960
Query: 601 EQGHDRQD 624
+Q Q+
Sbjct: 961 KQAQINQE 968
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 355 INELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHED-SLGMNRTIDDKAADLDR 531
IN+ A Q +K+A++ E + + E+N +K ++++ S +NR I+ KA+ + +
Sbjct: 1027 INQEASQMVKQAQINQEASQKVNREINQETSQMVKQAQINQGASQEVNREINQKASQMVK 1086
Query: 532 LIAENEDTLKGLDEAIKR 585
N++ + ++ I +
Sbjct: 1087 PAQINQEASQEVNREINQ 1104
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 32.7 bits (71), Expect = 0.77
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +1
Query: 289 NISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRK 468
N+SN+V+ + NEL + K + + A +R+K + L E + D+ + K
Sbjct: 667 NVSNQVEKVVNELKSLKKKHEELENSSKGAERRSKEAEKRIENLEQECASA--NDMAMEK 724
Query: 469 LHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDE 573
E S + RTI+ K +D+L EN + + L E
Sbjct: 725 SVELS-RLKRTIEKK---IDKLTKENSELRRKLGE 755
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 32.7 bits (71), Expect = 0.77
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 382 KRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIAENEDTLK 561
K K ++ L+ ++ L K R + E + R I DKA + R I + + +
Sbjct: 29 KELKAKFKREEKLHRDIIDKALQQSKYRDIIEKARSKYRDIIDKAQNKYRDIDKAQSKYR 88
Query: 562 GLDEAIKRGRDLLEQGHDRQDELND 636
+D+A + RD++E+ + ++ D
Sbjct: 89 DIDKAQSKYRDIIEKSRSKYRDIID 113
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 32.3 bits (70), Expect = 1.0
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +1
Query: 361 ELADQALKRAKVVYEEALGLYAEVNTTLLPDIK--LRKLHE---DSLGMN-RTIDDKAAD 522
E D++L + +E+L E TL ++ L LHE +SL + T+D+
Sbjct: 81 ETLDESLDESLETLDESLETLHESLETLQESLEKLLESLHESLDESLDESLETLDESLET 140
Query: 523 LDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELND 636
LD + +++L+ LDE++ + L++ D E D
Sbjct: 141 LDESLETLDESLETLDESLDESLETLDESLDESLETLD 178
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +1
Query: 466 KLHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDL 639
KLHEDSL + RTI D +D + E ++ KR +L + + NDL
Sbjct: 129 KLHEDSLEVKRTIGDLESDYKMSMDEKDNAHNEAKNTAKRVFELESKLAQSEQARNDL 186
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 31.5 bits (68), Expect = 1.8
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 8/175 (4%)
Frame = +1
Query: 178 AEKLENEARNIRDIADKAFN-TSXVANKIAKDGITKQANISNE-------VQILTNELNA 333
A KLE + R I+ ADK + I K +I N+ VQ+L + L
Sbjct: 802 ASKLEEDKRKIQQQADKRVSEMQDSITGIQKTAANAMDDIRNQLKEREERVQVLLSRLQQ 861
Query: 334 ASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDK 513
A + E A V+E + L A+ + K+ KL D MN K
Sbjct: 862 ADDDKKKLEETLATRHSTANKVHELQVQLKAKDDKVNNLQAKISKLEAD---MNEQQASK 918
Query: 514 AADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDLLG*VR*ATXSSEE 678
++E +D LK E+ + ++ +E ++ L L + AT S EE
Sbjct: 919 DITAQDRVSELKDLLKVSRESESKLQERIESLREKITGLE--LAAINDATASKEE 971
>SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43)
Length = 1402
Score = 31.1 bits (67), Expect = 2.3
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 184 KLENEARNIRDIADKAFNT--SXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSI 357
KL NE R R + + ++ + +Q ++ + I+ E+N + ++ ++
Sbjct: 77 KLNNEVREARSLLQQKEQEFYQQAEQEMRRVASEEQEKSNSRLNIILFEVNKLNVQVETL 136
Query: 358 N-ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRL 534
N ELA++ + + + +E L + L D ++ + E+ + + DDKA +LD+L
Sbjct: 137 NRELAEKD-SQLEELNKERTSLQEAIE---LRDREVSVVREEKIELATRYDDKAKELDQL 192
Query: 535 IAENEDTLKGLDEAIKRGRDL 597
ED L A ++ ++L
Sbjct: 193 ---KEDLLAKTGFAEEKSKEL 210
>SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 31.1 bits (67), Expect = 2.3
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 184 KLENEARNIRDIADKAFNT--SXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSI 357
KL NE R R + + ++ + +Q ++ + I+ E+N + ++ ++
Sbjct: 383 KLNNEVREARSLLQQKEQEFYQQAEQEMRRVASEEQEKSNSRLNIILFEVNKLNVQVETL 442
Query: 358 N-ELADQALKRAKVVYEEALGLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRL 534
N ELA++ + + + +E L + L D ++ + E+ + + DDKA +LD+L
Sbjct: 443 NRELAEKD-SQLEELNKERTSLQEAIE---LRDREVSVVREEKIELATRYDDKAKELDQL 498
Query: 535 IAENEDTLKGLDEAIKRGRDL 597
ED L A ++ ++L
Sbjct: 499 ---KEDLLAKTGFAEEKSKEL 516
>SB_30634| Best HMM Match : Apolipoprotein (HMM E-Value=0.16)
Length = 558
Score = 31.1 bits (67), Expect = 2.3
Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Frame = +1
Query: 166 PDSXAEKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGK 345
P +++ + ++ + + + N ++ I + + E+ L NEL A K
Sbjct: 99 PVISGARIQEDLKHYKQQTETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNK 158
Query: 346 LSSINELADQALKRAKVVYEEALGLYAEVNTT--LLPDIK--LRKLHEDSLGMNRTIDD- 510
+ S+ + ++ + E G T ++ +K LRK E L + + IDD
Sbjct: 159 IESLQDELERMENEKTELRVELRGAERSTEATKGMMATMKEMLRKNDEQKLALQKYIDDL 218
Query: 511 --KAADLDRLIAENEDTLKGLDE 573
+ ++L + + + LK LD+
Sbjct: 219 ELENSELTSQLGRSLENLKQLDQ 241
>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3133
Score = 30.7 bits (66), Expect = 3.1
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 322 ELNAASGKLS-SINELADQALKRAKVVYEEALGLYAEVNTTLLPDI-KLRKLHEDSLGMN 495
E++AA L S +++ D + + Y L + E + +L ++ K++ L +D
Sbjct: 2299 EISAALVALGVSASDIHDLKTRPGETAYVRLLKDWGESDVDILQEVSKVQNLVQDVGQHV 2358
Query: 496 RTIDDKAADLDRLIAEN-EDTLKGLDEAIK 582
+++D+K D+D+ +A+ ++ KG+ E K
Sbjct: 2359 QSVDEKVQDIDQNVAKGFQNIQKGIQEIKK 2388
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 30.7 bits (66), Expect = 3.1
Identities = 27/131 (20%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Frame = +1
Query: 190 ENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINELA 369
++E + RD ++ S + +T+ + +++ILT + + GKL + E
Sbjct: 680 KDEIKTARDTINEYKEISARNHHERDKMMTRLKELETQMEILTRQASEYRGKLVDVEEKP 739
Query: 370 DQALKRAKVVYEEAL-GLYAEVNTTLLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIAEN 546
R + V+ E + +AE P I R ++ NR + KA +L++ + +
Sbjct: 740 ----SRVREVHSELVENTFAEEAQIEPPSIDKRSRVKELEDENREVKRKAEELEKSLNDK 795
Query: 547 EDTLKGLDEAI 579
L +E +
Sbjct: 796 NLKLAASEEKV 806
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 353 LLNLPEA-AFSSFVNICTSLLMLACFVIPSLAILFATXEVLNALSAISLMFLASFSNFSA 177
L++LP + + N T+L + +PS + L A+ ALSA SLM L S S+ A
Sbjct: 169 LMSLPSTPSLEASSNTPTALSATSLMSLPSTSSLEASSNTPTALSATSLMSLPSTSSLKA 228
Query: 176 XES 168
+
Sbjct: 229 SSN 231
Score = 29.9 bits (64), Expect = 5.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 353 LLNLPEAA-FSSFVNICTSLLMLACFVIPSLAILFATXEVLNALSAISLMFLASFSNFSA 177
L++LP + + N T+L + +PS L A+ ALSA SLM L S S+ A
Sbjct: 145 LMSLPSTSNLKASSNTPTALSTTSLMSLPSTPSLEASSNTPTALSATSLMSLPSTSSLEA 204
Query: 176 XES 168
+
Sbjct: 205 SSN 207
>SB_58655| Best HMM Match : Flotillin (HMM E-Value=1.1)
Length = 183
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 496 RTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELNDLLG*VR*ATXSSE 675
+ I + DLD+L A N GL+ KR +D+ E H R++EL ++ +R ++E
Sbjct: 26 KEITTQLEDLDKLKARNA----GLE---KRLKDMEEYSHQRENELTSVVSQLRMDLHTAE 78
Query: 676 ER 681
ER
Sbjct: 79 ER 80
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +1
Query: 460 LRKLHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDLL 600
+R L D GM++ ID +LD++++E ++ + + E + ++L+
Sbjct: 412 IRTLEHDKKGMHQNIDRLKRELDKVLSERQELQERVSELEGKSQELM 458
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 30.3 bits (65), Expect = 4.1
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +1
Query: 259 IAKDGITKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNT 438
I + I+ A++ + L +LN A+ L + D+A + +K E L + NT
Sbjct: 572 IMEKRISSGASVEKDNIRLQVQLNDATKDLEKTRKKLDEANEASKKAISEKSVLQSRHNT 631
Query: 439 TLLPDIKLRKLHEDSLGMNRTIDDKAADL----DRLIAENEDTLKGLDEAIKRGRDLLEQ 606
L+ KL+ E + + + +L RL E + +L+ D + +L+ +
Sbjct: 632 LLVEMEKLQISVERTEDEKTVLQGEKNNLINKNKRLQKEIDASLEDADRLSEENTNLVAE 691
Query: 607 GHDRQDELNDLL 642
++ LNDLL
Sbjct: 692 NKRLRNRLNDLL 703
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 5.4
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +1
Query: 277 TKQANIS---NEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLL 447
T QA ++ N++Q L + ++ ++ D+ K E L A+++
Sbjct: 1365 TSQAKLNEKDNQIQQLLTSKDFLEDEIDNLKAAIDKTEK-------EKEDLKADIDELKA 1417
Query: 448 PDIKLRKLHED-SLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQD 624
+IKL KL D G+ RT + DR+ ENE +K ++ + L + ++
Sbjct: 1418 ENIKLNKLINDMEAGIKRT----QTESDRIAFENESNVKKIESLENQITALKKNEQSNKE 1473
Query: 625 ELNDL 639
++N+L
Sbjct: 1474 KINEL 1478
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 5.4
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 286 ANISNEVQILTNELN-AASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDIK 459
A + E Q N AA GKL S++E + L+R EE L Y + N L D+K
Sbjct: 527 ARLREEEQNADNRKRVAAGGKLKSVSEEEQKRLEREIREQEELLKGYQQENERLYRDLK 585
>SB_5515| Best HMM Match : PspA_IM30 (HMM E-Value=0.14)
Length = 388
Score = 29.9 bits (64), Expect = 5.4
Identities = 27/143 (18%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Frame = +1
Query: 166 PDSXAEKLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGK 345
P +++ + ++ + + + N ++ I + + E+ L NEL A +
Sbjct: 109 PVISGARIQEDLKHYKQQTETLESLFAAVNHNNENLINENLLLQAELDNLNNELKAKDNR 168
Query: 346 LSSINELADQALKRAKVVYEEALGLYAEVNTT--LLPDIK--LRKLHEDSLGMNRTIDD- 510
+ S+ + ++ + E G T ++ +K LRK E L + + IDD
Sbjct: 169 IESLQDELERMENEKTELRVELRGAEKSTEATKGMMATMKEMLRKNDEQKLALQKYIDDL 228
Query: 511 --KAADLDRLIAENEDTLKGLDE 573
+ ++L + + + LK LD+
Sbjct: 229 ELENSELTSQLGRSLENLKQLDQ 251
>SB_27931| Best HMM Match : Filament (HMM E-Value=0.028)
Length = 428
Score = 29.5 bits (63), Expect = 7.2
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 265 KDGITKQANISNEVQILTNELNAASGKLS-SINELADQALKRAKVVYEEALGLYAEVNTT 441
K+ + K +N SNE ++ EL KLS +NEL ++ + ++ + +TT
Sbjct: 165 KNSLDKASNFSNETKVKVEELKNDKQKLSKKVNELKEELSRE-----QQMRSSLEQSHTT 219
Query: 442 LLPDIKLRKLHEDSLGMNRTIDDKAADLDRLIAENED 552
LL + M+R ++ + D+ L AE ++
Sbjct: 220 LLQRVN---------DMDRVVETERGDVQALAAECQE 247
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 29.1 bits (62), Expect = 9.5
Identities = 31/161 (19%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Frame = +1
Query: 184 KLENEARNIRDIADKAFNTSXVANKIAKDGITKQANISNEVQILTNELNAASGKLSSINE 363
K +E N+RD +KA + + +I + + NE+ + +L+A +
Sbjct: 1154 KEASEVANLRDALEKANSKVAHSEEILALKAARLKELVNELDKMKKDLDAQKQAIEESRS 1213
Query: 364 LADQALKRAKVVYEEALGLYAEVNTTLLPDIK-LRKLHEDSLGMNRTIDDKAADLDRLIA 540
+ + +E+ +++ TL K L K H +++ + + + +
Sbjct: 1214 EESGIIGEMEEKLKESKDKISKLEGTLNDKAKALEKAHLSLKEAETKLEEMSTNNVKAVE 1273
Query: 541 ENED---TLKGL----DEAIKRGRDLLEQGHDRQDELNDLL 642
E+ + +LK L D+A+++ + L++ +R ELN L
Sbjct: 1274 ESNEKITSLKALINQKDDALEKIKASLKEAEERFQELNRTL 1314
>SB_539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 29.1 bits (62), Expect = 9.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 344 LPEAAFSSFVNICTSLLMLACFV 276
+P+ ++++CTSLL+L CF+
Sbjct: 79 IPDVLSLQYLSVCTSLLLLVCFL 101
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 29.1 bits (62), Expect = 9.5
Identities = 32/120 (26%), Positives = 54/120 (45%)
Frame = +1
Query: 277 TKQANISNEVQILTNELNAASGKLSSINELADQALKRAKVVYEEALGLYAEVNTTLLPDI 456
T + +E++ L +EL +S K+S Q LK K + L E + L+ D+
Sbjct: 123 TSIGRLESELRSLKSELQNSSEKISEDEHEISQ-LKNDKARCMQELRDEREKSNKLVVDL 181
Query: 457 KLRKLHEDSLGMNRTIDDKAADLDRLIAENEDTLKGLDEAIKRGRDLLEQGHDRQDELND 636
+ + +D D ++ + E T+K LD +K DL +Q DR +ELN+
Sbjct: 182 QKTRKAQD-------------DCEKEVNRCEATIKTLDSNLK---DLRQQVADRDEELNN 225
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,215,313
Number of Sequences: 59808
Number of extensions: 411338
Number of successful extensions: 935
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4777275239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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